RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 Q6ZQT0 140 aa11.9□□□□□ -0.5
CCM2-202ENST00000381112 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
CCM2-202ENST00000381112 PDE6GP18545 87 aa11.88□□□□□ -0.51
CCM2-202ENST00000381112 ZNF706Q9Y5V0 76 aaPredicted RBP11.88□□□□□ -0.51
CCM2-202ENST00000381112 LINC00483Q53H64 154 aa11.87□□□□□ -0.51
CCM2-202ENST00000381112 ACYP1P07311 99 aa11.85□□□□□ -0.51
CCM2-202ENST00000381112 F8WEM9 126 aa11.85□□□□□ -0.51
CCM2-202ENST00000381112 CDIP1Q9H305 208 aa11.84□□□□□ -0.51
CCM2-202ENST00000381112 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.52
CCM2-202ENST00000381112 IGLV8-61A0A075B6I0 122 aa11.83□□□□□ -0.52
CCM2-202ENST00000381112 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
CCM2-202ENST00000381112 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
CCM2-202ENST00000381112 RPL37AP61513 92 aaKnown RBP11.8□□□□□ -0.52
CCM2-202ENST00000381112 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
CCM2-202ENST00000381112 VPS13BQ7Z7G8 4022 aa11.79□□□□□ -0.52
CCM2-202ENST00000381112 LINC00846Q9NV44 126 aa11.77□□□□□ -0.53
CCM2-202ENST00000381112 ANAPC11Q9NYG5 84 aa11.77□□□□□ -0.53
CCM2-202ENST00000381112 IGFL1Q6UW32 110 aa11.76□□□□□ -0.53
CCM2-202ENST00000381112 A0A1W2PNM2 257 aa11.75□□□□□ -0.53
CCM2-202ENST00000381112 A0A0G2JQZ4 141 aa11.74□□□□□ -0.53
CCM2-202ENST00000381112 Q6JHZ5 121 aa11.73□□□□□ -0.53
CCM2-202ENST00000381112 Q8NBF4 154 aa11.73□□□□□ -0.53
CCM2-202ENST00000381112 IGLV9-49A0A0B4J1Y8 123 aa11.72□□□□□ -0.53
CCM2-202ENST00000381112 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
CCM2-202ENST00000381112 KRTAP10-4P60372 401 aaPredicted RBP11.71□□□□□ -0.53
CCM2-202ENST00000381112 C9orf153Q5TBE3 101 aa11.69□□□□□ -0.54
CCM2-202ENST00000381112 SPINK6Q6UWN8 80 aa11.69□□□□□ -0.54
CCM2-202ENST00000381112 A0A1B0GW54 56 aa11.68□□□□□ -0.54
CCM2-202ENST00000381112 CRYGAP11844 174 aa11.67□□□□□ -0.54
CCM2-202ENST00000381112 MOBPQ13875 183 aa11.67□□□□□ -0.54
CCM2-202ENST00000381112 FAT1Q14517 4588 aa11.66□□□□□ -0.54
CCM2-202ENST00000381112 KRTAP1-4P0C5Y4 121 aa11.66□□□□□ -0.54
CCM2-202ENST00000381112 LINC00643Q86TS7 51 aa11.66□□□□□ -0.54
CCM2-202ENST00000381112 FAM229BQ4G0N7 80 aa11.65□□□□□ -0.54
CCM2-202ENST00000381112 UBL5Q9BZL1 73 aa11.65□□□□□ -0.54
CCM2-202ENST00000381112 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
CCM2-202ENST00000381112 SIGMAR1Q99720 223 aa11.63□□□□□ -0.55
CCM2-202ENST00000381112 Q6Q795 121 aa11.63□□□□□ -0.55
CCM2-202ENST00000381112 A0A087X002 238 aa11.62□□□□□ -0.55
CCM2-202ENST00000381112 Q6ZVQ6 151 aa11.62□□□□□ -0.55
CCM2-202ENST00000381112 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
CCM2-202ENST00000381112 KRTAP13-2Q52LG2 175 aa11.59□□□□□ -0.55
CCM2-202ENST00000381112 HSPG2P98160 4391 aa11.58□□□□□ -0.56
CCM2-202ENST00000381112 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
CCM2-202ENST00000381112 EPPK1P58107 5090 aaKnown RBP11.58□□□□□ -0.56
CCM2-202ENST00000381112 SSBP3-AS1Q7Z2R9 100 aa11.57□□□□□ -0.56
CCM2-202ENST00000381112 A0A087WSZ3 146 aa11.57□□□□□ -0.56
CCM2-202ENST00000381112 TRBV7-7A0A0K0K1E9 115 aa11.57□□□□□ -0.56
CCM2-202ENST00000381112 NREPQ16612 68 aa11.57□□□□□ -0.56
CCM2-202ENST00000381112 RYR1P21817 5038 aa11.55□□□□□ -0.56
CCM2-202ENST00000381112 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
CCM2-202ENST00000381112 PCP4P48539 62 aa11.53□□□□□ -0.56
CCM2-202ENST00000381112 Q5VSD8 79 aa11.53□□□□□ -0.56
CCM2-202ENST00000381112 ATP5EP2Q5VTU8 51 aa11.53□□□□□ -0.56
CCM2-202ENST00000381112 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
CCM2-202ENST00000381112 KRTAP17-1Q9BYP8 105 aa11.5□□□□□ -0.57
CCM2-202ENST00000381112 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
CCM2-202ENST00000381112 CXCL6P80162 114 aa11.48□□□□□ -0.57
CCM2-202ENST00000381112 CD164Q04900 197 aa11.48□□□□□ -0.57
CCM2-202ENST00000381112 IMUPQ9GZP8 106 aa11.46□□□□□ -0.57
CCM2-202ENST00000381112 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.58
CCM2-202ENST00000381112 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
CCM2-202ENST00000381112 BPY2O14599 106 aa11.44□□□□□ -0.58
CCM2-202ENST00000381112 Q8N1X5 172 aa11.43□□□□□ -0.58
CCM2-202ENST00000381112 LINC00472Q9H8W2 130 aa11.41□□□□□ -0.58
CCM2-202ENST00000381112 SS18L2Q9UHA2 77 aa11.41□□□□□ -0.58
CCM2-202ENST00000381112 PKHD1L1Q86WI1 4243 aa11.41□□□□□ -0.58
CCM2-202ENST00000381112 DEFB116Q30KQ4 102 aa11.38□□□□□ -0.59
CCM2-202ENST00000381112 HIST1H4AP62805 103 aaKnown RBP11.37□□□□□ -0.59
CCM2-202ENST00000381112 DSCR10P59022 87 aa11.36□□□□□ -0.59
CCM2-202ENST00000381112 Q96NJ1 140 aa11.36□□□□□ -0.59
CCM2-202ENST00000381112 A0A087WVE0 104 aa11.35□□□□□ -0.59
CCM2-202ENST00000381112 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
CCM2-202ENST00000381112 Q8N9L7 120 aa11.35□□□□□ -0.59
CCM2-202ENST00000381112 Q5XG85 94 aa11.33□□□□□ -0.6
CCM2-202ENST00000381112 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
CCM2-202ENST00000381112 IGKV4-1P06312 121 aa11.32□□□□□ -0.6
CCM2-202ENST00000381112 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
CCM2-202ENST00000381112 LINC00304Q8N9R0 145 aa11.32□□□□□ -0.6
CCM2-202ENST00000381112 J3KT08 172 aa11.3□□□□□ -0.6
CCM2-202ENST00000381112 SPINK1P00995 79 aa11.3□□□□□ -0.6
CCM2-202ENST00000381112 K7EQZ3 153 aa11.29□□□□□ -0.6
CCM2-202ENST00000381112 SPAG11AQ6PDA7 123 aa11.28□□□□□ -0.6
CCM2-202ENST00000381112 FAM236AA0A1B0GUQ0 79 aa11.27□□□□□ -0.6
CCM2-202ENST00000381112 FAM236BA0A1B0GV22 79 aa11.27□□□□□ -0.6
CCM2-202ENST00000381112 LIMD2Q9BT23 127 aa11.27□□□□□ -0.61
CCM2-202ENST00000381112 A8MWP4 228 aa11.25□□□□□ -0.61
CCM2-202ENST00000381112 RPS29P62273 56 aaKnown RBP11.25□□□□□ -0.61
CCM2-202ENST00000381112 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
CCM2-202ENST00000381112 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
CCM2-202ENST00000381112 C1orf195Q5TG92 126 aa11.22□□□□□ -0.61
CCM2-202ENST00000381112 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
CCM2-202ENST00000381112 NDUFB1O75438 58 aa11.19□□□□□ -0.62
CCM2-202ENST00000381112 KRTAP4-5Q9BYR2 181 aa11.19□□□□□ -0.62
CCM2-202ENST00000381112 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
CCM2-202ENST00000381112 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
CCM2-202ENST00000381112 A0A1B0GVX0 72 aa11.15□□□□□ -0.63
CCM2-202ENST00000381112 TNXBP22105 4242 aa11.14□□□□□ -0.63
CCM2-202ENST00000381112 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
CCM2-202ENST00000381112 HCG22E2RYF7 251 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms