RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 SPRR1BP22528 89 aa5.8□□□□□ -1.48
RIF1-202ENST00000414861 Q8N1X5 172 aa5.8□□□□□ -1.48
RIF1-202ENST00000414861 LINC01600Q96MT4 127 aa5.8□□□□□ -1.48
RIF1-202ENST00000414861 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
RIF1-202ENST00000414861 SPINK6Q6UWN8 80 aa5.79□□□□□ -1.48
RIF1-202ENST00000414861 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
RIF1-202ENST00000414861 ZNF706Q9Y5V0 76 aaPredicted RBP5.79□□□□□ -1.48
RIF1-202ENST00000414861 ETDBQ3ZM63 59 aa5.78□□□□□ -1.48
RIF1-202ENST00000414861 PPDPFLQ8WWR9 84 aa5.78□□□□□ -1.48
RIF1-202ENST00000414861 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
RIF1-202ENST00000414861 HERC2O95714 4834 aa5.78□□□□□ -1.48
RIF1-202ENST00000414861 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
RIF1-202ENST00000414861 LAMTOR3Q9UHA4 124 aa5.77□□□□□ -1.49
RIF1-202ENST00000414861 H3BQ85 93 aa5.77□□□□□ -1.49
RIF1-202ENST00000414861 GHRHP01286 108 aa5.76□□□□□ -1.49
RIF1-202ENST00000414861 A0A087X002 238 aa5.76□□□□□ -1.49
RIF1-202ENST00000414861 TEN1Q86WV5 123 aa5.76□□□□□ -1.49
RIF1-202ENST00000414861 OBSCN-AS1Q96MR7 158 aa5.75□□□□□ -1.49
RIF1-202ENST00000414861 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
RIF1-202ENST00000414861 IGLV9-49A0A0B4J1Y8 123 aa5.75□□□□□ -1.49
RIF1-202ENST00000414861 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
RIF1-202ENST00000414861 A0A0G2JQZ4 141 aa5.74□□□□□ -1.49
RIF1-202ENST00000414861 C14orf132Q9NPU4 83 aa5.74□□□□□ -1.49
RIF1-202ENST00000414861 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
RIF1-202ENST00000414861 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
RIF1-202ENST00000414861 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
RIF1-202ENST00000414861 F8WEM9 126 aa5.73□□□□□ -1.49
RIF1-202ENST00000414861 RBM3P98179 157 aaKnown RBP5.72□□□□□ -1.49
RIF1-202ENST00000414861 MOBPQ13875 183 aa5.72□□□□□ -1.49
RIF1-202ENST00000414861 JMJD7-PLA2G4BH0Y9G9 81 aa5.72□□□□□ -1.49
RIF1-202ENST00000414861 FAM229BQ4G0N7 80 aa5.72□□□□□ -1.49
RIF1-202ENST00000414861 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
RIF1-202ENST00000414861 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.5
RIF1-202ENST00000414861 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
RIF1-202ENST00000414861 TRBV7-4A0A0J9YYF1 115 aa5.71□□□□□ -1.5
RIF1-202ENST00000414861 IGFL1Q6UW32 110 aa5.7□□□□□ -1.5
RIF1-202ENST00000414861 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
RIF1-202ENST00000414861 CRYGAP11844 174 aa5.7□□□□□ -1.5
RIF1-202ENST00000414861 Q8NBF4 154 aa5.7□□□□□ -1.5
RIF1-202ENST00000414861 DSCR8Q96T75 97 aa5.69□□□□□ -1.5
RIF1-202ENST00000414861 TNXBP22105 4242 aa5.69□□□□□ -1.5
RIF1-202ENST00000414861 Q6ZQT0 140 aa5.69□□□□□ -1.5
RIF1-202ENST00000414861 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
RIF1-202ENST00000414861 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
RIF1-202ENST00000414861 CCKP06307 115 aa5.66□□□□□ -1.5
RIF1-202ENST00000414861 Q6JHZ5 121 aa5.66□□□□□ -1.5
RIF1-202ENST00000414861 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
RIF1-202ENST00000414861 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
RIF1-202ENST00000414861 HRCT1Q6UXD1 115 aa5.64□□□□□ -1.51
RIF1-202ENST00000414861 SSBP3-AS1Q7Z2R9 100 aa5.64□□□□□ -1.51
RIF1-202ENST00000414861 PDE6GP18545 87 aa5.63□□□□□ -1.51
RIF1-202ENST00000414861 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
RIF1-202ENST00000414861 Q6Q795 121 aa5.61□□□□□ -1.51
RIF1-202ENST00000414861 DMBT1Q9UGM3 2413 aaPredicted RBP5.61□□□□□ -1.51
RIF1-202ENST00000414861 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
RIF1-202ENST00000414861 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
RIF1-202ENST00000414861 A0A087WSZ3 146 aa5.6□□□□□ -1.51
RIF1-202ENST00000414861 TRBV7-7A0A0K0K1E9 115 aa5.6□□□□□ -1.51
RIF1-202ENST00000414861 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
RIF1-202ENST00000414861 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
RIF1-202ENST00000414861 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
RIF1-202ENST00000414861 CD164Q04900 197 aa5.58□□□□□ -1.52
RIF1-202ENST00000414861 J3QR89 54 aa5.57□□□□□ -1.52
RIF1-202ENST00000414861 K7ERU9 68 aa5.57□□□□□ -1.52
RIF1-202ENST00000414861 C21orf62-AS1Q17RA5 79 aa5.56□□□□□ -1.52
RIF1-202ENST00000414861 OXTP01178 125 aa5.56□□□□□ -1.52
RIF1-202ENST00000414861 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
RIF1-202ENST00000414861 A0A1B0GW54 56 aa5.54□□□□□ -1.52
RIF1-202ENST00000414861 KRTAP29-1A8MX34 341 aaPredicted RBP5.54□□□□□ -1.52
RIF1-202ENST00000414861 SPINK1P00995 79 aa5.54□□□□□ -1.52
RIF1-202ENST00000414861 ACYP1P07311 99 aa5.54□□□□□ -1.52
RIF1-202ENST00000414861 Q6ZVQ6 151 aa5.54□□□□□ -1.52
RIF1-202ENST00000414861 SPAG11AQ6PDA7 123 aa5.53□□□□□ -1.52
RIF1-202ENST00000414861 CDIP1Q9H305 208 aa5.53□□□□□ -1.52
RIF1-202ENST00000414861 Q96NJ1 140 aa5.52□□□□□ -1.53
RIF1-202ENST00000414861 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
RIF1-202ENST00000414861 NREPQ16612 68 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 Q5XG85 94 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 UBL5Q9BZL1 73 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 LIMD2Q9BT23 127 aa5.51□□□□□ -1.53
RIF1-202ENST00000414861 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
RIF1-202ENST00000414861 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
RIF1-202ENST00000414861 C1orf195Q5TG92 126 aa5.49□□□□□ -1.53
RIF1-202ENST00000414861 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
RIF1-202ENST00000414861 J3QL48 77 aa5.47□□□□□ -1.53
RIF1-202ENST00000414861 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.53
RIF1-202ENST00000414861 IGKV4-1P06312 121 aa5.46□□□□□ -1.54
RIF1-202ENST00000414861 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
RIF1-202ENST00000414861 BPY2O14599 106 aa5.45□□□□□ -1.54
RIF1-202ENST00000414861 DSCR10P59022 87 aa5.45□□□□□ -1.54
RIF1-202ENST00000414861 SIGMAR1Q99720 223 aa5.45□□□□□ -1.54
RIF1-202ENST00000414861 Q8N9L7 120 aa5.45□□□□□ -1.54
RIF1-202ENST00000414861 MT-ATP8P03928 68 aa5.44□□□□□ -1.54
RIF1-202ENST00000414861 CXCL6P80162 114 aa5.43□□□□□ -1.54
RIF1-202ENST00000414861 K7EQZ3 153 aa5.42□□□□□ -1.54
RIF1-202ENST00000414861 ATP5EP2Q5VTU8 51 aa5.42□□□□□ -1.54
RIF1-202ENST00000414861 HERC1Q15751 4861 aa5.42□□□□□ -1.54
RIF1-202ENST00000414861 J3KT08 172 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms