RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 TTC37Q6PGP7 1564 aa-0.56□□□□□ -2.5
TRAJ41-201ENST00000390496 WIZO95785 1651 aa-0.56□□□□□ -2.5
TRAJ41-201ENST00000390496 PIK3C2BO00750 1634 aa-0.56□□□□□ -2.5
TRAJ41-201ENST00000390496 PVALEFA0A1B0GWK0 134 aa-0.57□□□□□ -2.5
TRAJ41-201ENST00000390496 C3orf79P0CE67 100 aa-0.57□□□□□ -2.5
TRAJ41-201ENST00000390496 LAMA1P25391 3075 aa-0.57□□□□□ -2.5
TRAJ41-201ENST00000390496 APOBP04114 4563 aaKnown RBP-0.57□□□□□ -2.5
TRAJ41-201ENST00000390496 KALRNO60229 2985 aa-0.57□□□□□ -2.5
TRAJ41-201ENST00000390496 HTTP42858 3142 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 ANK3Q12955 4377 aaKnown RBP-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 VPS13DQ5THJ4 4388 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 UMAD1C9J7I0 102 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 PLXNC1O60486 1568 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 RICTORQ6R327 1708 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 DNAH3Q8TD57 4116 aa-0.58□□□□□ -2.5
TRAJ41-201ENST00000390496 ABCC3O15438 1527 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 GCN1Q92616 2671 aaKnown RBP-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 UBR4Q5T4S7 5183 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 MYO18BQ8IUG5 2567 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 DEFB130BP0DP73 79 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 DEFB130AP0DP74 79 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 DIP2BQ9P265 1576 aa-0.59□□□□□ -2.5
TRAJ41-201ENST00000390496 MAP3K4Q9Y6R4 1608 aa-0.6□□□□□ -2.5
TRAJ41-201ENST00000390496 TEP1Q99973 2627 aaKnown RBP-0.6□□□□□ -2.51
TRAJ41-201ENST00000390496 MUC17Q685J3 4493 aa-0.6□□□□□ -2.51
TRAJ41-201ENST00000390496 NDUFB1O75438 58 aa-0.6□□□□□ -2.51
TRAJ41-201ENST00000390496 ANKRD11Q6UB99 2663 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 CCDC168Q8NDH2 2452 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 ACACAQ13085 2346 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 NDUFA4O00483 81 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 IFI27P40305 119 aaPredicted RBP-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 NREPQ16612 68 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 URB2Q14146 1524 aaKnown RBP-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 ANKRD36CQ5JPF3 1778 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 A0A0C4DFX4 3053 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 USH2AO75445 5202 aa-0.61□□□□□ -2.51
TRAJ41-201ENST00000390496 CFAP43Q8NDM7 1665 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 MAGI3Q5TCQ9 1506 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 SACSQ9NZJ4 4579 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 LCE6AA0A183 80 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 KANTRA0A1W2PQU2 76 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 C9orf92A6NGG3 77 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 SMIM13P0DJ93 91 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 PRLHP81277 87 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 DEFB121Q5J5C9 76 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 ITSN1Q15811 1721 aa-0.62□□□□□ -2.51
TRAJ41-201ENST00000390496 MTORP42345 2549 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 LRRK2Q5S007 2527 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 DEPDC5O75140 1603 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 DNAH11Q96DT5 4516 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 LYNX1G3V0Z9 82 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 H3BUT2 72 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 HMGA1P17096 107 aaKnown RBP-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 S4R3F8 94 aa-0.63□□□□□ -2.51
TRAJ41-201ENST00000390496 MAP3K1Q13233 1512 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 NBEAQ8NFP9 2946 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 A0A087WXM4 84 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 IAPPP10997 89 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 CRIP1P50238 77 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 GNG2P59768 71 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 ST20Q9HBF5 79 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 ITPR3Q14573 2671 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 CEP290O15078 2479 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 HERC2O95714 4834 aa-0.64□□□□□ -2.51
TRAJ41-201ENST00000390496 USP9YO00507 2555 aaPredicted RBP-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 PKD1L2Q7Z442 2459 aa-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 FAM186AA6NE01 2351 aa-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 UACAQ9BZF9 1416 aa-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 ANKRD50Q9ULJ7 1429 aa-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 DNAH1Q9P2D7 4330 aa-0.65□□□□□ -2.51
TRAJ41-201ENST00000390496 ADIRFQ15847 76 aa-0.66□□□□□ -2.52
TRAJ41-201ENST00000390496 ZC3H13Q5T200 1668 aaKnown RBP-0.67□□□□□ -2.52
TRAJ41-201ENST00000390496 BVES-AS1Q5T3Y7 98 aa-0.67□□□□□ -2.52
TRAJ41-201ENST00000390496 DEFB106AQ8N104 65 aa-0.67□□□□□ -2.52
TRAJ41-201ENST00000390496 MED14O60244 1454 aa-0.67□□□□□ -2.52
TRAJ41-201ENST00000390496 ACACBO00763 2458 aa-0.67□□□□□ -2.52
TRAJ41-201ENST00000390496 DEFB110Q30KQ9 67 aa-0.68□□□□□ -2.52
TRAJ41-201ENST00000390496 DNAH2Q9P225 4427 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 NRAPQ86VF7 1730 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 UTP20O75691 2785 aaKnown RBP-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 DEFB131BA0A096LNP1 70 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 ATP5EP2Q5VTU8 51 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 S100A13Q99584 98 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 ERVK-7P63135 1459 aa-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 PARP4Q9UKK3 1724 aaKnown RBP-0.69□□□□□ -2.52
TRAJ41-201ENST00000390496 SMARCA2P51531 1590 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 MGAM2Q2M2H8 2515 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 RNF17Q9BXT8 1623 aaKnown RBP-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 CCDC88BA6NC98 1476 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 CD163L1Q9NR16 1453 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 SPENQ96T58 3664 aaKnown RBP-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 DCAF1Q9Y4B6 1507 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 DNAH8Q96JB1 4490 aa-0.7□□□□□ -2.52
TRAJ41-201ENST00000390496 WDR87Q6ZQQ6 2873 aa-0.71□□□□□ -2.52
TRAJ41-201ENST00000390496 KRTAP19-5Q3LI72 72 aa-0.71□□□□□ -2.52
TRAJ41-201ENST00000390496 ENHOQ6UWT2 76 aa-0.71□□□□□ -2.52
TRAJ41-201ENST00000390496 C18orf32Q8TCD1 76 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 1089 ms