RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
SSBP3-203ENST00000371319 A0A1B0GVY2 172 aa10.68□□□□□ -0.7
SSBP3-203ENST00000371319 HAMPP81172 84 aa10.68□□□□□ -0.7
SSBP3-203ENST00000371319 IGLV8-61A0A075B6I0 122 aa10.66□□□□□ -0.7
SSBP3-203ENST00000371319 ZNF861PO60384 105 aa10.66□□□□□ -0.7
SSBP3-203ENST00000371319 F8WEM9 126 aa10.65□□□□□ -0.7
SSBP3-203ENST00000371319 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
SSBP3-203ENST00000371319 A0A1W2PNM2 257 aa10.65□□□□□ -0.71
SSBP3-203ENST00000371319 IGLV7-43P04211 117 aa10.65□□□□□ -0.71
SSBP3-203ENST00000371319 Q6JHZ5 121 aa10.65□□□□□ -0.71
SSBP3-203ENST00000371319 TRBV7-7A0A0K0K1E9 115 aa10.64□□□□□ -0.71
SSBP3-203ENST00000371319 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
SSBP3-203ENST00000371319 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
SSBP3-203ENST00000371319 UBL5Q9BZL1 73 aa10.62□□□□□ -0.71
SSBP3-203ENST00000371319 Q6Q795 121 aa10.61□□□□□ -0.71
SSBP3-203ENST00000371319 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
SSBP3-203ENST00000371319 Q8NBF4 154 aa10.61□□□□□ -0.71
SSBP3-203ENST00000371319 Q6ZVQ6 151 aa10.6□□□□□ -0.71
SSBP3-203ENST00000371319 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-203ENST00000371319 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
SSBP3-203ENST00000371319 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
SSBP3-203ENST00000371319 LRP1BQ9NZR2 4599 aa10.59□□□□□ -0.71
SSBP3-203ENST00000371319 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
SSBP3-203ENST00000371319 IGKV3D-7A0A0C4DH55 119 aa10.59□□□□□ -0.71
SSBP3-203ENST00000371319 IMUPQ9GZP8 106 aa10.57□□□□□ -0.72
SSBP3-203ENST00000371319 A0A1B0GW54 56 aa10.56□□□□□ -0.72
SSBP3-203ENST00000371319 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
SSBP3-203ENST00000371319 ATP5EP2Q5VTU8 51 aa10.56□□□□□ -0.72
SSBP3-203ENST00000371319 PKHD1P08F94 4074 aa10.54□□□□□ -0.72
SSBP3-203ENST00000371319 CRYGAP11844 174 aa10.53□□□□□ -0.72
SSBP3-203ENST00000371319 PCP4P48539 62 aa10.52□□□□□ -0.73
SSBP3-203ENST00000371319 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
SSBP3-203ENST00000371319 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
SSBP3-203ENST00000371319 NREPQ16612 68 aa10.5□□□□□ -0.73
SSBP3-203ENST00000371319 CXCL6P80162 114 aa10.48□□□□□ -0.73
SSBP3-203ENST00000371319 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
SSBP3-203ENST00000371319 APOBP04114 4563 aaKnown RBP10.46□□□□□ -0.74
SSBP3-203ENST00000371319 RPL37AP61513 92 aaKnown RBP10.46□□□□□ -0.74
SSBP3-203ENST00000371319 MOBPQ13875 183 aa10.44□□□□□ -0.74
SSBP3-203ENST00000371319 A0A087WVE0 104 aa10.43□□□□□ -0.74
SSBP3-203ENST00000371319 A0A087WSZ3 146 aa10.43□□□□□ -0.74
SSBP3-203ENST00000371319 FAM236AA0A1B0GUQ0 79 aa10.43□□□□□ -0.74
SSBP3-203ENST00000371319 FAM236BA0A1B0GV22 79 aa10.43□□□□□ -0.74
SSBP3-203ENST00000371319 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
SSBP3-203ENST00000371319 RYR3Q15413 4870 aa10.42□□□□□ -0.74
SSBP3-203ENST00000371319 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
SSBP3-203ENST00000371319 BPY2O14599 106 aa10.4□□□□□ -0.74
SSBP3-203ENST00000371319 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-203ENST00000371319 KRTAP1-4P0C5Y4 121 aa10.36□□□□□ -0.75
SSBP3-203ENST00000371319 IGKV4-1P06312 121 aa10.35□□□□□ -0.75
SSBP3-203ENST00000371319 FAM229BQ4G0N7 80 aa10.35□□□□□ -0.75
SSBP3-203ENST00000371319 A0A087X002 238 aa10.34□□□□□ -0.75
SSBP3-203ENST00000371319 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
SSBP3-203ENST00000371319 Q8N9L7 120 aa10.34□□□□□ -0.75
SSBP3-203ENST00000371319 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
SSBP3-203ENST00000371319 DSCR10P59022 87 aa10.33□□□□□ -0.76
SSBP3-203ENST00000371319 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-203ENST00000371319 KRTAP13-2Q52LG2 175 aa10.33□□□□□ -0.76
SSBP3-203ENST00000371319 SPINK6Q6UWN8 80 aa10.32□□□□□ -0.76
SSBP3-203ENST00000371319 SSBP3-AS1Q7Z2R9 100 aa10.32□□□□□ -0.76
SSBP3-203ENST00000371319 LINC00472Q9H8W2 130 aa10.31□□□□□ -0.76
SSBP3-203ENST00000371319 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
SSBP3-203ENST00000371319 CD164Q04900 197 aa10.27□□□□□ -0.76
SSBP3-203ENST00000371319 ATOX1O00244 68 aa10.26□□□□□ -0.77
SSBP3-203ENST00000371319 Q96NJ1 140 aa10.26□□□□□ -0.77
SSBP3-203ENST00000371319 K7EQZ3 153 aa10.26□□□□□ -0.77
SSBP3-203ENST00000371319 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SSBP3-203ENST00000371319 SS18L2Q9UHA2 77 aa10.25□□□□□ -0.77
SSBP3-203ENST00000371319 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
SSBP3-203ENST00000371319 PKHD1L1Q86WI1 4243 aa10.23□□□□□ -0.77
SSBP3-203ENST00000371319 J3KT08 172 aa10.19□□□□□ -0.78
SSBP3-203ENST00000371319 CDK2AP2O75956 126 aa10.19□□□□□ -0.78
SSBP3-203ENST00000371319 A8MWP4 228 aa10.18□□□□□ -0.78
SSBP3-203ENST00000371319 HSPG2P98160 4391 aa10.16□□□□□ -0.78
SSBP3-203ENST00000371319 CCDC179H3BU77 68 aa10.16□□□□□ -0.78
SSBP3-203ENST00000371319 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
SSBP3-203ENST00000371319 TYMSOSQ8TAI1 123 aa10.16□□□□□ -0.78
SSBP3-203ENST00000371319 RYR1P21817 5038 aa10.15□□□□□ -0.78
SSBP3-203ENST00000371319 SERP2Q8N6R1 65 aa10.15□□□□□ -0.78
SSBP3-203ENST00000371319 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
SSBP3-203ENST00000371319 COX7CP15954 63 aa10.14□□□□□ -0.79
SSBP3-203ENST00000371319 ASB16-AS1Q495Z4 193 aa10.14□□□□□ -0.79
SSBP3-203ENST00000371319 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
SSBP3-203ENST00000371319 Q5XG85 94 aa10.13□□□□□ -0.79
SSBP3-203ENST00000371319 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
SSBP3-203ENST00000371319 UQCRQO14949 82 aa10.1□□□□□ -0.79
SSBP3-203ENST00000371319 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
SSBP3-203ENST00000371319 TRAV7A0A075B6U4 112 aa10.09□□□□□ -0.79
SSBP3-203ENST00000371319 Q5VSD8 79 aa10.09□□□□□ -0.79
SSBP3-203ENST00000371319 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-203ENST00000371319 NDUFB1O75438 58 aa10.08□□□□□ -0.8
SSBP3-203ENST00000371319 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
SSBP3-203ENST00000371319 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
SSBP3-203ENST00000371319 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
SSBP3-203ENST00000371319 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
SSBP3-203ENST00000371319 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
SSBP3-203ENST00000371319 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
SSBP3-203ENST00000371319 C1orf195Q5TG92 126 aa10.05□□□□□ -0.8
SSBP3-203ENST00000371319 LIMD2Q9BT23 127 aa10.05□□□□□ -0.8
SSBP3-203ENST00000371319 SPINK1P00995 79 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms