RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PREX2Q70Z35 1606 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 FMN2Q9NZ56 1722 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 TNCP24821 2201 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 LRBAP50851 2863 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 GAFA1Q96PS6 74 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 CNFNQ9BYD5 112 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 TP53AIP1Q9HCN2 124 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 BIRC6Q9NR09 4857 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 PTPRQQ9UMZ3 2332 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 ABCA6Q8N139 1617 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 USP34Q70CQ2 3546 aa0.89□□□□□ -2.27
HMGB3P31-201ENST00000413333 NIPBLQ6KC79 2804 aaeCLIP0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 DMBT1Q9UGM3 2413 aaPredicted RBP0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 EPPK1P58107 5090 aaKnown RBP0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 STAB2Q8WWQ8 2551 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 A0A0D9SFI3 127 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 COX7BP24311 80 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 NREPQ16612 68 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 WFDC9Q8NEX5 89 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 RYR2Q92736 4967 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 KMT2CQ8NEZ4 4911 aaKnown RBP0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
HMGB3P31-201ENST00000413333 NWD1Q149M9 1564 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 CSMD3Q7Z407 3707 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 DCHS1Q96JQ0 3298 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 H3BVH4 76 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 WNK1Q9H4A3 2382 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
HMGB3P31-201ENST00000413333 BIVM-ERCC5R4GMW8 1640 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 XIRP2A4UGR9 3374 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 FXYD6-FXYD2A0A087WZ82 144 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 PLXNC1O60486 1568 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 GLI2P10070 1586 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 NF1P21359 2839 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 TJP1Q07157 1748 aa0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 PRRC2CQ9Y520 2896 aaKnown RBP0.86□□□□□ -2.27
HMGB3P31-201ENST00000413333 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 KIF1AQ12756 1690 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 ALS2Q96Q42 1657 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 K7EQZ3 153 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 C3orf79P0CE67 100 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 COX6A2Q02221 97 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 ABCA13Q86UQ4 5058 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 ACANP16112 2415 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
HMGB3P31-201ENST00000413333 DDX60LQ5H9U9 1706 aaKnown RBP0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 PRUNE2Q8WUY3 3088 aa0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 CPSF4LA6NMK7 179 aaKnown RBP0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 SFTA3P0C7M3 94 aa0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 ATXN8Q156A1 80 aa0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 PIGYQ3MUY2 71 aa0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 PRO0255Q9UI72 69 aa0.84□□□□□ -2.27
HMGB3P31-201ENST00000413333 RNF17Q9BXT8 1623 aaKnown RBP0.84□□□□□ -2.28
HMGB3P31-201ENST00000413333 BSNQ9UPA5 3926 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 DSPP15924 2871 aaKnown RBP0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 TNRC6CQ9HCJ0 1690 aaKnown RBP0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 LY75O60449 1722 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 MAST1Q9Y2H9 1570 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 NEBP20929 6669 aa0.83□□□□□ -2.28
HMGB3P31-201ENST00000413333 HERC1Q15751 4861 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 Q8IZM0 81 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 USMG5Q96IX5 58 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 GNG13Q9P2W3 67 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 CDH23Q9H251 3354 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 ABCC6O95255 1503 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 ABCA10Q8WWZ4 1543 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
HMGB3P31-201ENST00000413333 ITSN2Q9NZM3 1697 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 SMG1Q96Q15 3661 aaKnown RBP0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 DCHS2Q6V1P9 2916 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 NBASA2RRP1 2371 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 LOC400499M0QZD8 3231 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 NDUFA4O00483 81 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 RPL38P63173 70 aaKnown RBP0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 CRIPTQ9P021 101 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 FREM2Q5SZK8 3169 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 LAMA3Q16787 3333 aa0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
HMGB3P31-201ENST00000413333 DNAH14Q0VDD8 3507 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 CENPEQ02224 2701 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 MROH2AA6NES4 1674 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 C3P01024 1663 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 FRAS1Q86XX4 4008 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 KNL1Q8NG31 2342 aa0.8□□□□□ -2.28
HMGB3P31-201ENST00000413333 NBPF19A0A087WUL8 3843 aa0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 Q5VSD8 79 aa0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 EEA1Q15075 1411 aa0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 PRXQ9BXM0 1461 aa0.79□□□□□ -2.28
HMGB3P31-201ENST00000413333 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
HMGB3P31-201ENST00000413333 CROCC2H7BZ55 1655 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms