RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ASPMQ8IZT6 3477 aa8.79□□□□□ -1
CLTCL1-201ENST00000412649 CSMD1Q96PZ7 3565 aa8.78□□□□□ -1
CLTCL1-201ENST00000412649 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
CLTCL1-201ENST00000412649 SMG1Q96Q15 3661 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-201ENST00000412649 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
CLTCL1-201ENST00000412649 K7ERS5 55 aa8.75□□□□□ -1.01
CLTCL1-201ENST00000412649 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
CLTCL1-201ENST00000412649 ASH1LQ9NR48 2969 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-201ENST00000412649 MDFIQ99750 246 aa8.74□□□□□ -1.01
CLTCL1-201ENST00000412649 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
CLTCL1-201ENST00000412649 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
CLTCL1-201ENST00000412649 UQCR11O14957 56 aa8.73□□□□□ -1.01
CLTCL1-201ENST00000412649 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
CLTCL1-201ENST00000412649 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
CLTCL1-201ENST00000412649 SPINK1P00995 79 aa8.72□□□□□ -1.01
CLTCL1-201ENST00000412649 ATRQ13535 2644 aa8.72□□□□□ -1.01
CLTCL1-201ENST00000412649 A8MU10 97 aa8.71□□□□□ -1.01
CLTCL1-201ENST00000412649 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.01
CLTCL1-201ENST00000412649 IGLV8-61A0A075B6I0 122 aa8.71□□□□□ -1.02
CLTCL1-201ENST00000412649 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
CLTCL1-201ENST00000412649 SPINK7P58062 85 aa8.7□□□□□ -1.02
CLTCL1-201ENST00000412649 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-201ENST00000412649 DMDP11532 3685 aa8.69□□□□□ -1.02
CLTCL1-201ENST00000412649 KRTAP1-1Q07627 177 aa8.69□□□□□ -1.02
CLTCL1-201ENST00000412649 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
CLTCL1-201ENST00000412649 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
CLTCL1-201ENST00000412649 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
CLTCL1-201ENST00000412649 FLNCQ14315 2725 aa8.68□□□□□ -1.02
CLTCL1-201ENST00000412649 ZANQ9Y493 2812 aa8.68□□□□□ -1.02
CLTCL1-201ENST00000412649 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
CLTCL1-201ENST00000412649 HRES1P13985 223 aa8.67□□□□□ -1.02
CLTCL1-201ENST00000412649 LY6G6CO95867 125 aa8.66□□□□□ -1.02
CLTCL1-201ENST00000412649 PRAC1Q96KF2 57 aa8.66□□□□□ -1.02
CLTCL1-201ENST00000412649 LINC00313P59037 77 aa8.65□□□□□ -1.02
CLTCL1-201ENST00000412649 NUPR2A6NF83 97 aa8.65□□□□□ -1.02
CLTCL1-201ENST00000412649 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-201ENST00000412649 A6NN06 94 aa8.64□□□□□ -1.03
CLTCL1-201ENST00000412649 FAM229AH3BQW9 127 aa8.64□□□□□ -1.03
CLTCL1-201ENST00000412649 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
CLTCL1-201ENST00000412649 KRTAP10-11P60412 298 aa8.63□□□□□ -1.03
CLTCL1-201ENST00000412649 UTP20O75691 2785 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-201ENST00000412649 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
CLTCL1-201ENST00000412649 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
CLTCL1-201ENST00000412649 SPRR1BP22528 89 aa8.59□□□□□ -1.03
CLTCL1-201ENST00000412649 CFAP46Q8IYW2 2715 aa8.58□□□□□ -1.04
CLTCL1-201ENST00000412649 LAMA5O15230 3695 aa8.56□□□□□ -1.04
CLTCL1-201ENST00000412649 RELNP78509 3460 aa8.56□□□□□ -1.04
CLTCL1-201ENST00000412649 APCP25054 2843 aa8.55□□□□□ -1.04
CLTCL1-201ENST00000412649 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
CLTCL1-201ENST00000412649 FBN2P35556 2912 aa8.54□□□□□ -1.04
CLTCL1-201ENST00000412649 H3BS24 57 aa8.53□□□□□ -1.04
CLTCL1-201ENST00000412649 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.04
CLTCL1-201ENST00000412649 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.04
CLTCL1-201ENST00000412649 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
CLTCL1-201ENST00000412649 Q6ZR54 194 aa8.51□□□□□ -1.05
CLTCL1-201ENST00000412649 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
CLTCL1-201ENST00000412649 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
CLTCL1-201ENST00000412649 MUC3AQ02505 3323 aa8.5□□□□□ -1.05
CLTCL1-201ENST00000412649 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
CLTCL1-201ENST00000412649 MXRA5Q9NR99 2828 aa8.48□□□□□ -1.05
CLTCL1-201ENST00000412649 NF1P21359 2839 aa8.48□□□□□ -1.05
CLTCL1-201ENST00000412649 ZNF861PO60384 105 aa8.48□□□□□ -1.05
CLTCL1-201ENST00000412649 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
CLTCL1-201ENST00000412649 CELSR1Q9NYQ6 3014 aa8.47□□□□□ -1.05
CLTCL1-201ENST00000412649 SVEP1Q4LDE5 3571 aa8.46□□□□□ -1.06
CLTCL1-201ENST00000412649 SPACA4Q8TDM5 124 aa8.46□□□□□ -1.06
CLTCL1-201ENST00000412649 RTL8CO15255 209 aa8.44□□□□□ -1.06
CLTCL1-201ENST00000412649 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
CLTCL1-201ENST00000412649 HELZ2Q9BYK8 2649 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-201ENST00000412649 UBR5O95071 2799 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-201ENST00000412649 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
CLTCL1-201ENST00000412649 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
CLTCL1-201ENST00000412649 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-201ENST00000412649 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
CLTCL1-201ENST00000412649 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
CLTCL1-201ENST00000412649 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.07
CLTCL1-201ENST00000412649 K7EIL1 84 aa8.39□□□□□ -1.07
CLTCL1-201ENST00000412649 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-201ENST00000412649 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
CLTCL1-201ENST00000412649 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
CLTCL1-201ENST00000412649 MAST4O15021 2626 aa8.36□□□□□ -1.07
CLTCL1-201ENST00000412649 Q96NJ1 140 aa8.36□□□□□ -1.07
CLTCL1-201ENST00000412649 CELSR2Q9HCU4 2923 aa8.36□□□□□ -1.07
CLTCL1-201ENST00000412649 Q5W150 140 aa8.35□□□□□ -1.07
CLTCL1-201ENST00000412649 NOTCH1P46531 2555 aa8.35□□□□□ -1.07
CLTCL1-201ENST00000412649 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
CLTCL1-201ENST00000412649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-201ENST00000412649 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
CLTCL1-201ENST00000412649 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
CLTCL1-201ENST00000412649 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
CLTCL1-201ENST00000412649 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
CLTCL1-201ENST00000412649 A0A087WTM6 91 aa8.31□□□□□ -1.08
CLTCL1-201ENST00000412649 APLNQ9ULZ1 77 aa8.31□□□□□ -1.08
CLTCL1-201ENST00000412649 COL6A5A8TX70 2615 aa8.3□□□□□ -1.08
CLTCL1-201ENST00000412649 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
CLTCL1-201ENST00000412649 Q8N1X5 172 aa8.3□□□□□ -1.08
CLTCL1-201ENST00000412649 A0A087X002 238 aa8.29□□□□□ -1.08
CLTCL1-201ENST00000412649 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
CLTCL1-201ENST00000412649 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
CLTCL1-201ENST00000412649 NBEAL1Q6ZS30 2694 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 744.3 ms