RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 TNP2Q05952 138 aa8.21□□□□□ -1.1
PLXNA1-201ENST00000393409 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
PLXNA1-201ENST00000393409 TRANK1O15050 2925 aa8.2□□□□□ -1.1
PLXNA1-201ENST00000393409 MAP1AP78559 2803 aaPredicted RBP8.19□□□□□ -1.1
PLXNA1-201ENST00000393409 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
PLXNA1-201ENST00000393409 MMP24-AS1A0A0U1RRL7 71 aa8.18□□□□□ -1.1
PLXNA1-201ENST00000393409 LAMA2P24043 3122 aaKnown RBP8.15□□□□□ -1.11
PLXNA1-201ENST00000393409 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
PLXNA1-201ENST00000393409 SPRR1AP35321 89 aa8.14□□□□□ -1.11
PLXNA1-201ENST00000393409 CASC10Q5T4H9 136 aa8.14□□□□□ -1.11
PLXNA1-201ENST00000393409 OXTP01178 125 aa8.13□□□□□ -1.11
PLXNA1-201ENST00000393409 CHD7Q9P2D1 2997 aa8.13□□□□□ -1.11
PLXNA1-201ENST00000393409 TEP1Q99973 2627 aaKnown RBP8.12□□□□□ -1.11
PLXNA1-201ENST00000393409 SETXQ7Z333 2677 aaKnown RBP8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
PLXNA1-201ENST00000393409 SPINK7P58062 85 aa8.09□□□□□ -1.11
PLXNA1-201ENST00000393409 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
PLXNA1-201ENST00000393409 Q6ZSA8 131 aa8.07□□□□□ -1.12
PLXNA1-201ENST00000393409 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
PLXNA1-201ENST00000393409 SPRR1BP22528 89 aa8.05□□□□□ -1.12
PLXNA1-201ENST00000393409 Q5W150 140 aa8.05□□□□□ -1.12
PLXNA1-201ENST00000393409 ZNF292O60281 2723 aa8.04□□□□□ -1.12
PLXNA1-201ENST00000393409 Q8NDZ9 215 aa8.04□□□□□ -1.12
PLXNA1-201ENST00000393409 STAB2Q8WWQ8 2551 aa8.03□□□□□ -1.12
PLXNA1-201ENST00000393409 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
PLXNA1-201ENST00000393409 APCP25054 2843 aa8.02□□□□□ -1.13
PLXNA1-201ENST00000393409 Q6ZR54 194 aa8□□□□□ -1.13
PLXNA1-201ENST00000393409 DSPP15924 2871 aaKnown RBP8□□□□□ -1.13
PLXNA1-201ENST00000393409 ROMO1P60602 79 aa7.99□□□□□ -1.13
PLXNA1-201ENST00000393409 ITPR2Q14571 2701 aa7.99□□□□□ -1.13
PLXNA1-201ENST00000393409 S4R3F8 94 aa7.98□□□□□ -1.13
PLXNA1-201ENST00000393409 MGAQ8IWI9 3026 aa7.98□□□□□ -1.13
PLXNA1-201ENST00000393409 M0R2T5 61 aa7.96□□□□□ -1.13
PLXNA1-201ENST00000393409 ITPR1Q14643 2758 aa7.96□□□□□ -1.13
PLXNA1-201ENST00000393409 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
PLXNA1-201ENST00000393409 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
PLXNA1-201ENST00000393409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
PLXNA1-201ENST00000393409 BAHCC1Q9P281 2608 aa7.95□□□□□ -1.14
PLXNA1-201ENST00000393409 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
PLXNA1-201ENST00000393409 CHD9Q3L8U1 2897 aa7.94□□□□□ -1.14
PLXNA1-201ENST00000393409 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
PLXNA1-201ENST00000393409 RPL37P61927 97 aaKnown RBP7.92□□□□□ -1.14
PLXNA1-201ENST00000393409 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
PLXNA1-201ENST00000393409 KRTAP26-1Q6PEX3 210 aa7.91□□□□□ -1.14
PLXNA1-201ENST00000393409 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.14
PLXNA1-201ENST00000393409 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
PLXNA1-201ENST00000393409 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
PLXNA1-201ENST00000393409 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
PLXNA1-201ENST00000393409 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
PLXNA1-201ENST00000393409 A6NN06 94 aa7.85□□□□□ -1.15
PLXNA1-201ENST00000393409 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
PLXNA1-201ENST00000393409 LCE6AA0A183 80 aa7.82□□□□□ -1.16
PLXNA1-201ENST00000393409 MKI67P46013 3256 aaKnown RBP7.81□□□□□ -1.16
PLXNA1-201ENST00000393409 NSD1Q96L73 2696 aaPredicted RBP7.81□□□□□ -1.16
PLXNA1-201ENST00000393409 R4GN34 69 aa7.8□□□□□ -1.16
PLXNA1-201ENST00000393409 UTP20O75691 2785 aaKnown RBP7.8□□□□□ -1.16
PLXNA1-201ENST00000393409 TRIOO75962 3097 aa7.79□□□□□ -1.16
PLXNA1-201ENST00000393409 KALRNO60229 2985 aa7.79□□□□□ -1.16
PLXNA1-201ENST00000393409 LRBAP50851 2863 aa7.74□□□□□ -1.17
PLXNA1-201ENST00000393409 NBEAQ8NFP9 2946 aa7.73□□□□□ -1.17
PLXNA1-201ENST00000393409 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
PLXNA1-201ENST00000393409 UBR5O95071 2799 aaPredicted RBP7.71□□□□□ -1.17
PLXNA1-201ENST00000393409 RANBP2P49792 3224 aaKnown RBP7.71□□□□□ -1.17
PLXNA1-201ENST00000393409 IGSF10Q6WRI0 2623 aa7.71□□□□□ -1.17
PLXNA1-201ENST00000393409 HTTP42858 3142 aa7.7□□□□□ -1.18
PLXNA1-201ENST00000393409 Q5VSD8 79 aa7.67□□□□□ -1.18
PLXNA1-201ENST00000393409 TACC2O95359 2948 aa7.67□□□□□ -1.18
PLXNA1-201ENST00000393409 WDFY4Q6ZS81 3184 aa7.66□□□□□ -1.18
PLXNA1-201ENST00000393409 PANO1I0J062 215 aa7.66□□□□□ -1.18
PLXNA1-201ENST00000393409 XIRP2A4UGR9 3374 aa7.66□□□□□ -1.18
PLXNA1-201ENST00000393409 FRYLO94915 3013 aa7.65□□□□□ -1.19
PLXNA1-201ENST00000393409 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
PLXNA1-201ENST00000393409 M0QZ58 72 aa7.63□□□□□ -1.19
PLXNA1-201ENST00000393409 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
PLXNA1-201ENST00000393409 FLNCQ14315 2725 aa7.62□□□□□ -1.19
PLXNA1-201ENST00000393409 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
PLXNA1-201ENST00000393409 LAMA3Q16787 3333 aa7.59□□□□□ -1.19
PLXNA1-201ENST00000393409 FREM2Q5SZK8 3169 aa7.59□□□□□ -1.2
PLXNA1-201ENST00000393409 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
PLXNA1-201ENST00000393409 ASH1LQ9NR48 2969 aaKnown RBP7.58□□□□□ -1.2
PLXNA1-201ENST00000393409 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
PLXNA1-201ENST00000393409 DNAH14Q0VDD8 3507 aa7.56□□□□□ -1.2
PLXNA1-201ENST00000393409 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
PLXNA1-201ENST00000393409 BRCA2P51587 3418 aa7.54□□□□□ -1.2
PLXNA1-201ENST00000393409 LAMA1P25391 3075 aa7.53□□□□□ -1.2
PLXNA1-201ENST00000393409 CELSR3Q9NYQ7 3312 aa7.53□□□□□ -1.2
PLXNA1-201ENST00000393409 HIVEP1P15822 2718 aa7.48□□□□□ -1.21
PLXNA1-201ENST00000393409 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
PLXNA1-201ENST00000393409 NIPBLQ6KC79 2804 aaeCLIP7.46□□□□□ -1.223e-6■■■■□ 23
PLXNA1-201ENST00000393409 KRTAP10-1P60331 282 aa7.45□□□□□ -1.22
PLXNA1-201ENST00000393409 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
PLXNA1-201ENST00000393409 A8MU10 97 aa7.41□□□□□ -1.22
PLXNA1-201ENST00000393409 CDH23Q9H251 3354 aa7.41□□□□□ -1.22
PLXNA1-201ENST00000393409 USP34Q70CQ2 3546 aa7.4□□□□□ -1.23
PLXNA1-201ENST00000393409 CELSR2Q9HCU4 2923 aa7.39□□□□□ -1.23
PLXNA1-201ENST00000393409 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms