RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
GTF2A2-202ENST00000396060 LRP1BQ9NZR2 4599 aa7.28□□□□□ -1.24
GTF2A2-202ENST00000396060 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
GTF2A2-202ENST00000396060 ZNF861PO60384 105 aa7.27□□□□□ -1.25
GTF2A2-202ENST00000396060 C1orf137Q5JT78 98 aa7.26□□□□□ -1.25
GTF2A2-202ENST00000396060 A0A1B0GW54 56 aa7.25□□□□□ -1.25
GTF2A2-202ENST00000396060 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
GTF2A2-202ENST00000396060 SIGMAR1Q99720 223 aa7.25□□□□□ -1.25
GTF2A2-202ENST00000396060 A0A1B0GV72 72 aa7.24□□□□□ -1.25
GTF2A2-202ENST00000396060 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
GTF2A2-202ENST00000396060 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
GTF2A2-202ENST00000396060 C3orf22Q8N5N4 141 aa7.23□□□□□ -1.25
GTF2A2-202ENST00000396060 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
GTF2A2-202ENST00000396060 ZNF706Q9Y5V0 76 aaPredicted RBP7.23□□□□□ -1.25
GTF2A2-202ENST00000396060 XGP55808 180 aa7.22□□□□□ -1.25
GTF2A2-202ENST00000396060 LINC00643Q86TS7 51 aa7.22□□□□□ -1.25
GTF2A2-202ENST00000396060 LINC00846Q9NV44 126 aa7.22□□□□□ -1.25
GTF2A2-202ENST00000396060 PKHD1P08F94 4074 aa7.22□□□□□ -1.25
GTF2A2-202ENST00000396060 F8WEM9 126 aa7.21□□□□□ -1.25
GTF2A2-202ENST00000396060 Q6JHZ5 121 aa7.2□□□□□ -1.26
GTF2A2-202ENST00000396060 MT-ATP8P03928 68 aa7.18□□□□□ -1.26
GTF2A2-202ENST00000396060 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
GTF2A2-202ENST00000396060 Q8NBF4 154 aa7.18□□□□□ -1.26
GTF2A2-202ENST00000396060 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
GTF2A2-202ENST00000396060 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 TRBV7-7A0A0K0K1E9 115 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 CRYGAP11844 174 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 Q6Q795 121 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
GTF2A2-202ENST00000396060 VPS13BQ7Z7G8 4022 aa7.14□□□□□ -1.27
GTF2A2-202ENST00000396060 HAMPP81172 84 aa7.14□□□□□ -1.27
GTF2A2-202ENST00000396060 ATP5EP2Q5VTU8 51 aa7.14□□□□□ -1.27
GTF2A2-202ENST00000396060 RYR3Q15413 4870 aa7.13□□□□□ -1.27
GTF2A2-202ENST00000396060 SCGB1A1P11684 91 aa7.13□□□□□ -1.27
GTF2A2-202ENST00000396060 Q6ZVQ6 151 aa7.12□□□□□ -1.27
GTF2A2-202ENST00000396060 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
GTF2A2-202ENST00000396060 CXCL6P80162 114 aa7.09□□□□□ -1.27
GTF2A2-202ENST00000396060 NREPQ16612 68 aa7.08□□□□□ -1.28
GTF2A2-202ENST00000396060 SPINK6Q6UWN8 80 aa7.08□□□□□ -1.28
GTF2A2-202ENST00000396060 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
GTF2A2-202ENST00000396060 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
GTF2A2-202ENST00000396060 IGLV9-49A0A0B4J1Y8 123 aa7.06□□□□□ -1.28
GTF2A2-202ENST00000396060 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
GTF2A2-202ENST00000396060 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
GTF2A2-202ENST00000396060 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
GTF2A2-202ENST00000396060 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
GTF2A2-202ENST00000396060 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
GTF2A2-202ENST00000396060 FAT1Q14517 4588 aa7.05□□□□□ -1.28
GTF2A2-202ENST00000396060 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
GTF2A2-202ENST00000396060 CD164Q04900 197 aa7.03□□□□□ -1.28
GTF2A2-202ENST00000396060 MOBPQ13875 183 aa7.03□□□□□ -1.28
GTF2A2-202ENST00000396060 A0A087WSZ3 146 aa7.03□□□□□ -1.28
GTF2A2-202ENST00000396060 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
GTF2A2-202ENST00000396060 BPY2O14599 106 aa7.01□□□□□ -1.29
GTF2A2-202ENST00000396060 A0A087X002 238 aa6.99□□□□□ -1.29
GTF2A2-202ENST00000396060 HIST1H4AP62805 103 aaKnown RBP6.99□□□□□ -1.29
GTF2A2-202ENST00000396060 KRTAP13-2Q52LG2 175 aa6.99□□□□□ -1.29
GTF2A2-202ENST00000396060 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
GTF2A2-202ENST00000396060 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
GTF2A2-202ENST00000396060 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
GTF2A2-202ENST00000396060 RYR1P21817 5038 aa6.98□□□□□ -1.29
GTF2A2-202ENST00000396060 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
GTF2A2-202ENST00000396060 HSPG2P98160 4391 aa6.96□□□□□ -1.29
GTF2A2-202ENST00000396060 DSCR10P59022 87 aa6.96□□□□□ -1.29
GTF2A2-202ENST00000396060 Q5XG85 94 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 J3KT08 172 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 PCP4P48539 62 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
GTF2A2-202ENST00000396060 A0A087WVE0 104 aa6.94□□□□□ -1.3
GTF2A2-202ENST00000396060 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
GTF2A2-202ENST00000396060 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
GTF2A2-202ENST00000396060 Q96NJ1 140 aa6.93□□□□□ -1.3
GTF2A2-202ENST00000396060 HRCT1Q6UXD1 115 aa6.91□□□□□ -1.3
GTF2A2-202ENST00000396060 A8MWP4 228 aa6.9□□□□□ -1.31
GTF2A2-202ENST00000396060 ATOX1O00244 68 aa6.9□□□□□ -1.31
GTF2A2-202ENST00000396060 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.31
GTF2A2-202ENST00000396060 Q8N9L7 120 aa6.89□□□□□ -1.31
GTF2A2-202ENST00000396060 K7EQZ3 153 aa6.88□□□□□ -1.31
GTF2A2-202ENST00000396060 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
GTF2A2-202ENST00000396060 PRR15Q8IV56 129 aa6.88□□□□□ -1.31
GTF2A2-202ENST00000396060 SPINK1P00995 79 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 Q5VSD8 79 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 SPAG11AQ6PDA7 123 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
GTF2A2-202ENST00000396060 J3QL48 77 aa6.86□□□□□ -1.31
GTF2A2-202ENST00000396060 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
GTF2A2-202ENST00000396060 KIAA1109Q2LD37 5005 aa6.86□□□□□ -1.31
GTF2A2-202ENST00000396060 NDUFB1O75438 58 aa6.85□□□□□ -1.31
GTF2A2-202ENST00000396060 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
GTF2A2-202ENST00000396060 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
GTF2A2-202ENST00000396060 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
GTF2A2-202ENST00000396060 Q8N1X5 172 aa6.84□□□□□ -1.31
GTF2A2-202ENST00000396060 LINC00304Q8N9R0 145 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms