RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
SHROOM2-201ENST00000380913 KLK9Q2XQG4 91 aa9.24□□□□□ -0.93
SHROOM2-201ENST00000380913 A0A096LNT2 108 aa9.24□□□□□ -0.93
SHROOM2-201ENST00000380913 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
SHROOM2-201ENST00000380913 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
SHROOM2-201ENST00000380913 KRTAP16-1A8MUX0 517 aa9.16□□□□□ -0.94
SHROOM2-201ENST00000380913 ATRQ13535 2644 aa9.16□□□□□ -0.94
SHROOM2-201ENST00000380913 Q8NDZ9 215 aa9.16□□□□□ -0.94
SHROOM2-201ENST00000380913 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
SHROOM2-201ENST00000380913 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
SHROOM2-201ENST00000380913 LINC00472Q9H8W2 130 aa9.08□□□□□ -0.96
SHROOM2-201ENST00000380913 KRTAP1-3Q8IUG1 177 aa9.06□□□□□ -0.96
SHROOM2-201ENST00000380913 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
SHROOM2-201ENST00000380913 KRTAP26-1Q6PEX3 210 aa9.03□□□□□ -0.96
SHROOM2-201ENST00000380913 MAST4O15021 2626 aa9.03□□□□□ -0.96
SHROOM2-201ENST00000380913 CFAP54Q96N23 3096 aa9.02□□□□□ -0.96
SHROOM2-201ENST00000380913 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
SHROOM2-201ENST00000380913 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
SHROOM2-201ENST00000380913 A8MU10 97 aa9.01□□□□□ -0.97
SHROOM2-201ENST00000380913 KRTAP10-2P60368 255 aa9□□□□□ -0.97
SHROOM2-201ENST00000380913 Q6ZR54 194 aa9□□□□□ -0.97
SHROOM2-201ENST00000380913 A0A0C4DFX4 3053 aa8.99□□□□□ -0.97
SHROOM2-201ENST00000380913 LAMA2P24043 3122 aaKnown RBP8.99□□□□□ -0.97
SHROOM2-201ENST00000380913 OXTP01178 125 aa8.99□□□□□ -0.97
SHROOM2-201ENST00000380913 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
SHROOM2-201ENST00000380913 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
SHROOM2-201ENST00000380913 MKI67P46013 3256 aaKnown RBP8.96□□□□□ -0.98
SHROOM2-201ENST00000380913 FLNBO75369 2602 aaKnown RBP8.95□□□□□ -0.98
SHROOM2-201ENST00000380913 KRTAP1-5Q9BYS1 174 aa8.95□□□□□ -0.98
SHROOM2-201ENST00000380913 SPRR1AP35321 89 aa8.94□□□□□ -0.98
SHROOM2-201ENST00000380913 BRCA2P51587 3418 aa8.94□□□□□ -0.98
SHROOM2-201ENST00000380913 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
SHROOM2-201ENST00000380913 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
SHROOM2-201ENST00000380913 ITPR3Q14573 2671 aa8.92□□□□□ -0.98
SHROOM2-201ENST00000380913 PANO1I0J062 215 aa8.91□□□□□ -0.98
SHROOM2-201ENST00000380913 A8MUU9 505 aa8.89□□□□□ -0.99
SHROOM2-201ENST00000380913 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
SHROOM2-201ENST00000380913 LAMA3Q16787 3333 aa8.86□□□□□ -0.99
SHROOM2-201ENST00000380913 STAB1Q9NY15 2570 aa8.86□□□□□ -0.99
SHROOM2-201ENST00000380913 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
SHROOM2-201ENST00000380913 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
SHROOM2-201ENST00000380913 A0A087X002 238 aa8.84□□□□□ -0.99
SHROOM2-201ENST00000380913 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
SHROOM2-201ENST00000380913 STAB2Q8WWQ8 2551 aa8.83□□□□□ -1
SHROOM2-201ENST00000380913 SPRR1BP22528 89 aa8.82□□□□□ -1
SHROOM2-201ENST00000380913 FLNAP21333 2647 aaKnown RBP8.82□□□□□ -1
SHROOM2-201ENST00000380913 RANBP2P49792 3224 aaKnown RBP8.8□□□□□ -1
SHROOM2-201ENST00000380913 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
SHROOM2-201ENST00000380913 FREM2Q5SZK8 3169 aa8.77□□□□□ -1.01
SHROOM2-201ENST00000380913 PRUNE2Q8WUY3 3088 aa8.76□□□□□ -1.01
SHROOM2-201ENST00000380913 LCE6AA0A183 80 aa8.76□□□□□ -1.01
SHROOM2-201ENST00000380913 CHD6Q8TD26 2715 aa8.75□□□□□ -1.01
SHROOM2-201ENST00000380913 CELSR3Q9NYQ7 3312 aa8.73□□□□□ -1.01
SHROOM2-201ENST00000380913 UNC80Q8N2C7 3258 aa8.71□□□□□ -1.01
SHROOM2-201ENST00000380913 TRIOO75962 3097 aa8.67□□□□□ -1.02
SHROOM2-201ENST00000380913 TNP1P09430 55 aa8.67□□□□□ -1.02
SHROOM2-201ENST00000380913 TEX15Q9BXT5 2789 aa8.65□□□□□ -1.03
SHROOM2-201ENST00000380913 WDFY4Q6ZS81 3184 aa8.62□□□□□ -1.03
SHROOM2-201ENST00000380913 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
SHROOM2-201ENST00000380913 CENPEQ02224 2701 aa8.62□□□□□ -1.03
SHROOM2-201ENST00000380913 A6NN06 94 aa8.62□□□□□ -1.03
SHROOM2-201ENST00000380913 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
SHROOM2-201ENST00000380913 VPS13AQ96RL7 3174 aa8.61□□□□□ -1.03
SHROOM2-201ENST00000380913 HTTP42858 3142 aa8.59□□□□□ -1.03
SHROOM2-201ENST00000380913 CDH23Q9H251 3354 aa8.59□□□□□ -1.04
SHROOM2-201ENST00000380913 DNAH14Q0VDD8 3507 aa8.57□□□□□ -1.04
SHROOM2-201ENST00000380913 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
SHROOM2-201ENST00000380913 MGAQ8IWI9 3026 aa8.57□□□□□ -1.04
SHROOM2-201ENST00000380913 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
SHROOM2-201ENST00000380913 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
SHROOM2-201ENST00000380913 HELZ2Q9BYK8 2649 aaKnown RBP8.55□□□□□ -1.04
SHROOM2-201ENST00000380913 COL6A5A8TX70 2615 aa8.52□□□□□ -1.05
SHROOM2-201ENST00000380913 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
SHROOM2-201ENST00000380913 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
SHROOM2-201ENST00000380913 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
SHROOM2-201ENST00000380913 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
SHROOM2-201ENST00000380913 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
SHROOM2-201ENST00000380913 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
SHROOM2-201ENST00000380913 SZT2Q5T011 3432 aa8.4□□□□□ -1.06
SHROOM2-201ENST00000380913 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
SHROOM2-201ENST00000380913 CHD9Q3L8U1 2897 aa8.39□□□□□ -1.07
SHROOM2-201ENST00000380913 VCANP13611 3396 aa8.39□□□□□ -1.07
SHROOM2-201ENST00000380913 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
SHROOM2-201ENST00000380913 FRYQ5TBA9 3013 aa8.38□□□□□ -1.07
SHROOM2-201ENST00000380913 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
SHROOM2-201ENST00000380913 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
SHROOM2-201ENST00000380913 REV3LO60673 3130 aa8.33□□□□□ -1.08
SHROOM2-201ENST00000380913 TRANK1O15050 2925 aa8.31□□□□□ -1.08
SHROOM2-201ENST00000380913 LAMA1P25391 3075 aa8.31□□□□□ -1.08
SHROOM2-201ENST00000380913 P0C880 135 aa8.29□□□□□ -1.08
SHROOM2-201ENST00000380913 KMT2BQ9UMN6 2715 aaPredicted RBP8.26□□□□□ -1.09
SHROOM2-201ENST00000380913 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
SHROOM2-201ENST00000380913 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
SHROOM2-201ENST00000380913 DSPP15924 2871 aaKnown RBP8.24□□□□□ -1.09
SHROOM2-201ENST00000380913 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
SHROOM2-201ENST00000380913 KALRNO60229 2985 aa8.22□□□□□ -1.09
SHROOM2-201ENST00000380913 CRYBG3Q68DQ2 2970 aa8.21□□□□□ -1.1
SHROOM2-201ENST00000380913 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.1
SHROOM2-201ENST00000380913 COL6A3P12111 3177 aa8.2□□□□□ -1.1
SHROOM2-201ENST00000380913 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms