RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ZNF706Q9Y5V0 76 aaPredicted RBP11.76□□□□□ -0.53
PDLIM2-205ENST00000397761 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
PDLIM2-205ENST00000397761 HSPG2P98160 4391 aa11.75□□□□□ -0.53
PDLIM2-205ENST00000397761 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
PDLIM2-205ENST00000397761 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
PDLIM2-205ENST00000397761 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
PDLIM2-205ENST00000397761 RBM3P98179 157 aaKnown RBP11.73□□□□□ -0.53
PDLIM2-205ENST00000397761 C14orf132Q9NPU4 83 aa11.71□□□□□ -0.53
PDLIM2-205ENST00000397761 ABCA13Q86UQ4 5058 aa11.7□□□□□ -0.54
PDLIM2-205ENST00000397761 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
PDLIM2-205ENST00000397761 LOC110117498A0A087WWA1 95 aa11.7□□□□□ -0.54
PDLIM2-205ENST00000397761 TRBV7-4A0A0J9YYF1 115 aa11.7□□□□□ -0.54
PDLIM2-205ENST00000397761 A0A1B0GV72 72 aa11.68□□□□□ -0.54
PDLIM2-205ENST00000397761 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
PDLIM2-205ENST00000397761 F8WEM9 126 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 J3QR89 54 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 K7ERU9 68 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 PDE6GP18545 87 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 Q6ZQT0 140 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 DSCR8Q96T75 97 aa11.65□□□□□ -0.54
PDLIM2-205ENST00000397761 FAT1Q14517 4588 aa11.62□□□□□ -0.55
PDLIM2-205ENST00000397761 CCKP06307 115 aa11.62□□□□□ -0.55
PDLIM2-205ENST00000397761 KRTAP1-4P0C5Y4 121 aa11.62□□□□□ -0.55
PDLIM2-205ENST00000397761 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
PDLIM2-205ENST00000397761 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
PDLIM2-205ENST00000397761 PLA2G1BP04054 148 aaKnown RBP11.61□□□□□ -0.55
PDLIM2-205ENST00000397761 FAM229BQ4G0N7 80 aa11.61□□□□□ -0.55
PDLIM2-205ENST00000397761 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
PDLIM2-205ENST00000397761 ANAPC11Q9NYG5 84 aa11.6□□□□□ -0.55
PDLIM2-205ENST00000397761 KRTAP17-1Q9BYP8 105 aa11.59□□□□□ -0.55
PDLIM2-205ENST00000397761 Q6JHZ5 121 aa11.58□□□□□ -0.56
PDLIM2-205ENST00000397761 IGFL1Q6UW32 110 aa11.57□□□□□ -0.56
PDLIM2-205ENST00000397761 Q5VSD8 79 aa11.57□□□□□ -0.56
PDLIM2-205ENST00000397761 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
PDLIM2-205ENST00000397761 IGLV9-49A0A0B4J1Y8 123 aa11.55□□□□□ -0.56
PDLIM2-205ENST00000397761 ACYP1P07311 99 aa11.55□□□□□ -0.56
PDLIM2-205ENST00000397761 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
PDLIM2-205ENST00000397761 A0A1W2PNM2 257 aa11.54□□□□□ -0.56
PDLIM2-205ENST00000397761 Q8N1X5 172 aa11.54□□□□□ -0.56
PDLIM2-205ENST00000397761 Q8NBF4 154 aa11.54□□□□□ -0.56
PDLIM2-205ENST00000397761 A0A087X002 238 aa11.52□□□□□ -0.56
PDLIM2-205ENST00000397761 MOBPQ13875 183 aa11.51□□□□□ -0.57
PDLIM2-205ENST00000397761 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
PDLIM2-205ENST00000397761 A0A0G2JQZ4 141 aa11.51□□□□□ -0.57
PDLIM2-205ENST00000397761 A0A1B0GW54 56 aa11.51□□□□□ -0.57
PDLIM2-205ENST00000397761 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
PDLIM2-205ENST00000397761 CRYGAP11844 174 aa11.5□□□□□ -0.57
PDLIM2-205ENST00000397761 Q6Q795 121 aa11.5□□□□□ -0.57
PDLIM2-205ENST00000397761 SSBP3-AS1Q7Z2R9 100 aa11.48□□□□□ -0.57
PDLIM2-205ENST00000397761 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
PDLIM2-205ENST00000397761 CDIP1Q9H305 208 aa11.46□□□□□ -0.57
PDLIM2-205ENST00000397761 LINC00846Q9NV44 126 aa11.46□□□□□ -0.57
PDLIM2-205ENST00000397761 CD164Q04900 197 aa11.39□□□□□ -0.59
PDLIM2-205ENST00000397761 TRBV7-7A0A0K0K1E9 115 aa11.38□□□□□ -0.59
PDLIM2-205ENST00000397761 PRR26Q8N8Z3 221 aa11.38□□□□□ -0.59
PDLIM2-205ENST00000397761 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
PDLIM2-205ENST00000397761 UBL5Q9BZL1 73 aa11.36□□□□□ -0.59
PDLIM2-205ENST00000397761 Q6ZVQ6 151 aa11.35□□□□□ -0.59
PDLIM2-205ENST00000397761 A0A087WSZ3 146 aa11.34□□□□□ -0.59
PDLIM2-205ENST00000397761 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
PDLIM2-205ENST00000397761 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
PDLIM2-205ENST00000397761 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
PDLIM2-205ENST00000397761 NREPQ16612 68 aa11.3□□□□□ -0.6
PDLIM2-205ENST00000397761 DMBT1Q9UGM3 2413 aaPredicted RBP11.28□□□□□ -0.6
PDLIM2-205ENST00000397761 MYCBP2O75592 4640 aa11.27□□□□□ -0.6
PDLIM2-205ENST00000397761 Q5XG85 94 aa11.27□□□□□ -0.6
PDLIM2-205ENST00000397761 SS18L2Q9UHA2 77 aa11.27□□□□□ -0.6
PDLIM2-205ENST00000397761 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
PDLIM2-205ENST00000397761 ATP5EP2Q5VTU8 51 aa11.25□□□□□ -0.61
PDLIM2-205ENST00000397761 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
PDLIM2-205ENST00000397761 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
PDLIM2-205ENST00000397761 LINC00472Q9H8W2 130 aa11.24□□□□□ -0.61
PDLIM2-205ENST00000397761 SPINK1P00995 79 aa11.23□□□□□ -0.61
PDLIM2-205ENST00000397761 MT-ATP8P03928 68 aa11.23□□□□□ -0.61
PDLIM2-205ENST00000397761 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
PDLIM2-205ENST00000397761 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
PDLIM2-205ENST00000397761 RPS29P62273 56 aaKnown RBP11.22□□□□□ -0.61
PDLIM2-205ENST00000397761 CXCL6P80162 114 aa11.22□□□□□ -0.61
PDLIM2-205ENST00000397761 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
PDLIM2-205ENST00000397761 Q96NJ1 140 aa11.21□□□□□ -0.61
PDLIM2-205ENST00000397761 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
PDLIM2-205ENST00000397761 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
PDLIM2-205ENST00000397761 IGKV3D-7A0A0C4DH55 119 aa11.18□□□□□ -0.62
PDLIM2-205ENST00000397761 BPY2O14599 106 aa11.18□□□□□ -0.62
PDLIM2-205ENST00000397761 LIMD2Q9BT23 127 aa11.18□□□□□ -0.62
PDLIM2-205ENST00000397761 HERC1Q15751 4861 aa11.17□□□□□ -0.62
PDLIM2-205ENST00000397761 TNXBP22105 4242 aa11.15□□□□□ -0.62
PDLIM2-205ENST00000397761 OXTP01178 125 aa11.14□□□□□ -0.63
PDLIM2-205ENST00000397761 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
PDLIM2-205ENST00000397761 IMUPQ9GZP8 106 aa11.14□□□□□ -0.63
PDLIM2-205ENST00000397761 J3KT08 172 aa11.13□□□□□ -0.63
PDLIM2-205ENST00000397761 DSCR10P59022 87 aa11.13□□□□□ -0.63
PDLIM2-205ENST00000397761 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
PDLIM2-205ENST00000397761 C1orf195Q5TG92 126 aa11.09□□□□□ -0.63
PDLIM2-205ENST00000397761 IGKV4-1P06312 121 aa11.07□□□□□ -0.64
PDLIM2-205ENST00000397761 A8MWP4 228 aa11.06□□□□□ -0.64
PDLIM2-205ENST00000397761 KRTAP29-1A8MX34 341 aaPredicted RBP11.06□□□□□ -0.64
PDLIM2-205ENST00000397761 Q8N9L7 120 aa11.05□□□□□ -0.64
PDLIM2-205ENST00000397761 K7EQZ3 153 aa11.04□□□□□ -0.64
PDLIM2-205ENST00000397761 HIST1H4AP62805 103 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms