RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 S4R3F8 94 aa9.17□□□□□ -0.94
LRRK1-201ENST00000388948 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
LRRK1-201ENST00000388948 HRES1P13985 223 aa9.14□□□□□ -0.95
LRRK1-201ENST00000388948 LAMA3Q16787 3333 aa9.14□□□□□ -0.95
LRRK1-201ENST00000388948 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
LRRK1-201ENST00000388948 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
LRRK1-201ENST00000388948 A0A0C4DFX4 3053 aa9.12□□□□□ -0.95
LRRK1-201ENST00000388948 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
LRRK1-201ENST00000388948 LINC00483Q53H64 154 aa9.11□□□□□ -0.95
LRRK1-201ENST00000388948 LUZP6Q538Z0 58 aa9.1□□□□□ -0.95
LRRK1-201ENST00000388948 MKI67P46013 3256 aaKnown RBP9.1□□□□□ -0.95
LRRK1-201ENST00000388948 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
LRRK1-201ENST00000388948 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.95
LRRK1-201ENST00000388948 WDFY4Q6ZS81 3184 aa9.09□□□□□ -0.95
LRRK1-201ENST00000388948 A0A1B0GU33 70 aa9.09□□□□□ -0.96
LRRK1-201ENST00000388948 H7BZZ5 65 aa9.08□□□□□ -0.96
LRRK1-201ENST00000388948 GCN1Q92616 2671 aaKnown RBP9.08□□□□□ -0.96
LRRK1-201ENST00000388948 DSPP15924 2871 aaKnown RBP9.07□□□□□ -0.96
LRRK1-201ENST00000388948 STAB2Q8WWQ8 2551 aa9.07□□□□□ -0.96
LRRK1-201ENST00000388948 R4GN34 69 aa9.07□□□□□ -0.96
LRRK1-201ENST00000388948 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
LRRK1-201ENST00000388948 SPINK7P58062 85 aa9.05□□□□□ -0.96
LRRK1-201ENST00000388948 ITPR2Q14571 2701 aa9.04□□□□□ -0.96
LRRK1-201ENST00000388948 LAMA2P24043 3122 aaKnown RBP9.04□□□□□ -0.96
LRRK1-201ENST00000388948 OXTP01178 125 aa9.03□□□□□ -0.96
LRRK1-201ENST00000388948 FRYQ5TBA9 3013 aa9.02□□□□□ -0.96
LRRK1-201ENST00000388948 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
LRRK1-201ENST00000388948 Q1T7F1 81 aa8.99□□□□□ -0.97
LRRK1-201ENST00000388948 IGSF10Q6WRI0 2623 aa8.99□□□□□ -0.97
LRRK1-201ENST00000388948 BRCA2P51587 3418 aa8.98□□□□□ -0.97
LRRK1-201ENST00000388948 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-201ENST00000388948 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
LRRK1-201ENST00000388948 SPRR1AP35321 89 aa8.97□□□□□ -0.97
LRRK1-201ENST00000388948 XIRP2A4UGR9 3374 aa8.96□□□□□ -0.97
LRRK1-201ENST00000388948 OCR1Q9BZK8 76 aa8.96□□□□□ -0.97
LRRK1-201ENST00000388948 MMP24-AS1A0A0U1RRL7 71 aa8.96□□□□□ -0.98
LRRK1-201ENST00000388948 HTTP42858 3142 aa8.94□□□□□ -0.98
LRRK1-201ENST00000388948 Q5W150 140 aa8.92□□□□□ -0.98
LRRK1-201ENST00000388948 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
LRRK1-201ENST00000388948 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
LRRK1-201ENST00000388948 Q8NDZ9 215 aa8.91□□□□□ -0.98
LRRK1-201ENST00000388948 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
LRRK1-201ENST00000388948 NBEAL2Q6ZNJ1 2754 aa8.9□□□□□ -0.99
LRRK1-201ENST00000388948 TRANK1O15050 2925 aa8.89□□□□□ -0.99
LRRK1-201ENST00000388948 REV3LO60673 3130 aa8.89□□□□□ -0.99
LRRK1-201ENST00000388948 SPRR1BP22528 89 aa8.88□□□□□ -0.99
LRRK1-201ENST00000388948 TRIOO75962 3097 aa8.86□□□□□ -0.99
LRRK1-201ENST00000388948 NSD1Q96L73 2696 aaPredicted RBP8.85□□□□□ -0.99
LRRK1-201ENST00000388948 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
LRRK1-201ENST00000388948 M0QZ58 72 aa8.85□□□□□ -0.99
LRRK1-201ENST00000388948 KTN1-AS1Q86SY8 53 aa8.85□□□□□ -0.99
LRRK1-201ENST00000388948 Q6ZR54 194 aa8.84□□□□□ -0.99
LRRK1-201ENST00000388948 LCA10Q71F78 164 aa8.83□□□□□ -1
LRRK1-201ENST00000388948 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
LRRK1-201ENST00000388948 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
LRRK1-201ENST00000388948 PANO1I0J062 215 aa8.8□□□□□ -1
LRRK1-201ENST00000388948 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
LRRK1-201ENST00000388948 KMT2BQ9UMN6 2715 aaPredicted RBP8.78□□□□□ -1
LRRK1-201ENST00000388948 A0A087X002 238 aa8.76□□□□□ -1.01
LRRK1-201ENST00000388948 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
LRRK1-201ENST00000388948 ITPR1Q14643 2758 aa8.71□□□□□ -1.01
LRRK1-201ENST00000388948 CELSR3Q9NYQ7 3312 aa8.71□□□□□ -1.02
LRRK1-201ENST00000388948 Q75L30 129 aa8.68□□□□□ -1.02
LRRK1-201ENST00000388948 FLNCQ14315 2725 aa8.67□□□□□ -1.02
LRRK1-201ENST00000388948 KRTAP21-3Q3LHN1 58 aa8.67□□□□□ -1.02
LRRK1-201ENST00000388948 FREM2Q5SZK8 3169 aa8.67□□□□□ -1.02
LRRK1-201ENST00000388948 TACC2O95359 2948 aa8.66□□□□□ -1.02
LRRK1-201ENST00000388948 UNC80Q8N2C7 3258 aa8.66□□□□□ -1.02
LRRK1-201ENST00000388948 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
LRRK1-201ENST00000388948 FRYLO94915 3013 aa8.66□□□□□ -1.02
LRRK1-201ENST00000388948 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
LRRK1-201ENST00000388948 DMXL2Q8TDJ6 3036 aa8.64□□□□□ -1.03
LRRK1-201ENST00000388948 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
LRRK1-201ENST00000388948 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
LRRK1-201ENST00000388948 TENM4Q6N022 2769 aa8.62□□□□□ -1.03
LRRK1-201ENST00000388948 LAMA1P25391 3075 aa8.58□□□□□ -1.04
LRRK1-201ENST00000388948 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
LRRK1-201ENST00000388948 APCP25054 2843 aa8.56□□□□□ -1.04
LRRK1-201ENST00000388948 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
LRRK1-201ENST00000388948 COL12A1Q99715 3063 aa8.55□□□□□ -1.04
LRRK1-201ENST00000388948 KRTAP4-16G5E9R7 235 aaPredicted RBP8.54□□□□□ -1.04
LRRK1-201ENST00000388948 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
LRRK1-201ENST00000388948 HIVEP1P15822 2718 aa8.54□□□□□ -1.04
LRRK1-201ENST00000388948 ROMO1P60602 79 aa8.52□□□□□ -1.05
LRRK1-201ENST00000388948 KALRNO60229 2985 aa8.52□□□□□ -1.05
LRRK1-201ENST00000388948 SPATA8Q6RVD6 105 aa8.51□□□□□ -1.05
LRRK1-201ENST00000388948 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
LRRK1-201ENST00000388948 ATMQ13315 3056 aa8.49□□□□□ -1.05
LRRK1-201ENST00000388948 VCANP13611 3396 aa8.48□□□□□ -1.05
LRRK1-201ENST00000388948 A8MUU9 505 aa8.47□□□□□ -1.05
LRRK1-201ENST00000388948 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
LRRK1-201ENST00000388948 PRAC1Q96KF2 57 aa8.47□□□□□ -1.05
LRRK1-201ENST00000388948 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.05
LRRK1-201ENST00000388948 NOTCH2NLQ7Z3S9 236 aa8.44□□□□□ -1.06
LRRK1-201ENST00000388948 LRBAP50851 2863 aa8.44□□□□□ -1.06
LRRK1-201ENST00000388948 Q5VV11 94 aa8.44□□□□□ -1.06
LRRK1-201ENST00000388948 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
LRRK1-201ENST00000388948 BOD1L1Q8NFC6 3051 aa8.43□□□□□ -1.06
LRRK1-201ENST00000388948 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
LRRK1-201ENST00000388948 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms