RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
RBM39-208ENST00000416108 CRYGAP11844 174 aa5.04□□□□□ -1.6
RBM39-208ENST00000416108 C3orf22Q8N5N4 141 aa5.04□□□□□ -1.6
RBM39-208ENST00000416108 PRO0461Q9UI25 63 aa5.04□□□□□ -1.6
RBM39-208ENST00000416108 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
RBM39-208ENST00000416108 A0A1B0GV72 72 aa5.03□□□□□ -1.6
RBM39-208ENST00000416108 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
RBM39-208ENST00000416108 SMIM29Q86T20 159 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 Q8NBF4 154 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 ANAPC11Q9NYG5 84 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
RBM39-208ENST00000416108 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
RBM39-208ENST00000416108 SMCPP49901 116 aaPredicted RBP5.01□□□□□ -1.61
RBM39-208ENST00000416108 MOBPQ13875 183 aa5.01□□□□□ -1.61
RBM39-208ENST00000416108 Q6JHZ5 121 aa5.01□□□□□ -1.61
RBM39-208ENST00000416108 TEN1Q86WV5 123 aa5.01□□□□□ -1.61
RBM39-208ENST00000416108 C21orf62-AS1Q17RA5 79 aa5□□□□□ -1.61
RBM39-208ENST00000416108 TYMSOSQ8TAI1 123 aa5□□□□□ -1.61
RBM39-208ENST00000416108 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
RBM39-208ENST00000416108 HSPG2P98160 4391 aa5□□□□□ -1.61
RBM39-208ENST00000416108 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
RBM39-208ENST00000416108 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
RBM39-208ENST00000416108 IGLV8-61A0A075B6I0 122 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 A0A087X002 238 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 PDE6GP18545 87 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 PRR26Q8N8Z3 221 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 VPS25Q9BRG1 176 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
RBM39-208ENST00000416108 C4orf48Q5BLP8 95 aa4.97□□□□□ -1.61
RBM39-208ENST00000416108 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
RBM39-208ENST00000416108 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 FAT1Q14517 4588 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 LOC110117498A0A087WWA1 95 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 IGFL1Q6UW32 110 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.62
RBM39-208ENST00000416108 TRBV7-4A0A0J9YYF1 115 aa4.95□□□□□ -1.62
RBM39-208ENST00000416108 CCKP06307 115 aa4.95□□□□□ -1.62
RBM39-208ENST00000416108 J3QR89 54 aa4.94□□□□□ -1.62
RBM39-208ENST00000416108 OXTP01178 125 aa4.94□□□□□ -1.62
RBM39-208ENST00000416108 HRCT1Q6UXD1 115 aa4.94□□□□□ -1.62
RBM39-208ENST00000416108 Q6ZQT0 140 aa4.94□□□□□ -1.62
RBM39-208ENST00000416108 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
RBM39-208ENST00000416108 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
RBM39-208ENST00000416108 SPAG11AQ6PDA7 123 aa4.93□□□□□ -1.62
RBM39-208ENST00000416108 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
RBM39-208ENST00000416108 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
RBM39-208ENST00000416108 CD164Q04900 197 aa4.92□□□□□ -1.62
RBM39-208ENST00000416108 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
RBM39-208ENST00000416108 Q6Q795 121 aa4.91□□□□□ -1.62
RBM39-208ENST00000416108 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
RBM39-208ENST00000416108 SS18L2Q9UHA2 77 aa4.91□□□□□ -1.62
RBM39-208ENST00000416108 SRRM2Q9UQ35 2752 aaKnown RBP4.9□□□□□ -1.62
RBM39-208ENST00000416108 TRBV7-7A0A0K0K1E9 115 aa4.9□□□□□ -1.63
RBM39-208ENST00000416108 A0A1B0GW54 56 aa4.9□□□□□ -1.63
RBM39-208ENST00000416108 SPINK1P00995 79 aa4.9□□□□□ -1.63
RBM39-208ENST00000416108 A0A087WSZ3 146 aa4.89□□□□□ -1.63
RBM39-208ENST00000416108 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
RBM39-208ENST00000416108 J3QL48 77 aa4.89□□□□□ -1.63
RBM39-208ENST00000416108 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
RBM39-208ENST00000416108 HERC2O95714 4834 aa4.89□□□□□ -1.63
RBM39-208ENST00000416108 K7ERU9 68 aa4.88□□□□□ -1.63
RBM39-208ENST00000416108 ACYP1P07311 99 aa4.88□□□□□ -1.63
RBM39-208ENST00000416108 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
RBM39-208ENST00000416108 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
RBM39-208ENST00000416108 UBL5Q9BZL1 73 aa4.87□□□□□ -1.63
RBM39-208ENST00000416108 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
RBM39-208ENST00000416108 NREPQ16612 68 aa4.85□□□□□ -1.63
RBM39-208ENST00000416108 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
RBM39-208ENST00000416108 Q5XG85 94 aa4.83□□□□□ -1.64
RBM39-208ENST00000416108 ASB16-AS1Q495Z4 193 aa4.82□□□□□ -1.64
RBM39-208ENST00000416108 Q6ZVQ6 151 aa4.82□□□□□ -1.64
RBM39-208ENST00000416108 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
RBM39-208ENST00000416108 J3KT08 172 aa4.81□□□□□ -1.64
RBM39-208ENST00000416108 SIGMAR1Q99720 223 aa4.81□□□□□ -1.64
RBM39-208ENST00000416108 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
RBM39-208ENST00000416108 DMBT1Q9UGM3 2413 aaPredicted RBP4.8□□□□□ -1.64
RBM39-208ENST00000416108 BPY2O14599 106 aa4.8□□□□□ -1.64
RBM39-208ENST00000416108 IGKV4-1P06312 121 aa4.8□□□□□ -1.64
RBM39-208ENST00000416108 LRP1Q07954 4544 aaKnown RBP4.78□□□□□ -1.64
RBM39-208ENST00000416108 NDUFB1O75438 58 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
RBM39-208ENST00000416108 CXCL6P80162 114 aa4.76□□□□□ -1.65
RBM39-208ENST00000416108 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
RBM39-208ENST00000416108 Q96NJ1 140 aa4.76□□□□□ -1.65
RBM39-208ENST00000416108 TNXBP22105 4242 aa4.76□□□□□ -1.65
RBM39-208ENST00000416108 IGKV3D-7A0A0C4DH55 119 aa4.75□□□□□ -1.65
RBM39-208ENST00000416108 PRR4Q16378 134 aa4.75□□□□□ -1.65
RBM39-208ENST00000416108 A8MWP4 228 aa4.74□□□□□ -1.65
RBM39-208ENST00000416108 CDIP1Q9H305 208 aa4.74□□□□□ -1.65
RBM39-208ENST00000416108 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
RBM39-208ENST00000416108 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
RBM39-208ENST00000416108 IGHV6-1A0A0B4J1U7 121 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms