RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PDE6GP18545 87 aa5.3□□□□□ -1.56
TDP1-203ENST00000393454 KMT2CQ8NEZ4 4911 aaKnown RBP5.3□□□□□ -1.56
TDP1-203ENST00000393454 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
TDP1-203ENST00000393454 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
TDP1-203ENST00000393454 RYR2Q92736 4967 aa5.29□□□□□ -1.56
TDP1-203ENST00000393454 A0A1B0GVY2 172 aa5.28□□□□□ -1.56
TDP1-203ENST00000393454 ZNF861PO60384 105 aa5.28□□□□□ -1.56
TDP1-203ENST00000393454 XGP55808 180 aa5.28□□□□□ -1.56
TDP1-203ENST00000393454 SMIM29Q86T20 159 aa5.28□□□□□ -1.56
TDP1-203ENST00000393454 MT-ATP8P03928 68 aa5.27□□□□□ -1.57
TDP1-203ENST00000393454 IGLV7-43P04211 117 aa5.27□□□□□ -1.57
TDP1-203ENST00000393454 LINC00846Q9NV44 126 aa5.27□□□□□ -1.57
TDP1-203ENST00000393454 SPRR1BP22528 89 aa5.26□□□□□ -1.57
TDP1-203ENST00000393454 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
TDP1-203ENST00000393454 SPRR4Q96PI1 79 aa5.25□□□□□ -1.57
TDP1-203ENST00000393454 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
TDP1-203ENST00000393454 RYR3Q15413 4870 aa5.24□□□□□ -1.57
TDP1-203ENST00000393454 UBL5Q9BZL1 73 aa5.24□□□□□ -1.57
TDP1-203ENST00000393454 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
TDP1-203ENST00000393454 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
TDP1-203ENST00000393454 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
TDP1-203ENST00000393454 LRP1BQ9NZR2 4599 aa5.23□□□□□ -1.57
TDP1-203ENST00000393454 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
TDP1-203ENST00000393454 A0A1W2PNM2 257 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 C9orf153Q5TBE3 101 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 IGFL1Q6UW32 110 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 IGLV8-61A0A075B6I0 122 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 Q8NBF4 154 aa5.22□□□□□ -1.57
TDP1-203ENST00000393454 IGKV3D-7A0A0C4DH55 119 aa5.21□□□□□ -1.58
TDP1-203ENST00000393454 Q6JHZ5 121 aa5.21□□□□□ -1.58
TDP1-203ENST00000393454 SMR3BP02814 79 aaPredicted RBP5.2□□□□□ -1.58
TDP1-203ENST00000393454 Q6ZVQ6 151 aa5.2□□□□□ -1.58
TDP1-203ENST00000393454 RPL37AP61513 92 aaKnown RBP5.19□□□□□ -1.58
TDP1-203ENST00000393454 NREPQ16612 68 aa5.19□□□□□ -1.58
TDP1-203ENST00000393454 A0A1B0GW54 56 aa5.18□□□□□ -1.58
TDP1-203ENST00000393454 CRYGAP11844 174 aa5.18□□□□□ -1.58
TDP1-203ENST00000393454 MOBPQ13875 183 aa5.18□□□□□ -1.58
TDP1-203ENST00000393454 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
TDP1-203ENST00000393454 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
TDP1-203ENST00000393454 A0A087WSZ3 146 aa5.16□□□□□ -1.58
TDP1-203ENST00000393454 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
TDP1-203ENST00000393454 Q6Q795 121 aa5.16□□□□□ -1.58
TDP1-203ENST00000393454 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
TDP1-203ENST00000393454 IMUPQ9GZP8 106 aa5.16□□□□□ -1.58
TDP1-203ENST00000393454 APOBP04114 4563 aaKnown RBP5.15□□□□□ -1.58
TDP1-203ENST00000393454 SCGB1A1P11684 91 aa5.15□□□□□ -1.59
TDP1-203ENST00000393454 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
TDP1-203ENST00000393454 BPY2O14599 106 aa5.13□□□□□ -1.59
TDP1-203ENST00000393454 CXCL6P80162 114 aa5.13□□□□□ -1.59
TDP1-203ENST00000393454 SPINK6Q6UWN8 80 aa5.12□□□□□ -1.59
TDP1-203ENST00000393454 A0A087WVE0 104 aa5.12□□□□□ -1.59
TDP1-203ENST00000393454 A0A087X002 238 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
TDP1-203ENST00000393454 PCP4P48539 62 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 FAM229BQ4G0N7 80 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 FAM236AA0A1B0GUQ0 79 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 FAM236BA0A1B0GV22 79 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 DEFB116Q30KQ4 102 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
TDP1-203ENST00000393454 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
TDP1-203ENST00000393454 FAT1Q14517 4588 aa5.1□□□□□ -1.59
TDP1-203ENST00000393454 KRTAP13-2Q52LG2 175 aa5.09□□□□□ -1.59
TDP1-203ENST00000393454 Q8N9L7 120 aa5.09□□□□□ -1.59
TDP1-203ENST00000393454 FAM229AH3BQW9 127 aa5.09□□□□□ -1.59
TDP1-203ENST00000393454 CDK2AP2O75956 126 aa5.08□□□□□ -1.6
TDP1-203ENST00000393454 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
TDP1-203ENST00000393454 SS18L2Q9UHA2 77 aa5.08□□□□□ -1.6
TDP1-203ENST00000393454 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
TDP1-203ENST00000393454 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
TDP1-203ENST00000393454 DSCR10P59022 87 aa5.06□□□□□ -1.6
TDP1-203ENST00000393454 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
TDP1-203ENST00000393454 IGKV4-1P06312 121 aa5.06□□□□□ -1.6
TDP1-203ENST00000393454 CD164Q04900 197 aa5.06□□□□□ -1.6
TDP1-203ENST00000393454 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
TDP1-203ENST00000393454 PRR26Q8N8Z3 221 aa5.05□□□□□ -1.6
TDP1-203ENST00000393454 K7EQZ3 153 aa5.04□□□□□ -1.6
TDP1-203ENST00000393454 Q5VSD8 79 aa5.04□□□□□ -1.6
TDP1-203ENST00000393454 J3KT08 172 aa5.03□□□□□ -1.6
TDP1-203ENST00000393454 ATOX1O00244 68 aa5.03□□□□□ -1.6
TDP1-203ENST00000393454 Q96NJ1 140 aa5.03□□□□□ -1.6
TDP1-203ENST00000393454 A8MWP4 228 aa5.01□□□□□ -1.61
TDP1-203ENST00000393454 NDUFB1O75438 58 aa5.01□□□□□ -1.61
TDP1-203ENST00000393454 HSPG2P98160 4391 aa5.01□□□□□ -1.61
TDP1-203ENST00000393454 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
TDP1-203ENST00000393454 PRR15Q8IV56 129 aa5□□□□□ -1.61
TDP1-203ENST00000393454 LINC00304Q8N9R0 145 aa5□□□□□ -1.61
TDP1-203ENST00000393454 LIMD2Q9BT23 127 aa5□□□□□ -1.61
TDP1-203ENST00000393454 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
TDP1-203ENST00000393454 RYR1P21817 5038 aa4.99□□□□□ -1.61
TDP1-203ENST00000393454 SPINK1P00995 79 aa4.98□□□□□ -1.61
TDP1-203ENST00000393454 WFDC13Q8IUB5 93 aa4.98□□□□□ -1.61
TDP1-203ENST00000393454 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
TDP1-203ENST00000393454 IGHV6-1A0A0B4J1U7 121 aa4.97□□□□□ -1.61
TDP1-203ENST00000393454 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
TDP1-203ENST00000393454 Q5XG85 94 aa4.96□□□□□ -1.61
TDP1-203ENST00000393454 SPAG11AQ6PDA7 123 aa4.96□□□□□ -1.61
TDP1-203ENST00000393454 SERP2Q8N6R1 65 aa4.96□□□□□ -1.61
TDP1-203ENST00000393454 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms