RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 RANBP2P49792 3224 aaKnown RBP8.22□□□□□ -1.09
GPC6-201ENST00000377047 SPRR1BP22528 89 aa8.22□□□□□ -1.09
GPC6-201ENST00000377047 SPINK7P58062 85 aa8.2□□□□□ -1.1
GPC6-201ENST00000377047 Q5W150 140 aa8.2□□□□□ -1.1
GPC6-201ENST00000377047 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
GPC6-201ENST00000377047 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
GPC6-201ENST00000377047 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
GPC6-201ENST00000377047 MKI67P46013 3256 aaKnown RBP8.16□□□□□ -1.1
GPC6-201ENST00000377047 TEX15Q9BXT5 2789 aa8.16□□□□□ -1.1
GPC6-201ENST00000377047 LAMA3Q16787 3333 aa8.15□□□□□ -1.1
GPC6-201ENST00000377047 TEP1Q99973 2627 aaKnown RBP8.15□□□□□ -1.1
GPC6-201ENST00000377047 Q1T7F1 81 aa8.15□□□□□ -1.11
GPC6-201ENST00000377047 LCA10Q71F78 164 aa8.13□□□□□ -1.11
GPC6-201ENST00000377047 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
GPC6-201ENST00000377047 PANO1I0J062 215 aa8.12□□□□□ -1.11
GPC6-201ENST00000377047 STAB1Q9NY15 2570 aa8.11□□□□□ -1.11
GPC6-201ENST00000377047 TRANK1O15050 2925 aa8.11□□□□□ -1.11
GPC6-201ENST00000377047 R4GN34 69 aa8.11□□□□□ -1.11
GPC6-201ENST00000377047 CFAP54Q96N23 3096 aa8.11□□□□□ -1.11
GPC6-201ENST00000377047 Q6ZR54 194 aa8.1□□□□□ -1.11
GPC6-201ENST00000377047 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
GPC6-201ENST00000377047 ZNF292O60281 2723 aa8.1□□□□□ -1.11
GPC6-201ENST00000377047 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
GPC6-201ENST00000377047 CHD6Q8TD26 2715 aa8.09□□□□□ -1.11
GPC6-201ENST00000377047 AKAP13Q12802 2813 aa8.07□□□□□ -1.12
GPC6-201ENST00000377047 OXTP01178 125 aa8.06□□□□□ -1.12
GPC6-201ENST00000377047 Q75L30 129 aa8.05□□□□□ -1.12
GPC6-201ENST00000377047 BRCA2P51587 3418 aa8.05□□□□□ -1.12
GPC6-201ENST00000377047 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
GPC6-201ENST00000377047 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
GPC6-201ENST00000377047 LINC01558Q9Y6Z2 57 aa8.03□□□□□ -1.12
GPC6-201ENST00000377047 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
GPC6-201ENST00000377047 COL6A5A8TX70 2615 aa8.01□□□□□ -1.13
GPC6-201ENST00000377047 A0A087X002 238 aa8.01□□□□□ -1.13
GPC6-201ENST00000377047 WDFY4Q6ZS81 3184 aa7.99□□□□□ -1.13
GPC6-201ENST00000377047 PRUNE2Q8WUY3 3088 aa7.99□□□□□ -1.13
GPC6-201ENST00000377047 NBEAL1Q6ZS30 2694 aa7.97□□□□□ -1.13
GPC6-201ENST00000377047 M0QZ58 72 aa7.97□□□□□ -1.13
GPC6-201ENST00000377047 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.13
GPC6-201ENST00000377047 IGSF10Q6WRI0 2623 aa7.95□□□□□ -1.14
GPC6-201ENST00000377047 DSPP15924 2871 aaKnown RBP7.94□□□□□ -1.14
GPC6-201ENST00000377047 A0A0C4DFX4 3053 aa7.93□□□□□ -1.14
GPC6-201ENST00000377047 UNC79Q9P2D8 2635 aa7.93□□□□□ -1.14
GPC6-201ENST00000377047 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
GPC6-201ENST00000377047 LAMA2P24043 3122 aaKnown RBP7.92□□□□□ -1.14
GPC6-201ENST00000377047 GCN1Q92616 2671 aaKnown RBP7.92□□□□□ -1.14
GPC6-201ENST00000377047 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
GPC6-201ENST00000377047 TRIOO75962 3097 aa7.9□□□□□ -1.15
GPC6-201ENST00000377047 Q6ZRN7 208 aaPredicted RBP7.89□□□□□ -1.15
GPC6-201ENST00000377047 XIRP2A4UGR9 3374 aa7.89□□□□□ -1.15
GPC6-201ENST00000377047 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
GPC6-201ENST00000377047 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
GPC6-201ENST00000377047 NOTCH1P46531 2555 aa7.87□□□□□ -1.15
GPC6-201ENST00000377047 Q5VV11 94 aa7.86□□□□□ -1.15
GPC6-201ENST00000377047 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
GPC6-201ENST00000377047 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
GPC6-201ENST00000377047 UNC80Q8N2C7 3258 aa7.85□□□□□ -1.15
GPC6-201ENST00000377047 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
GPC6-201ENST00000377047 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
GPC6-201ENST00000377047 CDH23Q9H251 3354 aa7.81□□□□□ -1.16
GPC6-201ENST00000377047 Q5XG85 94 aa7.81□□□□□ -1.16
GPC6-201ENST00000377047 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
GPC6-201ENST00000377047 NBEAL2Q6ZNJ1 2754 aa7.8□□□□□ -1.16
GPC6-201ENST00000377047 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
GPC6-201ENST00000377047 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
GPC6-201ENST00000377047 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
GPC6-201ENST00000377047 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
GPC6-201ENST00000377047 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
GPC6-201ENST00000377047 ROMO1P60602 79 aa7.78□□□□□ -1.16
GPC6-201ENST00000377047 FRYQ5TBA9 3013 aa7.77□□□□□ -1.17
GPC6-201ENST00000377047 MAP1AP78559 2803 aaPredicted RBP7.75□□□□□ -1.17
GPC6-201ENST00000377047 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
GPC6-201ENST00000377047 KRTAP7-1Q8IUC3 87 aa7.75□□□□□ -1.17
GPC6-201ENST00000377047 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
GPC6-201ENST00000377047 VPS13AQ96RL7 3174 aa7.74□□□□□ -1.17
GPC6-201ENST00000377047 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
GPC6-201ENST00000377047 CELSR3Q9NYQ7 3312 aa7.7□□□□□ -1.18
GPC6-201ENST00000377047 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
GPC6-201ENST00000377047 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.18
GPC6-201ENST00000377047 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
GPC6-201ENST00000377047 A8MUU9 505 aa7.65□□□□□ -1.19
GPC6-201ENST00000377047 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
GPC6-201ENST00000377047 ITPR1Q14643 2758 aa7.64□□□□□ -1.19
GPC6-201ENST00000377047 SZT2Q5T011 3432 aa7.63□□□□□ -1.19
GPC6-201ENST00000377047 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
GPC6-201ENST00000377047 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
GPC6-201ENST00000377047 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
GPC6-201ENST00000377047 ATMQ13315 3056 aa7.56□□□□□ -1.2
GPC6-201ENST00000377047 TACC2O95359 2948 aa7.54□□□□□ -1.2
GPC6-201ENST00000377047 KALRNO60229 2985 aa7.53□□□□□ -1.2
GPC6-201ENST00000377047 A8MU10 97 aa7.53□□□□□ -1.2
GPC6-201ENST00000377047 COL6A3P12111 3177 aa7.52□□□□□ -1.21
GPC6-201ENST00000377047 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
GPC6-201ENST00000377047 CRYBG3Q68DQ2 2970 aa7.52□□□□□ -1.21
GPC6-201ENST00000377047 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
GPC6-201ENST00000377047 FRYLO94915 3013 aa7.51□□□□□ -1.21
GPC6-201ENST00000377047 LAMA1P25391 3075 aa7.51□□□□□ -1.21
GPC6-201ENST00000377047 FREM2Q5SZK8 3169 aa7.51□□□□□ -1.21
GPC6-201ENST00000377047 DNAH14Q0VDD8 3507 aa7.51□□□□□ -1.21
GPC6-201ENST00000377047 LRBAP50851 2863 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms