RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 SMIM29Q86T20 159 aa10.58□□□□□ -0.72
CDC42EP1-203ENST00000430687 LINC00304Q8N9R0 145 aa10.57□□□□□ -0.72
CDC42EP1-203ENST00000430687 Q8NBF4 154 aa10.57□□□□□ -0.72
CDC42EP1-203ENST00000430687 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
CDC42EP1-203ENST00000430687 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
CDC42EP1-203ENST00000430687 DNAL4O96015 105 aa10.55□□□□□ -0.72
CDC42EP1-203ENST00000430687 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
CDC42EP1-203ENST00000430687 H3BQ85 93 aa10.54□□□□□ -0.72
CDC42EP1-203ENST00000430687 TRACP01848 142 aa10.54□□□□□ -0.72
CDC42EP1-203ENST00000430687 LST1O00453 97 aa10.53□□□□□ -0.72
CDC42EP1-203ENST00000430687 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
CDC42EP1-203ENST00000430687 C4orf48Q5BLP8 95 aa10.52□□□□□ -0.73
CDC42EP1-203ENST00000430687 C9orf118A6NHY6 69 aa10.51□□□□□ -0.73
CDC42EP1-203ENST00000430687 PCP4L1A6NKN8 68 aa10.51□□□□□ -0.73
CDC42EP1-203ENST00000430687 F8WEM9 126 aa10.51□□□□□ -0.73
CDC42EP1-203ENST00000430687 NAA38Q9BRA0 125 aaKnown RBP10.51□□□□□ -0.73
CDC42EP1-203ENST00000430687 HERC1Q15751 4861 aa10.5□□□□□ -0.73
CDC42EP1-203ENST00000430687 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
CDC42EP1-203ENST00000430687 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
CDC42EP1-203ENST00000430687 H3BUT2 72 aa10.49□□□□□ -0.73
CDC42EP1-203ENST00000430687 SPINK1P00995 79 aa10.49□□□□□ -0.73
CDC42EP1-203ENST00000430687 COL5A1-AS1Q5SY13 56 aa10.49□□□□□ -0.73
CDC42EP1-203ENST00000430687 IGLV8-61A0A075B6I0 122 aa10.48□□□□□ -0.73
CDC42EP1-203ENST00000430687 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
CDC42EP1-203ENST00000430687 TRBV20-1A0A075B6N2 111 aa10.47□□□□□ -0.73
CDC42EP1-203ENST00000430687 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.73
CDC42EP1-203ENST00000430687 TCL1BO95988 128 aa10.46□□□□□ -0.73
CDC42EP1-203ENST00000430687 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.73
CDC42EP1-203ENST00000430687 FABP2P12104 132 aa10.45□□□□□ -0.74
CDC42EP1-203ENST00000430687 NDUFV3P56181 108 aaKnown RBP10.45□□□□□ -0.74
CDC42EP1-203ENST00000430687 Q6JHZ5 121 aa10.45□□□□□ -0.74
CDC42EP1-203ENST00000430687 A0A1W2PPM0 123 aa10.44□□□□□ -0.74
CDC42EP1-203ENST00000430687 CD164Q04900 197 aa10.44□□□□□ -0.74
CDC42EP1-203ENST00000430687 UBE2V1Q13404 147 aa10.41□□□□□ -0.74
CDC42EP1-203ENST00000430687 H3BMG7 143 aa10.38□□□□□ -0.75
CDC42EP1-203ENST00000430687 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
CDC42EP1-203ENST00000430687 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
CDC42EP1-203ENST00000430687 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
CDC42EP1-203ENST00000430687 HRCT1Q6UXD1 115 aa10.35□□□□□ -0.75
CDC42EP1-203ENST00000430687 A0A0G2JQZ4 141 aa10.34□□□□□ -0.75
CDC42EP1-203ENST00000430687 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
CDC42EP1-203ENST00000430687 Q5XG85 94 aa10.33□□□□□ -0.76
CDC42EP1-203ENST00000430687 C9JAW5 83 aa10.32□□□□□ -0.76
CDC42EP1-203ENST00000430687 SPCS1Q9Y6A9 102 aa10.32□□□□□ -0.76
CDC42EP1-203ENST00000430687 Q6Q795 121 aa10.31□□□□□ -0.76
CDC42EP1-203ENST00000430687 PRR4Q16378 134 aa10.29□□□□□ -0.76
CDC42EP1-203ENST00000430687 TEN1Q86WV5 123 aa10.29□□□□□ -0.76
CDC42EP1-203ENST00000430687 TRBV7-7A0A0K0K1E9 115 aa10.28□□□□□ -0.76
CDC42EP1-203ENST00000430687 H3BT86 120 aa10.28□□□□□ -0.76
CDC42EP1-203ENST00000430687 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
CDC42EP1-203ENST00000430687 FP248Q71RG6 208 aaPredicted RBP10.28□□□□□ -0.76
CDC42EP1-203ENST00000430687 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
CDC42EP1-203ENST00000430687 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
CDC42EP1-203ENST00000430687 HMCN2Q8NDA2 5059 aa10.26□□□□□ -0.77
CDC42EP1-203ENST00000430687 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
CDC42EP1-203ENST00000430687 K7EP34 96 aa10.24□□□□□ -0.77
CDC42EP1-203ENST00000430687 DSCR8Q96T75 97 aa10.24□□□□□ -0.77
CDC42EP1-203ENST00000430687 A0A1B0GV72 72 aa10.23□□□□□ -0.77
CDC42EP1-203ENST00000430687 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
CDC42EP1-203ENST00000430687 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
CDC42EP1-203ENST00000430687 A0A1W2PNM2 257 aa10.21□□□□□ -0.77
CDC42EP1-203ENST00000430687 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
CDC42EP1-203ENST00000430687 OBSCN-AS1Q96MR7 158 aa10.2□□□□□ -0.78
CDC42EP1-203ENST00000430687 SS18L2Q9UHA2 77 aa10.2□□□□□ -0.78
CDC42EP1-203ENST00000430687 CCKP06307 115 aa10.19□□□□□ -0.78
CDC42EP1-203ENST00000430687 PDE6GP18545 87 aa10.19□□□□□ -0.78
CDC42EP1-203ENST00000430687 LOC110117498A0A087WWA1 95 aa10.17□□□□□ -0.78
CDC42EP1-203ENST00000430687 C1orf195Q5TG92 126 aa10.17□□□□□ -0.78
CDC42EP1-203ENST00000430687 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
CDC42EP1-203ENST00000430687 A0A087WSZ3 146 aa10.16□□□□□ -0.78
CDC42EP1-203ENST00000430687 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
CDC42EP1-203ENST00000430687 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
CDC42EP1-203ENST00000430687 Q6ZQT0 140 aa10.14□□□□□ -0.79
CDC42EP1-203ENST00000430687 PRO0461Q9UI25 63 aa10.14□□□□□ -0.79
CDC42EP1-203ENST00000430687 A0A1B0GW54 56 aa10.13□□□□□ -0.79
CDC42EP1-203ENST00000430687 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP1-203ENST00000430687 C14orf132Q9NPU4 83 aa10.12□□□□□ -0.79
CDC42EP1-203ENST00000430687 F8W1H4 67 aa10.11□□□□□ -0.79
CDC42EP1-203ENST00000430687 VPS25Q9BRG1 176 aa10.11□□□□□ -0.79
CDC42EP1-203ENST00000430687 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
CDC42EP1-203ENST00000430687 CDIP1Q9H305 208 aa10.05□□□□□ -0.8
CDC42EP1-203ENST00000430687 Q96NJ1 140 aa10.03□□□□□ -0.8
CDC42EP1-203ENST00000430687 LINC00472Q9H8W2 130 aa10.01□□□□□ -0.81
CDC42EP1-203ENST00000430687 LRP2P98164 4655 aa9.98□□□□□ -0.81
CDC42EP1-203ENST00000430687 LPAP08519 4548 aa9.98□□□□□ -0.81
CDC42EP1-203ENST00000430687 A0A1B0GV90 55 aa9.96□□□□□ -0.82
CDC42EP1-203ENST00000430687 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
CDC42EP1-203ENST00000430687 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
CDC42EP1-203ENST00000430687 J3KT08 172 aa9.94□□□□□ -0.82
CDC42EP1-203ENST00000430687 C9orf92A6NGG3 77 aa9.93□□□□□ -0.82
CDC42EP1-203ENST00000430687 NREPQ16612 68 aa9.92□□□□□ -0.82
CDC42EP1-203ENST00000430687 XP32Q5T750 250 aa9.92□□□□□ -0.82
CDC42EP1-203ENST00000430687 SIGMAR1Q99720 223 aa9.92□□□□□ -0.82
CDC42EP1-203ENST00000430687 UBR4Q5T4S7 5183 aa9.92□□□□□ -0.82
CDC42EP1-203ENST00000430687 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
CDC42EP1-203ENST00000430687 NDUFB1O75438 58 aa9.83□□□□□ -0.84
CDC42EP1-203ENST00000430687 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
CDC42EP1-203ENST00000430687 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
CDC42EP1-203ENST00000430687 LINC00313P59037 77 aa9.82□□□□□ -0.84
CDC42EP1-203ENST00000430687 A8MWP4 228 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms