RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZNF706Q9Y5V0 76 aaPredicted RBP16.54■□□□□ 0.24
CPNE1-203ENST00000397442 A0A1B0GV72 72 aa16.53■□□□□ 0.24
CPNE1-203ENST00000397442 LINC00483Q53H64 154 aa16.53■□□□□ 0.24
CPNE1-203ENST00000397442 KIAA1109Q2LD37 5005 aa16.49■□□□□ 0.23
CPNE1-203ENST00000397442 JMJD7-PLA2G4BH0Y9G9 81 aa16.49■□□□□ 0.23
CPNE1-203ENST00000397442 KRTAP17-1Q9BYP8 105 aa16.48■□□□□ 0.23
CPNE1-203ENST00000397442 ANAPC11Q9NYG5 84 aa16.47■□□□□ 0.23
CPNE1-203ENST00000397442 SPINK6Q6UWN8 80 aa16.46■□□□□ 0.23
CPNE1-203ENST00000397442 FAM229AH3BQW9 127 aa16.45■□□□□ 0.22
CPNE1-203ENST00000397442 C14orf132Q9NPU4 83 aa16.45■□□□□ 0.22
CPNE1-203ENST00000397442 RBM3P98179 157 aaKnown RBP16.44■□□□□ 0.22
CPNE1-203ENST00000397442 PLA2G1BP04054 148 aaKnown RBP16.43■□□□□ 0.22
CPNE1-203ENST00000397442 Q5VSD8 79 aa16.42■□□□□ 0.22
CPNE1-203ENST00000397442 KRTAP1-4P0C5Y4 121 aa16.4■□□□□ 0.22
CPNE1-203ENST00000397442 IGLV8-61A0A075B6I0 122 aa16.38■□□□□ 0.21
CPNE1-203ENST00000397442 TRBV7-4A0A0J9YYF1 115 aa16.38■□□□□ 0.21
CPNE1-203ENST00000397442 F8WEM9 126 aa16.37■□□□□ 0.21
CPNE1-203ENST00000397442 DSCR8Q96T75 97 aa16.36■□□□□ 0.21
CPNE1-203ENST00000397442 LOC110117498A0A087WWA1 95 aa16.35■□□□□ 0.21
CPNE1-203ENST00000397442 Q6ZQT0 140 aa16.34■□□□□ 0.21
CPNE1-203ENST00000397442 Q8N1X5 172 aa16.34■□□□□ 0.21
CPNE1-203ENST00000397442 IGLV9-49A0A0B4J1Y8 123 aa16.33■□□□□ 0.2
CPNE1-203ENST00000397442 A0A087X002 238 aa16.3■□□□□ 0.2
CPNE1-203ENST00000397442 FAM229BQ4G0N7 80 aa16.3■□□□□ 0.2
CPNE1-203ENST00000397442 A0A0G2JQZ4 141 aa16.29■□□□□ 0.2
CPNE1-203ENST00000397442 IGFL1Q6UW32 110 aa16.28■□□□□ 0.2
CPNE1-203ENST00000397442 PKHD1L1Q86WI1 4243 aa16.27■□□□□ 0.2
CPNE1-203ENST00000397442 PDE6GP18545 87 aa16.27■□□□□ 0.2
CPNE1-203ENST00000397442 CCKP06307 115 aa16.27■□□□□ 0.19
CPNE1-203ENST00000397442 C9orf153Q5TBE3 101 aa16.27■□□□□ 0.19
CPNE1-203ENST00000397442 MOBPQ13875 183 aa16.26■□□□□ 0.19
CPNE1-203ENST00000397442 KRTAP13-2Q52LG2 175 aa16.25■□□□□ 0.19
CPNE1-203ENST00000397442 Q6JHZ5 121 aa16.24■□□□□ 0.19
CPNE1-203ENST00000397442 Q8NBF4 154 aa16.23■□□□□ 0.19
CPNE1-203ENST00000397442 A0A1W2PNM2 257 aa16.22■□□□□ 0.19
CPNE1-203ENST00000397442 J3QR89 54 aa16.21■□□□□ 0.19
CPNE1-203ENST00000397442 CRYGAP11844 174 aa16.21■□□□□ 0.19
CPNE1-203ENST00000397442 BIRC6Q9NR09 4857 aa16.21■□□□□ 0.19
CPNE1-203ENST00000397442 K7ERU9 68 aa16.21■□□□□ 0.18
CPNE1-203ENST00000397442 VPS25Q9BRG1 176 aa16.18■□□□□ 0.18
CPNE1-203ENST00000397442 FAM240AA0A1B0GVK7 77 aa16.14■□□□□ 0.18
CPNE1-203ENST00000397442 SSBP3-AS1Q7Z2R9 100 aa16.14■□□□□ 0.18
CPNE1-203ENST00000397442 C21orf62-AS1Q17RA5 79 aa16.14■□□□□ 0.17
CPNE1-203ENST00000397442 PRR26Q8N8Z3 221 aa16.13■□□□□ 0.17
CPNE1-203ENST00000397442 Q6Q795 121 aa16.1■□□□□ 0.17
CPNE1-203ENST00000397442 ACYP1P07311 99 aa16.08■□□□□ 0.17
CPNE1-203ENST00000397442 KRTAP4-5Q9BYR2 181 aa16.08■□□□□ 0.16
CPNE1-203ENST00000397442 LINC00846Q9NV44 126 aa16.07■□□□□ 0.16
CPNE1-203ENST00000397442 TYMSOSQ8TAI1 123 aa16.06■□□□□ 0.16
CPNE1-203ENST00000397442 A0A1B0GW54 56 aa16.03■□□□□ 0.16
CPNE1-203ENST00000397442 HRCT1Q6UXD1 115 aa16.02■□□□□ 0.16
CPNE1-203ENST00000397442 TRBV7-7A0A0K0K1E9 115 aa16■□□□□ 0.15
CPNE1-203ENST00000397442 CDIP1Q9H305 208 aa16■□□□□ 0.15
CPNE1-203ENST00000397442 A0A087WSZ3 146 aa15.99■□□□□ 0.15
CPNE1-203ENST00000397442 LRP1Q07954 4544 aaKnown RBP15.98■□□□□ 0.15
CPNE1-203ENST00000397442 FLG2Q5D862 2391 aaPredicted RBP15.98■□□□□ 0.15
CPNE1-203ENST00000397442 CD164Q04900 197 aa15.98■□□□□ 0.15
CPNE1-203ENST00000397442 HERC2O95714 4834 aa15.97■□□□□ 0.15
CPNE1-203ENST00000397442 Q6ZVQ6 151 aa15.91■□□□□ 0.14
CPNE1-203ENST00000397442 FAT3Q8TDW7 4589 aa15.91■□□□□ 0.14
CPNE1-203ENST00000397442 KRTAP10-8P60410 259 aa15.9■□□□□ 0.14
CPNE1-203ENST00000397442 UBL5Q9BZL1 73 aa15.89■□□□□ 0.13
CPNE1-203ENST00000397442 LINC00304Q8N9R0 145 aa15.88■□□□□ 0.13
CPNE1-203ENST00000397442 MYCBP2O75592 4640 aa15.86■□□□□ 0.13
CPNE1-203ENST00000397442 NREPQ16612 68 aa15.86■□□□□ 0.13
CPNE1-203ENST00000397442 TNXBP22105 4242 aa15.83■□□□□ 0.13
CPNE1-203ENST00000397442 C4orf48Q5BLP8 95 aa15.83■□□□□ 0.12
CPNE1-203ENST00000397442 SPINK1P00995 79 aa15.81■□□□□ 0.12
CPNE1-203ENST00000397442 SPAG11AQ6PDA7 123 aa15.8■□□□□ 0.12
CPNE1-203ENST00000397442 LINC00643Q86TS7 51 aa15.8■□□□□ 0.12
CPNE1-203ENST00000397442 SS18L2Q9UHA2 77 aa15.8■□□□□ 0.12
CPNE1-203ENST00000397442 MT1HL1P0DM35 61 aa15.79■□□□□ 0.12
CPNE1-203ENST00000397442 Q5XG85 94 aa15.79■□□□□ 0.12
CPNE1-203ENST00000397442 LINC00472Q9H8W2 130 aa15.77■□□□□ 0.12
CPNE1-203ENST00000397442 Q96NJ1 140 aa15.76■□□□□ 0.11
CPNE1-203ENST00000397442 ABCA13Q86UQ4 5058 aa15.76■□□□□ 0.11
CPNE1-203ENST00000397442 OXTP01178 125 aa15.75■□□□□ 0.11
CPNE1-203ENST00000397442 RPS29P62273 56 aaKnown RBP15.75■□□□□ 0.11
CPNE1-203ENST00000397442 ASB16-AS1Q495Z4 193 aa15.73■□□□□ 0.11
CPNE1-203ENST00000397442 DEFB116Q30KQ4 102 aa15.72■□□□□ 0.11
CPNE1-203ENST00000397442 LIMD2Q9BT23 127 aa15.72■□□□□ 0.11
CPNE1-203ENST00000397442 MT-ATP8P03928 68 aa15.7■□□□□ 0.1
CPNE1-203ENST00000397442 IGKV3D-7A0A0C4DH55 119 aa15.7■□□□□ 0.1
CPNE1-203ENST00000397442 BPY2O14599 106 aa15.68■□□□□ 0.1
CPNE1-203ENST00000397442 ATP5EP2Q5VTU8 51 aa15.67■□□□□ 0.1
CPNE1-203ENST00000397442 KRTAP29-1A8MX34 341 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-203ENST00000397442 CXCL6P80162 114 aa15.66■□□□□ 0.1
CPNE1-203ENST00000397442 SIGMAR1Q99720 223 aa15.66■□□□□ 0.1
CPNE1-203ENST00000397442 DSCR10P59022 87 aa15.63■□□□□ 0.09
CPNE1-203ENST00000397442 C1orf195Q5TG92 126 aa15.63■□□□□ 0.09
CPNE1-203ENST00000397442 IGKV4-1P06312 121 aa15.59■□□□□ 0.09
CPNE1-203ENST00000397442 DMBT1Q9UGM3 2413 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-203ENST00000397442 J3KT08 172 aa15.58■□□□□ 0.08
CPNE1-203ENST00000397442 Q8N9L7 120 aa15.57■□□□□ 0.08
CPNE1-203ENST00000397442 K7EQZ3 153 aa15.52■□□□□ 0.08
CPNE1-203ENST00000397442 A8MWP4 228 aa15.51■□□□□ 0.07
CPNE1-203ENST00000397442 IMUPQ9GZP8 106 aa15.49■□□□□ 0.07
CPNE1-203ENST00000397442 HIST1H4AP62805 103 aaKnown RBP15.48■□□□□ 0.07
CPNE1-203ENST00000397442 RETNLBQ9BQ08 111 aa15.47■□□□□ 0.07
CPNE1-203ENST00000397442 PRR15Q8IV56 129 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms