RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TP53AIP1Q9HCN2 124 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 TENM4Q6N022 2769 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 CELSR3Q9NYQ7 3312 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 ZFHX2Q9C0A1 2572 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-205ENST00000391970 MAP1BP46821 2468 aaKnown RBP1.22□□□□□ -2.21
PTPRC-205ENST00000391970 TRGV1A0A0A0MS02 117 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 A0A0G2JQZ4 141 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 DEFB108AA8MXU0 73 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 J3QKU1 62 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
PTPRC-205ENST00000391970 MKI67P46013 3256 aaKnown RBP1.22□□□□□ -2.21
PTPRC-205ENST00000391970 SPG11Q96JI7 2443 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
PTPRC-205ENST00000391970 FBN1P35555 2871 aaKnown RBP1.21□□□□□ -2.22
PTPRC-205ENST00000391970 NBDYA0A0U1RRE5 68 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 TFF1P04155 84 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 LEAP2Q969E1 77 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 PRO2289Q9P1D8 64 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 ZZEF1O43149 2961 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 USP34Q70CQ2 3546 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 OTOGQ6ZRI0 2925 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
PTPRC-205ENST00000391970 RYR3Q15413 4870 aa1.21□□□□□ -2.22
PTPRC-205ENST00000391970 EP400Q96L91 3159 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 CHD7Q9P2D1 2997 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 DMDP11532 3685 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 RTTNQ86VV8 2226 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 TPRXLQ17RH7 258 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 KRTAP21-3Q3LHN1 58 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 C4orf3Q8WVX3 66 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 Q96NJ1 140 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 AKAP9Q99996 3911 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 CFAP47Q6ZTR5 3102 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 TTC28Q96AY4 2481 aa1.2□□□□□ -2.22
PTPRC-205ENST00000391970 RYR2Q92736 4967 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 TRIOO75962 3097 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 C5orf42Q9H799 3197 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 BIRC6Q9NR09 4857 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 MMP24-AS1A0A0U1RRL7 71 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 A0A1B0GU69 56 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 VCANP13611 3396 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 DEFB131AP59861 70 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 MINOS1Q5TGZ0 78 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 CCL19Q99731 98 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 PLCE1Q9P212 2302 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 FLNCQ14315 2725 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 BOD1L1Q8NFC6 3051 aa1.19□□□□□ -2.22
PTPRC-205ENST00000391970 OTOGLQ3ZCN5 2332 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 MED13LQ71F56 2210 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 ASXL3Q9C0F0 2248 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 H3BUA1 57 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 ACYP2P14621 99 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 SPRR1AP35321 89 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 COX6B2Q6YFQ2 88 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 PRO3102Q9H379 93 aa1.18□□□□□ -2.22
PTPRC-205ENST00000391970 NEBP20929 6669 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 CNTRLQ7Z7A1 2325 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 POLQO75417 2590 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 FRYLO94915 3013 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 FRYQ5TBA9 3013 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 ATRQ13535 2644 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 FN1P02751 2386 aaKnown RBP1.17□□□□□ -2.22
PTPRC-205ENST00000391970 H0YAA0 97 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 CD52P31358 61 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 PDZD2O15018 2839 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 ZFYVE26Q68DK2 2539 aa1.17□□□□□ -2.22
PTPRC-205ENST00000391970 FLNAP21333 2647 aaKnown RBP1.17□□□□□ -2.22
PTPRC-205ENST00000391970 CELSR2Q9HCU4 2923 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 SDK1Q7Z5N4 2213 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 EPPK1P58107 5090 aaKnown RBP1.16□□□□□ -2.22
PTPRC-205ENST00000391970 HYDINQ4G0P3 5121 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 DNAH12Q6ZR08 3092 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 TECTAO75443 2155 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 SPEGQ15772 3267 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 SPTY2D1-AS1A0A0U1RR47 76 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 CLPSL2Q6UWE3 100 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 C5orf56Q8N8D9 126 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 ABCA13Q86UQ4 5058 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 TENM2Q9NT68 2774 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 HIVEP3Q5T1R4 2406 aa1.16□□□□□ -2.22
PTPRC-205ENST00000391970 URB1O60287 2271 aaKnown RBP1.15□□□□□ -2.22
PTPRC-205ENST00000391970 LAMA3Q16787 3333 aa1.15□□□□□ -2.22
PTPRC-205ENST00000391970 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.22
PTPRC-205ENST00000391970 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 CREBBPQ92793 2442 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 CFAP46Q8IYW2 2715 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 DNHD1Q96M86 4753 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 WDFY3Q8IZQ1 3526 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 SPRR1BP22528 89 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 RPL37AP61513 92 aaKnown RBP1.15□□□□□ -2.23
PTPRC-205ENST00000391970 Q6ZRX8 168 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 SPACA4Q8TDM5 124 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 BSNQ9UPA5 3926 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 AKAP13Q12802 2813 aa1.15□□□□□ -2.23
PTPRC-205ENST00000391970 ASCC3Q8N3C0 2202 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms