RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GIG44P09565 113 aaPredicted RBP9.31□□□□□ -0.92
CCDC50-201ENST00000392455 FLNAP21333 2647 aaKnown RBP9.31□□□□□ -0.92
CCDC50-201ENST00000392455 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
CCDC50-201ENST00000392455 A0A096LNT2 108 aa9.23□□□□□ -0.93
CCDC50-201ENST00000392455 ITPR3Q14573 2671 aa9.21□□□□□ -0.94
CCDC50-201ENST00000392455 Q5VV11 94 aa9.2□□□□□ -0.94
CCDC50-201ENST00000392455 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
CCDC50-201ENST00000392455 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
CCDC50-201ENST00000392455 UTRNP46939 3433 aa9.13□□□□□ -0.95
CCDC50-201ENST00000392455 HELZ2Q9BYK8 2649 aaKnown RBP9.13□□□□□ -0.95
CCDC50-201ENST00000392455 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
CCDC50-201ENST00000392455 Q5W150 140 aa9.12□□□□□ -0.95
CCDC50-201ENST00000392455 C5orf42Q9H799 3197 aa9.11□□□□□ -0.95
CCDC50-201ENST00000392455 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
CCDC50-201ENST00000392455 M0QZ58 72 aa9.1□□□□□ -0.95
CCDC50-201ENST00000392455 PRAC1Q96KF2 57 aa9.09□□□□□ -0.95
CCDC50-201ENST00000392455 Q5XG85 94 aa9.09□□□□□ -0.95
CCDC50-201ENST00000392455 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
CCDC50-201ENST00000392455 CHD6Q8TD26 2715 aa9.08□□□□□ -0.96
CCDC50-201ENST00000392455 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
CCDC50-201ENST00000392455 PLAC8Q9NZF1 115 aa9.07□□□□□ -0.96
CCDC50-201ENST00000392455 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
CCDC50-201ENST00000392455 TEX15Q9BXT5 2789 aa9.03□□□□□ -0.96
CCDC50-201ENST00000392455 SPRR1BP22528 89 aa9.02□□□□□ -0.97
CCDC50-201ENST00000392455 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
CCDC50-201ENST00000392455 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
CCDC50-201ENST00000392455 OXTP01178 125 aa8.99□□□□□ -0.97
CCDC50-201ENST00000392455 SPRR1AP35321 89 aa8.98□□□□□ -0.97
CCDC50-201ENST00000392455 Q6ZR54 194 aa8.95□□□□□ -0.98
CCDC50-201ENST00000392455 PANO1I0J062 215 aa8.93□□□□□ -0.98
CCDC50-201ENST00000392455 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
CCDC50-201ENST00000392455 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
CCDC50-201ENST00000392455 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.98
CCDC50-201ENST00000392455 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
CCDC50-201ENST00000392455 A0A087X002 238 aa8.89□□□□□ -0.99
CCDC50-201ENST00000392455 SPATA8Q6RVD6 105 aa8.89□□□□□ -0.99
CCDC50-201ENST00000392455 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
CCDC50-201ENST00000392455 Q8NDZ9 215 aa8.85□□□□□ -0.99
CCDC50-201ENST00000392455 PCNTO95613 3336 aa8.82□□□□□ -1
CCDC50-201ENST00000392455 TEP1Q99973 2627 aaKnown RBP8.82□□□□□ -1
CCDC50-201ENST00000392455 IGSF10Q6WRI0 2623 aa8.8□□□□□ -1
CCDC50-201ENST00000392455 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
CCDC50-201ENST00000392455 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
CCDC50-201ENST00000392455 SETXQ7Z333 2677 aaKnown RBP8.76□□□□□ -1.01
CCDC50-201ENST00000392455 NSD1Q96L73 2696 aaPredicted RBP8.75□□□□□ -1.01
CCDC50-201ENST00000392455 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
CCDC50-201ENST00000392455 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
CCDC50-201ENST00000392455 TNP1P09430 55 aa8.73□□□□□ -1.01
CCDC50-201ENST00000392455 Q5VSD8 79 aa8.73□□□□□ -1.01
CCDC50-201ENST00000392455 CFAP54Q96N23 3096 aa8.68□□□□□ -1.02
CCDC50-201ENST00000392455 A8MUU9 505 aa8.67□□□□□ -1.02
CCDC50-201ENST00000392455 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
CCDC50-201ENST00000392455 APCP25054 2843 aa8.65□□□□□ -1.03
CCDC50-201ENST00000392455 A6NN06 94 aa8.61□□□□□ -1.03
CCDC50-201ENST00000392455 KRTAP1-5Q9BYS1 174 aa8.61□□□□□ -1.03
CCDC50-201ENST00000392455 CYSTM1Q9H1C7 97 aa8.6□□□□□ -1.03
CCDC50-201ENST00000392455 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
CCDC50-201ENST00000392455 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
CCDC50-201ENST00000392455 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
CCDC50-201ENST00000392455 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
CCDC50-201ENST00000392455 ZNF292O60281 2723 aa8.56□□□□□ -1.04
CCDC50-201ENST00000392455 KRTAP29-1A8MX34 341 aaPredicted RBP8.55□□□□□ -1.04
CCDC50-201ENST00000392455 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
CCDC50-201ENST00000392455 LCE6AA0A183 80 aa8.52□□□□□ -1.05
CCDC50-201ENST00000392455 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
CCDC50-201ENST00000392455 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
CCDC50-201ENST00000392455 XIRP2A4UGR9 3374 aa8.47□□□□□ -1.05
CCDC50-201ENST00000392455 A0A0C4DFX4 3053 aa8.44□□□□□ -1.06
CCDC50-201ENST00000392455 MGAQ8IWI9 3026 aa8.42□□□□□ -1.06
CCDC50-201ENST00000392455 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
CCDC50-201ENST00000392455 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
CCDC50-201ENST00000392455 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
CCDC50-201ENST00000392455 TRIOO75962 3097 aa8.37□□□□□ -1.07
CCDC50-201ENST00000392455 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
CCDC50-201ENST00000392455 P0C880 135 aa8.34□□□□□ -1.07
CCDC50-201ENST00000392455 UBR5O95071 2799 aaPredicted RBP8.33□□□□□ -1.08
CCDC50-201ENST00000392455 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
CCDC50-201ENST00000392455 CELSR3Q9NYQ7 3312 aa8.31□□□□□ -1.08
CCDC50-201ENST00000392455 LAMA3Q16787 3333 aa8.31□□□□□ -1.08
CCDC50-201ENST00000392455 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
CCDC50-201ENST00000392455 A8MU10 97 aa8.29□□□□□ -1.08
CCDC50-201ENST00000392455 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
CCDC50-201ENST00000392455 BRCA2P51587 3418 aa8.27□□□□□ -1.09
CCDC50-201ENST00000392455 PRUNE2Q8WUY3 3088 aa8.25□□□□□ -1.09
CCDC50-201ENST00000392455 TRANK1O15050 2925 aa8.24□□□□□ -1.09
CCDC50-201ENST00000392455 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
CCDC50-201ENST00000392455 HTTP42858 3142 aa8.23□□□□□ -1.09
CCDC50-201ENST00000392455 RANBP2P49792 3224 aaKnown RBP8.23□□□□□ -1.09
CCDC50-201ENST00000392455 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
CCDC50-201ENST00000392455 WDFY4Q6ZS81 3184 aa8.22□□□□□ -1.09
CCDC50-201ENST00000392455 DSPP15924 2871 aaKnown RBP8.2□□□□□ -1.1
CCDC50-201ENST00000392455 DNAH14Q0VDD8 3507 aa8.2□□□□□ -1.1
CCDC50-201ENST00000392455 VPS13AQ96RL7 3174 aa8.18□□□□□ -1.1
CCDC50-201ENST00000392455 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
CCDC50-201ENST00000392455 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
CCDC50-201ENST00000392455 CDH23Q9H251 3354 aa8.16□□□□□ -1.1
CCDC50-201ENST00000392455 FREM2Q5SZK8 3169 aa8.15□□□□□ -1.1
CCDC50-201ENST00000392455 UNC80Q8N2C7 3258 aa8.12□□□□□ -1.11
CCDC50-201ENST00000392455 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
CCDC50-201ENST00000392455 KRTAP21-3Q3LHN1 58 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 403.8 ms