RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 CENPEQ02224 2701 aa10.55□□□□□ -0.72
UBFD1-201ENST00000395878 OXTP01178 125 aa10.55□□□□□ -0.72
UBFD1-201ENST00000395878 LUZP6Q538Z0 58 aa10.52□□□□□ -0.72
UBFD1-201ENST00000395878 CAMK2N1Q7Z7J9 78 aa10.52□□□□□ -0.72
UBFD1-201ENST00000395878 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
UBFD1-201ENST00000395878 STAB1Q9NY15 2570 aa10.5□□□□□ -0.73
UBFD1-201ENST00000395878 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
UBFD1-201ENST00000395878 CSAG1Q6PB30 78 aa10.5□□□□□ -0.73
UBFD1-201ENST00000395878 LAMA2P24043 3122 aaKnown RBP10.47□□□□□ -0.73
UBFD1-201ENST00000395878 S4R3F8 94 aa10.47□□□□□ -0.73
UBFD1-201ENST00000395878 AKAP13Q12802 2813 aa10.46□□□□□ -0.73
UBFD1-201ENST00000395878 Q5VV11 94 aa10.45□□□□□ -0.74
UBFD1-201ENST00000395878 SPINK7P58062 85 aa10.43□□□□□ -0.74
UBFD1-201ENST00000395878 CHD6Q8TD26 2715 aa10.42□□□□□ -0.74
UBFD1-201ENST00000395878 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
UBFD1-201ENST00000395878 PRAC1Q96KF2 57 aa10.4□□□□□ -0.74
UBFD1-201ENST00000395878 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
UBFD1-201ENST00000395878 LINC00483Q53H64 154 aa10.39□□□□□ -0.75
UBFD1-201ENST00000395878 H3BS24 57 aa10.36□□□□□ -0.75
UBFD1-201ENST00000395878 M0R2T5 61 aa10.36□□□□□ -0.75
UBFD1-201ENST00000395878 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
UBFD1-201ENST00000395878 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
UBFD1-201ENST00000395878 TEX15Q9BXT5 2789 aa10.33□□□□□ -0.76
UBFD1-201ENST00000395878 KRTAP10-1P60331 282 aa10.32□□□□□ -0.76
UBFD1-201ENST00000395878 FREM2Q5SZK8 3169 aa10.31□□□□□ -0.76
UBFD1-201ENST00000395878 TEP1Q99973 2627 aaKnown RBP10.31□□□□□ -0.76
UBFD1-201ENST00000395878 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
UBFD1-201ENST00000395878 Q6ZR54 194 aa10.28□□□□□ -0.76
UBFD1-201ENST00000395878 HTTP42858 3142 aa10.28□□□□□ -0.76
UBFD1-201ENST00000395878 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
UBFD1-201ENST00000395878 ZNF292O60281 2723 aa10.27□□□□□ -0.76
UBFD1-201ENST00000395878 R4GN34 69 aa10.27□□□□□ -0.76
UBFD1-201ENST00000395878 GCN1Q92616 2671 aaKnown RBP10.27□□□□□ -0.77
UBFD1-201ENST00000395878 Q5VSD8 79 aa10.26□□□□□ -0.77
UBFD1-201ENST00000395878 UNC79Q9P2D8 2635 aa10.25□□□□□ -0.77
UBFD1-201ENST00000395878 LCE6AA0A183 80 aa10.24□□□□□ -0.77
UBFD1-201ENST00000395878 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
UBFD1-201ENST00000395878 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
UBFD1-201ENST00000395878 MGAQ8IWI9 3026 aa10.22□□□□□ -0.77
UBFD1-201ENST00000395878 COL6A5A8TX70 2615 aa10.22□□□□□ -0.77
UBFD1-201ENST00000395878 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
UBFD1-201ENST00000395878 PANO1I0J062 215 aa10.21□□□□□ -0.77
UBFD1-201ENST00000395878 FLG2Q5D862 2391 aaPredicted RBP10.19□□□□□ -0.78
UBFD1-201ENST00000395878 LAMA3Q16787 3333 aa10.18□□□□□ -0.78
UBFD1-201ENST00000395878 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
UBFD1-201ENST00000395878 NOTCH1P46531 2555 aa10.17□□□□□ -0.78
UBFD1-201ENST00000395878 TRANK1O15050 2925 aa10.17□□□□□ -0.78
UBFD1-201ENST00000395878 BRCA2P51587 3418 aa10.15□□□□□ -0.79
UBFD1-201ENST00000395878 ROMO1P60602 79 aa10.15□□□□□ -0.79
UBFD1-201ENST00000395878 TRIOO75962 3097 aa10.13□□□□□ -0.79
UBFD1-201ENST00000395878 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
UBFD1-201ENST00000395878 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-201ENST00000395878 A0A087X002 238 aa10.09□□□□□ -0.79
UBFD1-201ENST00000395878 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
UBFD1-201ENST00000395878 UNC80Q8N2C7 3258 aa10.08□□□□□ -0.8
UBFD1-201ENST00000395878 M0QZ58 72 aa10.08□□□□□ -0.8
UBFD1-201ENST00000395878 ASB16-AS1Q495Z4 193 aa10.05□□□□□ -0.8
UBFD1-201ENST00000395878 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
UBFD1-201ENST00000395878 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
UBFD1-201ENST00000395878 VPS13AQ96RL7 3174 aa10.03□□□□□ -0.8
UBFD1-201ENST00000395878 FRYQ5TBA9 3013 aa10.03□□□□□ -0.8
UBFD1-201ENST00000395878 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
UBFD1-201ENST00000395878 A0A0A0MQY5 61 aa10.02□□□□□ -0.8
UBFD1-201ENST00000395878 NOTCH2NLQ7Z3S9 236 aa10.01□□□□□ -0.81
UBFD1-201ENST00000395878 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
UBFD1-201ENST00000395878 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
UBFD1-201ENST00000395878 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
UBFD1-201ENST00000395878 KRTAP11-1Q8IUC1 163 aa9.98□□□□□ -0.81
UBFD1-201ENST00000395878 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
UBFD1-201ENST00000395878 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
UBFD1-201ENST00000395878 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-201ENST00000395878 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-201ENST00000395878 PRUNE2Q8WUY3 3088 aa9.96□□□□□ -0.81
UBFD1-201ENST00000395878 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
UBFD1-201ENST00000395878 CELSR3Q9NYQ7 3312 aa9.94□□□□□ -0.82
UBFD1-201ENST00000395878 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
UBFD1-201ENST00000395878 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
UBFD1-201ENST00000395878 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-201ENST00000395878 KRTAP13-1Q8IUC0 172 aa9.86□□□□□ -0.83
UBFD1-201ENST00000395878 PLAC4Q8WY50 150 aa9.85□□□□□ -0.83
UBFD1-201ENST00000395878 KALRNO60229 2985 aa9.85□□□□□ -0.83
UBFD1-201ENST00000395878 A8MU10 97 aa9.83□□□□□ -0.84
UBFD1-201ENST00000395878 KRTAP13-2Q52LG2 175 aa9.81□□□□□ -0.84
UBFD1-201ENST00000395878 BAHCC1Q9P281 2608 aa9.8□□□□□ -0.84
UBFD1-201ENST00000395878 ITPR2Q14571 2701 aa9.8□□□□□ -0.84
UBFD1-201ENST00000395878 A6NN06 94 aa9.79□□□□□ -0.84
UBFD1-201ENST00000395878 DNAH14Q0VDD8 3507 aa9.75□□□□□ -0.85
UBFD1-201ENST00000395878 ITPR1Q14643 2758 aa9.74□□□□□ -0.85
UBFD1-201ENST00000395878 VCANP13611 3396 aa9.72□□□□□ -0.85
UBFD1-201ENST00000395878 CDH23Q9H251 3354 aa9.7□□□□□ -0.86
UBFD1-201ENST00000395878 A8MUU9 505 aa9.69□□□□□ -0.86
UBFD1-201ENST00000395878 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
UBFD1-201ENST00000395878 ASH1LQ9NR48 2969 aaKnown RBP9.69□□□□□ -0.86
UBFD1-201ENST00000395878 DMXL2Q8TDJ6 3036 aa9.66□□□□□ -0.86
UBFD1-201ENST00000395878 LAMA1P25391 3075 aa9.63□□□□□ -0.87
UBFD1-201ENST00000395878 KMT2BQ9UMN6 2715 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-201ENST00000395878 FLNCQ14315 2725 aa9.58□□□□□ -0.88
UBFD1-201ENST00000395878 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
UBFD1-201ENST00000395878 UTP20O75691 2785 aaKnown RBP9.53□□□□□ -0.88
UBFD1-201ENST00000395878 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms