RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 IGSF10Q6WRI0 2623 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 USP24Q9UPU5 2620 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 LOC400499M0QZD8 3231 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 NCOR2Q9Y618 2525 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 TRBV7-4A0A0J9YYF1 115 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 J3KT08 172 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 HTN3P15516 51 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 NPC2P61916 151 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 HRCT1Q6UXD1 115 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 SERP2Q8N6R1 65 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 C6orf48Q9UBA6 75 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 DMXL2Q8TDJ6 3036 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 HIVEP2P31629 2446 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 MYO15AQ9UKN7 3530 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 SPRR1AP35321 89 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 KRTAP21-3Q3LHN1 58 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 Q6ZRX8 168 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 UBE2DNLQ8IWF7 75 aa2.09□□□□□ -2.07
NUDCD1-202ENST00000427660 MUC3AQ02505 3323 aa2.09□□□□□ -2.08
NUDCD1-202ENST00000427660 SPTBN4Q9H254 2564 aa2.09□□□□□ -2.08
NUDCD1-202ENST00000427660 KALRNO60229 2985 aa2.09□□□□□ -2.08
NUDCD1-202ENST00000427660 IGLV5-48A0A075B6I7 105 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 NDUFB1O75438 58 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 ZCCHC13Q8WW36 166 aaKnown RBP2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 ZNF462Q96JM2 2506 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 SPTAN1Q13813 2472 aaKnown RBP2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 CFAP47Q6ZTR5 3102 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 USP9XQ93008 2570 aaPredicted RBP2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 FAM236AA0A1B0GUQ0 79 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 FAM236BA0A1B0GV22 79 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 C9orf153Q5TBE3 101 aa2.08□□□□□ -2.08
NUDCD1-202ENST00000427660 MYO18BQ8IUG5 2567 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 BOD1L1Q8NFC6 3051 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 NCR3O14931 201 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 KRTAP26-1Q6PEX3 210 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 UNQ6190/PRO20217Q6UXQ8 127 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 Q6ZQY7 126 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 FN1P02751 2386 aaKnown RBP2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 ZFHX4Q86UP3 3567 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 CSPG4Q6UVK1 2322 aa2.07□□□□□ -2.08
NUDCD1-202ENST00000427660 SPRR1BP22528 89 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 ROMO1P60602 79 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 CLPSL2Q6UWE3 100 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 WFDC10BQ8IUB3 73 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 SPRR4Q96PI1 79 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 CFAP46Q8IYW2 2715 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 KLKP1Q107X0 134 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 NREPQ16612 68 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 SMR3AQ99954 134 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 RETNLBQ9BQ08 111 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 DMDP11532 3685 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 ITPR3Q14573 2671 aa2.06□□□□□ -2.08
NUDCD1-202ENST00000427660 LRBAP50851 2863 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 CHD8Q9HCK8 2581 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 BAHCC1Q9P281 2608 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 SORL1Q92673 2214 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 COA5Q86WW8 74 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 NBASA2RRP1 2371 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 USP9YO00507 2555 aaPredicted RBP2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 SPENQ96T58 3664 aaKnown RBP2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 FP248Q71RG6 208 aaPredicted RBP2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 DEFB104AQ8WTQ1 72 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 LINC00846Q9NV44 126 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 SPEGQ15772 3267 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 CELSR3Q9NYQ7 3312 aa2.05□□□□□ -2.08
NUDCD1-202ENST00000427660 LRRK2Q5S007 2527 aa2.04□□□□□ -2.08
NUDCD1-202ENST00000427660 APCP25054 2843 aa2.04□□□□□ -2.08
NUDCD1-202ENST00000427660 Q6ZRN7 208 aaPredicted RBP2.04□□□□□ -2.08
NUDCD1-202ENST00000427660 PTPN13Q12923 2485 aa2.04□□□□□ -2.08
NUDCD1-202ENST00000427660 K7EIL1 84 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 C1orf137Q5JT78 98 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 TP53AIP1Q9HCN2 124 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 APLNQ9ULZ1 77 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 C22orf24Q9Y442 160 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 DCHS1Q96JQ0 3298 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 UTP20O75691 2785 aaKnown RBP2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 NBDYA0A0U1RRE5 68 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 DEFB4AO15263 64 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 HAMPP81172 84 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 TMEM254Q8TBM7 123 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 PDZD2O15018 2839 aa2.03□□□□□ -2.08
NUDCD1-202ENST00000427660 FLNAP21333 2647 aaKnown RBP2.03□□□□□ -2.09
NUDCD1-202ENST00000427660 DCHS2Q6V1P9 2916 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 FBN2P35556 2912 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 NBEAQ8NFP9 2946 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 SERP1Q9Y6X1 66 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 M0R2N4 97 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 C9orf116Q5BN46 136 aaPredicted RBP2.02□□□□□ -2.09
NUDCD1-202ENST00000427660 SPG11Q96JI7 2443 aa2.01□□□□□ -2.09
NUDCD1-202ENST00000427660 UNC79Q9P2D8 2635 aa2.01□□□□□ -2.09
NUDCD1-202ENST00000427660 MYO9AB2RTY4 2548 aa2.01□□□□□ -2.09
NUDCD1-202ENST00000427660 CELSR1Q9NYQ6 3014 aa2.01□□□□□ -2.09
NUDCD1-202ENST00000427660 hDV103S1A0JD37 113 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms