RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
RGPD1-202ENST00000409776 Q6ZPA2 131 aa2.43□□□□□ -2.02
RGPD1-202ENST00000409776 SPTA1P02549 2419 aa2.43□□□□□ -2.02
RGPD1-202ENST00000409776 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
RGPD1-202ENST00000409776 COL5A1P20908 1838 aaPredicted RBP2.42□□□□□ -2.02
RGPD1-202ENST00000409776 A0A096LNT2 108 aa2.42□□□□□ -2.02
RGPD1-202ENST00000409776 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
RGPD1-202ENST00000409776 TCF20Q9UGU0 1960 aaKnown RBP2.41□□□□□ -2.02
RGPD1-202ENST00000409776 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
RGPD1-202ENST00000409776 GIG44P09565 113 aaPredicted RBP2.4□□□□□ -2.02
RGPD1-202ENST00000409776 GVINP1Q7Z2Y8 2422 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
RGPD1-202ENST00000409776 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.03
RGPD1-202ENST00000409776 Q5VSD8 79 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 WWC2-AS2Q96NR7 200 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 USF3Q68DE3 2245 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 PTPRBP23467 1997 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 ANK3Q12955 4377 aaKnown RBP2.39□□□□□ -2.03
RGPD1-202ENST00000409776 PRUNE2Q8WUY3 3088 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A1P02462 1669 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 ZNF462Q96JM2 2506 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A5P29400 1685 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 PLXNB3Q9ULL4 1909 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 CREBBPQ92793 2442 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 ADAMTS20P59510 1910 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 A0A0C4DFX4 3053 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 TRIOO75962 3097 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 LAMA1P25391 3075 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 SPTAN1Q13813 2472 aaKnown RBP2.37□□□□□ -2.03
RGPD1-202ENST00000409776 PRKDCP78527 4128 aaKnown RBP2.37□□□□□ -2.03
RGPD1-202ENST00000409776 INE1O15225 51 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A2P08572 1712 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 ABCA2Q9BZC7 2435 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 A0A087WTM6 91 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 LRP4O75096 1905 aa2.35□□□□□ -2.03
RGPD1-202ENST00000409776 CPAMD8Q8IZJ3 1885 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 ROS1P08922 2347 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 C2CD3Q4AC94 2353 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 LINC00472Q9H8W2 130 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 WDR87Q6ZQQ6 2873 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 SPRR1AP35321 89 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 NAV2Q8IVL1 2488 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 NCOR2Q9Y618 2525 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 DNAH1Q9P2D7 4330 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 K7EIL1 84 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 SPG11Q96JI7 2443 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 FRYLO94915 3013 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 C10orf142B7Z368 130 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
RGPD1-202ENST00000409776 HIVEP3Q5T1R4 2406 aa2.29□□□□□ -2.04
RGPD1-202ENST00000409776 CR1P17927 2039 aa2.29□□□□□ -2.04
RGPD1-202ENST00000409776 KRTAP29-1A8MX34 341 aaPredicted RBP2.28□□□□□ -2.04
RGPD1-202ENST00000409776 TRANK1O15050 2925 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 FRYQ5TBA9 3013 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 U3KQA8 63 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 DOPEY1Q5JWR5 2465 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 CHD9Q3L8U1 2897 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 Q6ZRN7 208 aaPredicted RBP2.26□□□□□ -2.05
RGPD1-202ENST00000409776 COL4A3Q01955 1670 aa2.25□□□□□ -2.05
RGPD1-202ENST00000409776 SMR3AQ99954 134 aa2.25□□□□□ -2.05
RGPD1-202ENST00000409776 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
RGPD1-202ENST00000409776 SONP18583 2426 aaKnown RBP2.24□□□□□ -2.05
RGPD1-202ENST00000409776 PIEZO1Q92508 2521 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 PKD1L2Q7Z442 2459 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 KRTAP12-2P59991 146 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 DMXL2Q8TDJ6 3036 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 ATMQ13315 3056 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 CELSR1Q9NYQ6 3014 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 CHD7Q9P2D1 2997 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 MYO9AB2RTY4 2548 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 PCSK5Q92824 1860 aa2.2□□□□□ -2.06
RGPD1-202ENST00000409776 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
RGPD1-202ENST00000409776 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
RGPD1-202ENST00000409776 H0YAA0 97 aa2.19□□□□□ -2.06
RGPD1-202ENST00000409776 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 LCE6AA0A183 80 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 MUC6Q6W4X9 2439 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
RGPD1-202ENST00000409776 ACANP16112 2415 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 ZZEF1O43149 2961 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 TNXBP22105 4242 aa2.16□□□□□ -2.06
RGPD1-202ENST00000409776 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-202ENST00000409776 DMXL1Q9Y485 3027 aa2.15□□□□□ -2.07
RGPD1-202ENST00000409776 FN1P02751 2386 aaKnown RBP2.15□□□□□ -2.07
RGPD1-202ENST00000409776 RIF1Q5UIP0 2472 aaKnown RBP2.14□□□□□ -2.07
RGPD1-202ENST00000409776 TPRXLQ17RH7 258 aa2.13□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
RGPD1-202ENST00000409776 ABCA12Q86UK0 2595 aa2.12□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms