RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
SMARCA4-202ENST00000413806 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
SMARCA4-202ENST00000413806 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
SMARCA4-202ENST00000413806 CEP350Q5VT06 3117 aa8.31□□□□□ -1.08
SMARCA4-202ENST00000413806 Q6ZSA8 131 aa8.3□□□□□ -1.08
SMARCA4-202ENST00000413806 ITPR3Q14573 2671 aa8.3□□□□□ -1.08
SMARCA4-202ENST00000413806 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
SMARCA4-202ENST00000413806 USP24Q9UPU5 2620 aa8.28□□□□□ -1.08
SMARCA4-202ENST00000413806 MAST4O15021 2626 aa8.27□□□□□ -1.08
SMARCA4-202ENST00000413806 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
SMARCA4-202ENST00000413806 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
SMARCA4-202ENST00000413806 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
SMARCA4-202ENST00000413806 ATRQ13535 2644 aa8.22□□□□□ -1.09
SMARCA4-202ENST00000413806 C5orf42Q9H799 3197 aa8.22□□□□□ -1.09
SMARCA4-202ENST00000413806 S4R3F8 94 aa8.21□□□□□ -1.1
SMARCA4-202ENST00000413806 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
SMARCA4-202ENST00000413806 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
SMARCA4-202ENST00000413806 UTRNP46939 3433 aa8.18□□□□□ -1.1
SMARCA4-202ENST00000413806 Q6ZR54 194 aa8.16□□□□□ -1.1
SMARCA4-202ENST00000413806 TRANK1O15050 2925 aa8.16□□□□□ -1.1
SMARCA4-202ENST00000413806 HELZ2Q9BYK8 2649 aaKnown RBP8.16□□□□□ -1.1
SMARCA4-202ENST00000413806 HTTP42858 3142 aa8.15□□□□□ -1.11
SMARCA4-202ENST00000413806 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
SMARCA4-202ENST00000413806 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
SMARCA4-202ENST00000413806 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
SMARCA4-202ENST00000413806 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
SMARCA4-202ENST00000413806 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
SMARCA4-202ENST00000413806 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
SMARCA4-202ENST00000413806 A8MU10 97 aa8.06□□□□□ -1.12
SMARCA4-202ENST00000413806 PANO1I0J062 215 aa8.05□□□□□ -1.12
SMARCA4-202ENST00000413806 R4GN34 69 aa8.04□□□□□ -1.12
SMARCA4-202ENST00000413806 SETXQ7Z333 2677 aaKnown RBP8.03□□□□□ -1.12
SMARCA4-202ENST00000413806 LCE6AA0A183 80 aa8.03□□□□□ -1.12
SMARCA4-202ENST00000413806 ZNF292O60281 2723 aa8.02□□□□□ -1.13
SMARCA4-202ENST00000413806 Q5VSD8 79 aa8□□□□□ -1.13
SMARCA4-202ENST00000413806 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
SMARCA4-202ENST00000413806 PCNTO95613 3336 aa7.96□□□□□ -1.14
SMARCA4-202ENST00000413806 M0R2T5 61 aa7.94□□□□□ -1.14
SMARCA4-202ENST00000413806 A0A087X002 238 aa7.93□□□□□ -1.14
SMARCA4-202ENST00000413806 MGAQ8IWI9 3026 aa7.93□□□□□ -1.14
SMARCA4-202ENST00000413806 M0QZ58 72 aa7.93□□□□□ -1.14
SMARCA4-202ENST00000413806 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
SMARCA4-202ENST00000413806 CENPEQ02224 2701 aa7.92□□□□□ -1.14
SMARCA4-202ENST00000413806 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
SMARCA4-202ENST00000413806 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
SMARCA4-202ENST00000413806 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
SMARCA4-202ENST00000413806 CHD6Q8TD26 2715 aa7.89□□□□□ -1.15
SMARCA4-202ENST00000413806 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
SMARCA4-202ENST00000413806 AKAP13Q12802 2813 aa7.88□□□□□ -1.15
SMARCA4-202ENST00000413806 RANBP2P49792 3224 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-202ENST00000413806 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
SMARCA4-202ENST00000413806 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
SMARCA4-202ENST00000413806 TEP1Q99973 2627 aaKnown RBP7.87□□□□□ -1.15
SMARCA4-202ENST00000413806 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
SMARCA4-202ENST00000413806 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
SMARCA4-202ENST00000413806 CFAP54Q96N23 3096 aa7.84□□□□□ -1.15
SMARCA4-202ENST00000413806 A0A0C4DFX4 3053 aa7.83□□□□□ -1.16
SMARCA4-202ENST00000413806 A8MUU9 505 aa7.83□□□□□ -1.16
SMARCA4-202ENST00000413806 UNC79Q9P2D8 2635 aa7.81□□□□□ -1.16
SMARCA4-202ENST00000413806 MKI67P46013 3256 aaKnown RBP7.8□□□□□ -1.16
SMARCA4-202ENST00000413806 TEX15Q9BXT5 2789 aa7.8□□□□□ -1.16
SMARCA4-202ENST00000413806 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
SMARCA4-202ENST00000413806 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.17
SMARCA4-202ENST00000413806 IGSF10Q6WRI0 2623 aa7.76□□□□□ -1.17
SMARCA4-202ENST00000413806 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
SMARCA4-202ENST00000413806 LAMA3Q16787 3333 aa7.73□□□□□ -1.17
SMARCA4-202ENST00000413806 BAHCC1Q9P281 2608 aa7.7□□□□□ -1.18
SMARCA4-202ENST00000413806 COL6A5A8TX70 2615 aa7.7□□□□□ -1.18
SMARCA4-202ENST00000413806 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
SMARCA4-202ENST00000413806 WDFY4Q6ZS81 3184 aa7.66□□□□□ -1.18
SMARCA4-202ENST00000413806 DSPP15924 2871 aaKnown RBP7.65□□□□□ -1.18
SMARCA4-202ENST00000413806 NOTCH1P46531 2555 aa7.65□□□□□ -1.19
SMARCA4-202ENST00000413806 LAMA2P24043 3122 aaKnown RBP7.63□□□□□ -1.19
SMARCA4-202ENST00000413806 TRIOO75962 3097 aa7.62□□□□□ -1.19
SMARCA4-202ENST00000413806 FRYQ5TBA9 3013 aa7.59□□□□□ -1.19
SMARCA4-202ENST00000413806 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
SMARCA4-202ENST00000413806 KMT2BQ9UMN6 2715 aaPredicted RBP7.58□□□□□ -1.2
SMARCA4-202ENST00000413806 BRCA2P51587 3418 aa7.57□□□□□ -1.2
SMARCA4-202ENST00000413806 NSD1Q96L73 2696 aaPredicted RBP7.56□□□□□ -1.2
SMARCA4-202ENST00000413806 ITPR2Q14571 2701 aa7.55□□□□□ -1.2
SMARCA4-202ENST00000413806 UBR5O95071 2799 aaPredicted RBP7.54□□□□□ -1.2
SMARCA4-202ENST00000413806 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
SMARCA4-202ENST00000413806 PRUNE2Q8WUY3 3088 aa7.52□□□□□ -1.21
SMARCA4-202ENST00000413806 VPS13AQ96RL7 3174 aa7.5□□□□□ -1.21
SMARCA4-202ENST00000413806 KRTAP21-3Q3LHN1 58 aa7.5□□□□□ -1.21
SMARCA4-202ENST00000413806 UNC80Q8N2C7 3258 aa7.5□□□□□ -1.21
SMARCA4-202ENST00000413806 ITPR1Q14643 2758 aa7.48□□□□□ -1.21
SMARCA4-202ENST00000413806 MAP1AP78559 2803 aaPredicted RBP7.45□□□□□ -1.22
SMARCA4-202ENST00000413806 CDH23Q9H251 3354 aa7.42□□□□□ -1.22
SMARCA4-202ENST00000413806 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
SMARCA4-202ENST00000413806 H0YAA0 97 aa7.41□□□□□ -1.22
SMARCA4-202ENST00000413806 TNP1P09430 55 aa7.41□□□□□ -1.22
SMARCA4-202ENST00000413806 XIRP2A4UGR9 3374 aa7.41□□□□□ -1.22
SMARCA4-202ENST00000413806 P0C880 135 aa7.41□□□□□ -1.22
SMARCA4-202ENST00000413806 KALRNO60229 2985 aa7.41□□□□□ -1.22
SMARCA4-202ENST00000413806 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.22
SMARCA4-202ENST00000413806 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
SMARCA4-202ENST00000413806 FLNCQ14315 2725 aa7.38□□□□□ -1.23
SMARCA4-202ENST00000413806 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SMARCA4-202ENST00000413806 UTP20O75691 2785 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms