RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 CCKP06307 115 aa15.02□□□□□ -0.01
CTF1-202ENST00000395019 CDIP1Q9H305 208 aa15.02□□□□□ -0.01
CTF1-202ENST00000395019 TRBV7-4A0A0J9YYF1 115 aa15□□□□□ -0.01
CTF1-202ENST00000395019 PDE6GP18545 87 aa15□□□□□ -0.01
CTF1-202ENST00000395019 Q6ZQT0 140 aa14.99□□□□□ -0.01
CTF1-202ENST00000395019 FAT1Q14517 4588 aa14.99□□□□□ -0.01
CTF1-202ENST00000395019 SPRR1BP22528 89 aa14.99□□□□□ -0.01
CTF1-202ENST00000395019 SMIM29Q86T20 159 aa14.99□□□□□ -0.01
CTF1-202ENST00000395019 C3orf22Q8N5N4 141 aa14.99□□□□□ -0.01
CTF1-202ENST00000395019 CDK2AP2O75956 126 aa14.98□□□□□ -0.01
CTF1-202ENST00000395019 ZNF861PO60384 105 aa14.97□□□□□ -0.01
CTF1-202ENST00000395019 SMR3BP02814 79 aaPredicted RBP14.95□□□□□ -0.02
CTF1-202ENST00000395019 KRTAP17-1Q9BYP8 105 aa14.95□□□□□ -0.02
CTF1-202ENST00000395019 IGLV7-43P04211 117 aa14.94□□□□□ -0.02
CTF1-202ENST00000395019 VPS13BQ7Z7G8 4022 aa14.93□□□□□ -0.02
CTF1-202ENST00000395019 C21orf62-AS1Q17RA5 79 aa14.92□□□□□ -0.02
CTF1-202ENST00000395019 F8WEM9 126 aa14.88□□□□□ -0.03
CTF1-202ENST00000395019 SPRR4Q96PI1 79 aa14.88□□□□□ -0.03
CTF1-202ENST00000395019 ZNF706Q9Y5V0 76 aaPredicted RBP14.88□□□□□ -0.03
CTF1-202ENST00000395019 IGLV8-61A0A075B6I0 122 aa14.85□□□□□ -0.03
CTF1-202ENST00000395019 LINC00846Q9NV44 126 aa14.85□□□□□ -0.03
CTF1-202ENST00000395019 LINC00483Q53H64 154 aa14.84□□□□□ -0.03
CTF1-202ENST00000395019 SIGMAR1Q99720 223 aa14.83□□□□□ -0.04
CTF1-202ENST00000395019 HERC2O95714 4834 aa14.79□□□□□ -0.04
CTF1-202ENST00000395019 LINC00643Q86TS7 51 aa14.78□□□□□ -0.04
CTF1-202ENST00000395019 MT-ATP8P03928 68 aa14.77□□□□□ -0.04
CTF1-202ENST00000395019 A0A1W2PNM2 257 aa14.76□□□□□ -0.05
CTF1-202ENST00000395019 IGFL1Q6UW32 110 aa14.76□□□□□ -0.05
CTF1-202ENST00000395019 Q8NBF4 154 aa14.75□□□□□ -0.05
CTF1-202ENST00000395019 Q6JHZ5 121 aa14.74□□□□□ -0.05
CTF1-202ENST00000395019 A0A1B0GW54 56 aa14.74□□□□□ -0.05
CTF1-202ENST00000395019 KRTAP10-4P60372 401 aaPredicted RBP14.74□□□□□ -0.05
CTF1-202ENST00000395019 SRRM2Q9UQ35 2752 aaKnown RBP14.73□□□□□ -0.05
CTF1-202ENST00000395019 UBL5Q9BZL1 73 aa14.73□□□□□ -0.05
CTF1-202ENST00000395019 RPL37AP61513 92 aaKnown RBP14.72□□□□□ -0.05
CTF1-202ENST00000395019 Q5VSD8 79 aa14.72□□□□□ -0.05
CTF1-202ENST00000395019 Q8N1X5 172 aa14.71□□□□□ -0.05
CTF1-202ENST00000395019 A0A0G2JQZ4 141 aa14.68□□□□□ -0.06
CTF1-202ENST00000395019 KRTAP4-5Q9BYR2 181 aa14.67□□□□□ -0.06
CTF1-202ENST00000395019 ANAPC11Q9NYG5 84 aa14.67□□□□□ -0.06
CTF1-202ENST00000395019 PKHD1L1Q86WI1 4243 aa14.67□□□□□ -0.06
CTF1-202ENST00000395019 IGLV9-49A0A0B4J1Y8 123 aa14.66□□□□□ -0.06
CTF1-202ENST00000395019 FAM229AH3BQW9 127 aa14.66□□□□□ -0.06
CTF1-202ENST00000395019 CRYGAP11844 174 aa14.66□□□□□ -0.06
CTF1-202ENST00000395019 Q6ZVQ6 151 aa14.66□□□□□ -0.06
CTF1-202ENST00000395019 C9orf153Q5TBE3 101 aa14.64□□□□□ -0.07
CTF1-202ENST00000395019 Q6Q795 121 aa14.62□□□□□ -0.07
CTF1-202ENST00000395019 TRBV7-7A0A0K0K1E9 115 aa14.61□□□□□ -0.07
CTF1-202ENST00000395019 PLA2G1BP04054 148 aaKnown RBP14.6□□□□□ -0.07
CTF1-202ENST00000395019 ATP5EP2Q5VTU8 51 aa14.59□□□□□ -0.07
CTF1-202ENST00000395019 MOBPQ13875 183 aa14.59□□□□□ -0.07
CTF1-202ENST00000395019 IGKV3D-7A0A0C4DH55 119 aa14.58□□□□□ -0.08
CTF1-202ENST00000395019 NREPQ16612 68 aa14.58□□□□□ -0.08
CTF1-202ENST00000395019 IMUPQ9GZP8 106 aa14.57□□□□□ -0.08
CTF1-202ENST00000395019 SPINK6Q6UWN8 80 aa14.56□□□□□ -0.08
CTF1-202ENST00000395019 FAM229BQ4G0N7 80 aa14.55□□□□□ -0.08
CTF1-202ENST00000395019 ABCA13Q86UQ4 5058 aa14.54□□□□□ -0.08
CTF1-202ENST00000395019 KRTAP1-4P0C5Y4 121 aa14.52□□□□□ -0.08
CTF1-202ENST00000395019 A0A087WSZ3 146 aa14.52□□□□□ -0.09
CTF1-202ENST00000395019 SCGB1A1P11684 91 aa14.52□□□□□ -0.09
CTF1-202ENST00000395019 CXCL6P80162 114 aa14.5□□□□□ -0.09
CTF1-202ENST00000395019 SSBP3-AS1Q7Z2R9 100 aa14.49□□□□□ -0.09
CTF1-202ENST00000395019 A0A087X002 238 aa14.48□□□□□ -0.09
CTF1-202ENST00000395019 KRTAP13-2Q52LG2 175 aa14.44□□□□□ -0.1
CTF1-202ENST00000395019 BPY2O14599 106 aa14.43□□□□□ -0.1
CTF1-202ENST00000395019 LRP1Q07954 4544 aaKnown RBP14.42□□□□□ -0.1
CTF1-202ENST00000395019 MYCBP2O75592 4640 aa14.42□□□□□ -0.1
CTF1-202ENST00000395019 FLG2Q5D862 2391 aaPredicted RBP14.41□□□□□ -0.1
CTF1-202ENST00000395019 HRCT1Q6UXD1 115 aa14.41□□□□□ -0.1
CTF1-202ENST00000395019 FAT3Q8TDW7 4589 aa14.39□□□□□ -0.11
CTF1-202ENST00000395019 CD164Q04900 197 aa14.39□□□□□ -0.11
CTF1-202ENST00000395019 HIST1H4AP62805 103 aaKnown RBP14.38□□□□□ -0.11
CTF1-202ENST00000395019 A0A087WVE0 104 aa14.34□□□□□ -0.11
CTF1-202ENST00000395019 SS18L2Q9UHA2 77 aa14.34□□□□□ -0.11
CTF1-202ENST00000395019 LINC00472Q9H8W2 130 aa14.33□□□□□ -0.11
CTF1-202ENST00000395019 PCLOQ9Y6V0 5065 aa14.33□□□□□ -0.12
CTF1-202ENST00000395019 FAM236AA0A1B0GUQ0 79 aa14.3□□□□□ -0.12
CTF1-202ENST00000395019 FAM236BA0A1B0GV22 79 aa14.3□□□□□ -0.12
CTF1-202ENST00000395019 DSCR10P59022 87 aa14.3□□□□□ -0.12
CTF1-202ENST00000395019 TYMSOSQ8TAI1 123 aa14.29□□□□□ -0.12
CTF1-202ENST00000395019 IGKV4-1P06312 121 aa14.28□□□□□ -0.12
CTF1-202ENST00000395019 DEFB116Q30KQ4 102 aa14.28□□□□□ -0.12
CTF1-202ENST00000395019 Q8N9L7 120 aa14.27□□□□□ -0.12
CTF1-202ENST00000395019 PRR26Q8N8Z3 221 aa14.25□□□□□ -0.13
CTF1-202ENST00000395019 Q96NJ1 140 aa14.25□□□□□ -0.13
CTF1-202ENST00000395019 TNXBP22105 4242 aa14.23□□□□□ -0.13
CTF1-202ENST00000395019 J3KT08 172 aa14.23□□□□□ -0.13
CTF1-202ENST00000395019 PCP4P48539 62 aa14.23□□□□□ -0.13
CTF1-202ENST00000395019 K7EQZ3 153 aa14.2□□□□□ -0.14
CTF1-202ENST00000395019 Q5XG85 94 aa14.19□□□□□ -0.14
CTF1-202ENST00000395019 ASB16-AS1Q495Z4 193 aa14.19□□□□□ -0.14
CTF1-202ENST00000395019 C4orf48Q5BLP8 95 aa14.17□□□□□ -0.14
CTF1-202ENST00000395019 A8MWP4 228 aa14.16□□□□□ -0.14
CTF1-202ENST00000395019 ATOX1O00244 68 aa14.13□□□□□ -0.15
CTF1-202ENST00000395019 SPINK1P00995 79 aa14.13□□□□□ -0.15
CTF1-202ENST00000395019 ANAPC13Q9BS18 74 aa14.13□□□□□ -0.15
CTF1-202ENST00000395019 PRR15Q8IV56 129 aa14.12□□□□□ -0.15
CTF1-202ENST00000395019 LINC00304Q8N9R0 145 aa14.12□□□□□ -0.15
CTF1-202ENST00000395019 LIMD2Q9BT23 127 aa14.12□□□□□ -0.15
CTF1-202ENST00000395019 SPAG11AQ6PDA7 123 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms