RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PLAC8Q9NZF1 115 aa9.99□□□□□ -0.81
SNX6-202ENST00000396526 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
SNX6-202ENST00000396526 TRAV7A0A075B6U4 112 aa9.98□□□□□ -0.81
SNX6-202ENST00000396526 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
SNX6-202ENST00000396526 CSMD3Q7Z407 3707 aa9.95□□□□□ -0.82
SNX6-202ENST00000396526 KRTAP13-1Q8IUC0 172 aa9.95□□□□□ -0.82
SNX6-202ENST00000396526 VPS13DQ5THJ4 4388 aa9.95□□□□□ -0.82
SNX6-202ENST00000396526 SS18L2Q9UHA2 77 aa9.95□□□□□ -0.82
SNX6-202ENST00000396526 A0A087WSZ3 146 aa9.94□□□□□ -0.82
SNX6-202ENST00000396526 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
SNX6-202ENST00000396526 Q8N9L7 120 aa9.94□□□□□ -0.82
SNX6-202ENST00000396526 PSORS1C2Q9UIG4 136 aa9.93□□□□□ -0.82
SNX6-202ENST00000396526 LYSTQ99698 3801 aa9.92□□□□□ -0.82
SNX6-202ENST00000396526 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
SNX6-202ENST00000396526 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
SNX6-202ENST00000396526 ZNF861PO60384 105 aa9.9□□□□□ -0.82
SNX6-202ENST00000396526 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
SNX6-202ENST00000396526 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
SNX6-202ENST00000396526 C20orf197Q8N268 126 aa9.89□□□□□ -0.83
SNX6-202ENST00000396526 FBN3Q75N90 2809 aa9.87□□□□□ -0.83
SNX6-202ENST00000396526 DNAH7Q8WXX0 4024 aa9.87□□□□□ -0.83
SNX6-202ENST00000396526 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
SNX6-202ENST00000396526 DSCR10P59022 87 aa9.84□□□□□ -0.83
SNX6-202ENST00000396526 LINC00483Q53H64 154 aa9.84□□□□□ -0.83
SNX6-202ENST00000396526 TMEM258P61165 79 aa9.83□□□□□ -0.84
SNX6-202ENST00000396526 TGP01266 2768 aa9.83□□□□□ -0.84
SNX6-202ENST00000396526 K7EQZ3 153 aa9.81□□□□□ -0.84
SNX6-202ENST00000396526 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
SNX6-202ENST00000396526 J3KT08 172 aa9.81□□□□□ -0.84
SNX6-202ENST00000396526 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
SNX6-202ENST00000396526 DEFB116Q30KQ4 102 aa9.8□□□□□ -0.84
SNX6-202ENST00000396526 HCG22E2RYF7 251 aa9.79□□□□□ -0.84
SNX6-202ENST00000396526 NDUFB1O75438 58 aa9.78□□□□□ -0.84
SNX6-202ENST00000396526 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
SNX6-202ENST00000396526 NDUFC1O43677 76 aa9.77□□□□□ -0.84
SNX6-202ENST00000396526 KLKP1Q107X0 134 aa9.77□□□□□ -0.84
SNX6-202ENST00000396526 MOBPQ13875 183 aa9.77□□□□□ -0.85
SNX6-202ENST00000396526 OCR1Q9BZK8 76 aa9.77□□□□□ -0.85
SNX6-202ENST00000396526 TMEM254Q8TBM7 123 aa9.75□□□□□ -0.85
SNX6-202ENST00000396526 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
SNX6-202ENST00000396526 A8MWP4 228 aa9.74□□□□□ -0.85
SNX6-202ENST00000396526 FAM30AQ9NZY2 134 aa9.74□□□□□ -0.85
SNX6-202ENST00000396526 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
SNX6-202ENST00000396526 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
SNX6-202ENST00000396526 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
SNX6-202ENST00000396526 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
SNX6-202ENST00000396526 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
SNX6-202ENST00000396526 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.85
SNX6-202ENST00000396526 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
SNX6-202ENST00000396526 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
SNX6-202ENST00000396526 Q6ZSA8 131 aa9.7□□□□□ -0.86
SNX6-202ENST00000396526 ANAPC11Q9NYG5 84 aa9.7□□□□□ -0.86
SNX6-202ENST00000396526 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
SNX6-202ENST00000396526 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
SNX6-202ENST00000396526 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
SNX6-202ENST00000396526 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
SNX6-202ENST00000396526 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SNX6-202ENST00000396526 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
SNX6-202ENST00000396526 H7BZZ5 65 aa9.67□□□□□ -0.86
SNX6-202ENST00000396526 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
SNX6-202ENST00000396526 LINC00336Q6ZUF6 198 aa9.65□□□□□ -0.86
SNX6-202ENST00000396526 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
SNX6-202ENST00000396526 MP68P56378 58 aa9.64□□□□□ -0.87
SNX6-202ENST00000396526 DNAH2Q9P225 4427 aa9.64□□□□□ -0.87
SNX6-202ENST00000396526 CD164Q04900 197 aa9.63□□□□□ -0.87
SNX6-202ENST00000396526 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
SNX6-202ENST00000396526 ATP5EP56381 51 aaPredicted RBP9.63□□□□□ -0.87
SNX6-202ENST00000396526 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
SNX6-202ENST00000396526 ALMS1Q8TCU4 4167 aa9.6□□□□□ -0.87
SNX6-202ENST00000396526 LCE6AA0A183 80 aa9.6□□□□□ -0.87
SNX6-202ENST00000396526 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
SNX6-202ENST00000396526 FAM229BQ4G0N7 80 aa9.59□□□□□ -0.87
SNX6-202ENST00000396526 HECTD4Q9Y4D8 3996 aa9.58□□□□□ -0.88
SNX6-202ENST00000396526 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
SNX6-202ENST00000396526 Q96NJ1 140 aa9.57□□□□□ -0.88
SNX6-202ENST00000396526 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
SNX6-202ENST00000396526 IGHV6-1A0A0B4J1U7 121 aa9.55□□□□□ -0.88
SNX6-202ENST00000396526 MMP24-AS1A0A0U1RRL7 71 aa9.54□□□□□ -0.88
SNX6-202ENST00000396526 H3BPC8 53 aa9.54□□□□□ -0.88
SNX6-202ENST00000396526 C8orf17Q9NRJ1 99 aa9.54□□□□□ -0.88
SNX6-202ENST00000396526 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
SNX6-202ENST00000396526 SERP1Q9Y6X1 66 aa9.53□□□□□ -0.88
SNX6-202ENST00000396526 TP53AIP1Q9HCN2 124 aa9.52□□□□□ -0.88
SNX6-202ENST00000396526 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
SNX6-202ENST00000396526 H0Y9P7 68 aa9.5□□□□□ -0.89
SNX6-202ENST00000396526 LINC00208Q96KT6 92 aa9.5□□□□□ -0.89
SNX6-202ENST00000396526 NDUFS5O43920 106 aa9.48□□□□□ -0.89
SNX6-202ENST00000396526 ASB16-AS1Q495Z4 193 aa9.48□□□□□ -0.89
SNX6-202ENST00000396526 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
SNX6-202ENST00000396526 DNAH8Q96JB1 4490 aa9.47□□□□□ -0.89
SNX6-202ENST00000396526 A0A087X002 238 aa9.47□□□□□ -0.89
SNX6-202ENST00000396526 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
SNX6-202ENST00000396526 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.89
SNX6-202ENST00000396526 TRAV22A0A0B4J277 110 aa9.46□□□□□ -0.9
SNX6-202ENST00000396526 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
SNX6-202ENST00000396526 C8orf87E5RJ46 101 aa9.44□□□□□ -0.9
SNX6-202ENST00000396526 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
SNX6-202ENST00000396526 KRTAP13-2Q52LG2 175 aa9.43□□□□□ -0.9
SNX6-202ENST00000396526 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
SNX6-202ENST00000396526 Q5XG85 94 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms