RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
PTPN3-203ENST00000412145 RPS29P62273 56 aaKnown RBP4.52□□□□□ -1.69
PTPN3-203ENST00000412145 M0QZ58 72 aa4.52□□□□□ -1.69
PTPN3-203ENST00000412145 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
PTPN3-203ENST00000412145 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
PTPN3-203ENST00000412145 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
PTPN3-203ENST00000412145 STAB1Q9NY15 2570 aa4.51□□□□□ -1.69
PTPN3-203ENST00000412145 OXTP01178 125 aa4.5□□□□□ -1.69
PTPN3-203ENST00000412145 PANO1I0J062 215 aa4.48□□□□□ -1.69
PTPN3-203ENST00000412145 AKAP13Q12802 2813 aa4.48□□□□□ -1.69
PTPN3-203ENST00000412145 DMBT1Q9UGM3 2413 aaPredicted RBP4.48□□□□□ -1.69
PTPN3-203ENST00000412145 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
PTPN3-203ENST00000412145 PCNTO95613 3336 aa4.47□□□□□ -1.69
PTPN3-203ENST00000412145 BPTFQ12830 3046 aa4.47□□□□□ -1.69
PTPN3-203ENST00000412145 DNAH12Q6ZR08 3092 aa4.46□□□□□ -1.69
PTPN3-203ENST00000412145 MAST4O15021 2626 aa4.46□□□□□ -1.7
PTPN3-203ENST00000412145 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
PTPN3-203ENST00000412145 HECTD1Q9ULT8 2610 aa4.44□□□□□ -1.7
PTPN3-203ENST00000412145 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
PTPN3-203ENST00000412145 CENPEQ02224 2701 aa4.44□□□□□ -1.7
PTPN3-203ENST00000412145 KRTAP26-1Q6PEX3 210 aa4.43□□□□□ -1.7
PTPN3-203ENST00000412145 FLNAP21333 2647 aaKnown RBP4.43□□□□□ -1.7
PTPN3-203ENST00000412145 ATRQ13535 2644 aa4.43□□□□□ -1.7
PTPN3-203ENST00000412145 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
PTPN3-203ENST00000412145 CEP350Q5VT06 3117 aa4.43□□□□□ -1.7
PTPN3-203ENST00000412145 KMT2BQ9UMN6 2715 aaPredicted RBP4.42□□□□□ -1.7
PTPN3-203ENST00000412145 FLNBO75369 2602 aaKnown RBP4.4□□□□□ -1.7
PTPN3-203ENST00000412145 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
PTPN3-203ENST00000412145 A6NN06 94 aa4.39□□□□□ -1.71
PTPN3-203ENST00000412145 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
PTPN3-203ENST00000412145 C5orf42Q9H799 3197 aa4.36□□□□□ -1.71
PTPN3-203ENST00000412145 LCE6AA0A183 80 aa4.35□□□□□ -1.71
PTPN3-203ENST00000412145 C20orf166-AS1Q96NR2 134 aa4.35□□□□□ -1.71
PTPN3-203ENST00000412145 Q5VSD8 79 aa4.34□□□□□ -1.71
PTPN3-203ENST00000412145 Q8NDZ9 215 aa4.34□□□□□ -1.71
PTPN3-203ENST00000412145 CFAP46Q8IYW2 2715 aa4.34□□□□□ -1.72
PTPN3-203ENST00000412145 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.72
PTPN3-203ENST00000412145 ITPR3Q14573 2671 aa4.33□□□□□ -1.72
PTPN3-203ENST00000412145 TNP1P09430 55 aa4.33□□□□□ -1.72
PTPN3-203ENST00000412145 STAB2Q8WWQ8 2551 aa4.33□□□□□ -1.72
PTPN3-203ENST00000412145 HELZ2Q9BYK8 2649 aaKnown RBP4.33□□□□□ -1.72
PTPN3-203ENST00000412145 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
PTPN3-203ENST00000412145 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
PTPN3-203ENST00000412145 NOTCH1P46531 2555 aa4.31□□□□□ -1.72
PTPN3-203ENST00000412145 A8MUU9 505 aa4.29□□□□□ -1.72
PTPN3-203ENST00000412145 MKI67P46013 3256 aaKnown RBP4.27□□□□□ -1.73
PTPN3-203ENST00000412145 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
PTPN3-203ENST00000412145 CHD7Q9P2D1 2997 aa4.26□□□□□ -1.73
PTPN3-203ENST00000412145 GCN1Q92616 2671 aaKnown RBP4.24□□□□□ -1.73
PTPN3-203ENST00000412145 CHD6Q8TD26 2715 aa4.22□□□□□ -1.73
PTPN3-203ENST00000412145 UNC79Q9P2D8 2635 aa4.22□□□□□ -1.73
PTPN3-203ENST00000412145 COL6A5A8TX70 2615 aa4.21□□□□□ -1.74
PTPN3-203ENST00000412145 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
PTPN3-203ENST00000412145 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
PTPN3-203ENST00000412145 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
PTPN3-203ENST00000412145 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
PTPN3-203ENST00000412145 LAMA3Q16787 3333 aa4.17□□□□□ -1.74
PTPN3-203ENST00000412145 HTTP42858 3142 aa4.17□□□□□ -1.74
PTPN3-203ENST00000412145 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
PTPN3-203ENST00000412145 BRCA2P51587 3418 aa4.17□□□□□ -1.74
PTPN3-203ENST00000412145 Q6ZRN7 208 aaPredicted RBP4.17□□□□□ -1.74
PTPN3-203ENST00000412145 RANBP2P49792 3224 aaKnown RBP4.16□□□□□ -1.74
PTPN3-203ENST00000412145 PRUNE2Q8WUY3 3088 aa4.16□□□□□ -1.74
PTPN3-203ENST00000412145 TEP1Q99973 2627 aaKnown RBP4.14□□□□□ -1.75
PTPN3-203ENST00000412145 NSD1Q96L73 2696 aaPredicted RBP4.14□□□□□ -1.75
PTPN3-203ENST00000412145 XIRP2A4UGR9 3374 aa4.14□□□□□ -1.75
PTPN3-203ENST00000412145 MAP1AP78559 2803 aaPredicted RBP4.12□□□□□ -1.75
PTPN3-203ENST00000412145 TEX15Q9BXT5 2789 aa4.12□□□□□ -1.75
PTPN3-203ENST00000412145 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
PTPN3-203ENST00000412145 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
PTPN3-203ENST00000412145 A8MU10 97 aa4.1□□□□□ -1.75
PTPN3-203ENST00000412145 MGAQ8IWI9 3026 aa4.1□□□□□ -1.75
PTPN3-203ENST00000412145 SETXQ7Z333 2677 aaKnown RBP4.1□□□□□ -1.75
PTPN3-203ENST00000412145 BAHCC1Q9P281 2608 aa4.1□□□□□ -1.75
PTPN3-203ENST00000412145 LAMA2P24043 3122 aaKnown RBP4.1□□□□□ -1.75
PTPN3-203ENST00000412145 P0C880 135 aa4.09□□□□□ -1.75
PTPN3-203ENST00000412145 CHD9Q3L8U1 2897 aa4.09□□□□□ -1.76
PTPN3-203ENST00000412145 WDFY4Q6ZS81 3184 aa4.09□□□□□ -1.76
PTPN3-203ENST00000412145 A0A0C4DFX4 3053 aa4.08□□□□□ -1.76
PTPN3-203ENST00000412145 CFAP54Q96N23 3096 aa4.08□□□□□ -1.76
PTPN3-203ENST00000412145 KRTAP21-3Q3LHN1 58 aa4.08□□□□□ -1.76
PTPN3-203ENST00000412145 ZNF292O60281 2723 aa4.07□□□□□ -1.76
PTPN3-203ENST00000412145 ITPR1Q14643 2758 aa4.06□□□□□ -1.76
PTPN3-203ENST00000412145 APCP25054 2843 aa4.04□□□□□ -1.76
PTPN3-203ENST00000412145 ITPR2Q14571 2701 aa4.04□□□□□ -1.76
PTPN3-203ENST00000412145 IGSF10Q6WRI0 2623 aa4.04□□□□□ -1.76
PTPN3-203ENST00000412145 CDH23Q9H251 3354 aa4.04□□□□□ -1.76
PTPN3-203ENST00000412145 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
PTPN3-203ENST00000412145 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
PTPN3-203ENST00000412145 TRIOO75962 3097 aa4.01□□□□□ -1.77
PTPN3-203ENST00000412145 UNC80Q8N2C7 3258 aa4.01□□□□□ -1.77
PTPN3-203ENST00000412145 CELSR3Q9NYQ7 3312 aa3.99□□□□□ -1.77
PTPN3-203ENST00000412145 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
PTPN3-203ENST00000412145 SZT2Q5T011 3432 aa3.96□□□□□ -1.77
PTPN3-203ENST00000412145 DNAH14Q0VDD8 3507 aa3.96□□□□□ -1.78
PTPN3-203ENST00000412145 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
PTPN3-203ENST00000412145 FRYQ5TBA9 3013 aa3.95□□□□□ -1.78
PTPN3-203ENST00000412145 TRANK1O15050 2925 aa3.93□□□□□ -1.78
PTPN3-203ENST00000412145 H0YAA0 97 aa3.93□□□□□ -1.78
PTPN3-203ENST00000412145 SPTBN5Q9NRC6 3674 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms