RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
SHISA4-201ENST00000362011 SPRR4Q96PI1 79 aa12.44□□□□□ -0.42
SHISA4-201ENST00000362011 LRP1Q07954 4544 aaKnown RBP12.44□□□□□ -0.42
SHISA4-201ENST00000362011 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
SHISA4-201ENST00000362011 H3BT86 120 aa12.42□□□□□ -0.42
SHISA4-201ENST00000362011 TMEM256-PLSCR3K7ERE1 68 aa12.42□□□□□ -0.42
SHISA4-201ENST00000362011 GAGE2AQ6NT46 116 aa12.42□□□□□ -0.42
SHISA4-201ENST00000362011 Q8N377 158 aa12.42□□□□□ -0.42
SHISA4-201ENST00000362011 PKHD1L1Q86WI1 4243 aa12.41□□□□□ -0.42
SHISA4-201ENST00000362011 SPRR1BP22528 89 aa12.4□□□□□ -0.42
SHISA4-201ENST00000362011 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
SHISA4-201ENST00000362011 ANKRD29Q8N6D5 301 aa12.39□□□□□ -0.43
SHISA4-201ENST00000362011 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
SHISA4-201ENST00000362011 F8W1H4 67 aa12.37□□□□□ -0.43
SHISA4-201ENST00000362011 LINC00483Q53H64 154 aa12.37□□□□□ -0.43
SHISA4-201ENST00000362011 UBR4Q5T4S7 5183 aa12.37□□□□□ -0.43
SHISA4-201ENST00000362011 SMCPP49901 116 aaPredicted RBP12.37□□□□□ -0.43
SHISA4-201ENST00000362011 LINC01600Q96MT4 127 aa12.36□□□□□ -0.43
SHISA4-201ENST00000362011 NDUFV3P56181 108 aaKnown RBP12.34□□□□□ -0.43
SHISA4-201ENST00000362011 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
SHISA4-201ENST00000362011 OXTP01178 125 aa12.33□□□□□ -0.44
SHISA4-201ENST00000362011 SMIM29Q86T20 159 aa12.33□□□□□ -0.44
SHISA4-201ENST00000362011 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.44
SHISA4-201ENST00000362011 F8WEM9 126 aa12.31□□□□□ -0.44
SHISA4-201ENST00000362011 KRTAP1-4P0C5Y4 121 aa12.31□□□□□ -0.44
SHISA4-201ENST00000362011 ANAPC11Q9NYG5 84 aa12.31□□□□□ -0.44
SHISA4-201ENST00000362011 FAM229BQ4G0N7 80 aa12.29□□□□□ -0.44
SHISA4-201ENST00000362011 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
SHISA4-201ENST00000362011 IGLV9-49A0A0B4J1Y8 123 aa12.25□□□□□ -0.45
SHISA4-201ENST00000362011 A0A1B0GV72 72 aa12.25□□□□□ -0.45
SHISA4-201ENST00000362011 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
SHISA4-201ENST00000362011 CRYGAP11844 174 aa12.23□□□□□ -0.45
SHISA4-201ENST00000362011 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
SHISA4-201ENST00000362011 A0A087X002 238 aa12.22□□□□□ -0.45
SHISA4-201ENST00000362011 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
SHISA4-201ENST00000362011 ETDBQ3ZM63 59 aa12.22□□□□□ -0.45
SHISA4-201ENST00000362011 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
SHISA4-201ENST00000362011 Q8NBF4 154 aa12.21□□□□□ -0.45
SHISA4-201ENST00000362011 OBSCN-AS1Q96MR7 158 aa12.21□□□□□ -0.45
SHISA4-201ENST00000362011 MOBPQ13875 183 aa12.2□□□□□ -0.46
SHISA4-201ENST00000362011 KRTAP13-2Q52LG2 175 aa12.18□□□□□ -0.46
SHISA4-201ENST00000362011 DSCR8Q96T75 97 aa12.18□□□□□ -0.46
SHISA4-201ENST00000362011 Q6JHZ5 121 aa12.17□□□□□ -0.46
SHISA4-201ENST00000362011 C14orf132Q9NPU4 83 aa12.16□□□□□ -0.46
SHISA4-201ENST00000362011 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
SHISA4-201ENST00000362011 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
SHISA4-201ENST00000362011 IGFL1Q6UW32 110 aa12.14□□□□□ -0.47
SHISA4-201ENST00000362011 SSBP3-AS1Q7Z2R9 100 aa12.14□□□□□ -0.47
SHISA4-201ENST00000362011 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
SHISA4-201ENST00000362011 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
SHISA4-201ENST00000362011 PDE6GP18545 87 aa12.11□□□□□ -0.47
SHISA4-201ENST00000362011 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
SHISA4-201ENST00000362011 Q6ZQT0 140 aa12.1□□□□□ -0.47
SHISA4-201ENST00000362011 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
SHISA4-201ENST00000362011 C21orf62-AS1Q17RA5 79 aa12.09□□□□□ -0.47
SHISA4-201ENST00000362011 CCKP06307 115 aa12.06□□□□□ -0.48
SHISA4-201ENST00000362011 VPS25Q9BRG1 176 aa12.05□□□□□ -0.48
SHISA4-201ENST00000362011 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
SHISA4-201ENST00000362011 Q6Q795 121 aa12.02□□□□□ -0.49
SHISA4-201ENST00000362011 KRTAP10-8P60410 259 aa12.01□□□□□ -0.49
SHISA4-201ENST00000362011 CD164Q04900 197 aa12.01□□□□□ -0.49
SHISA4-201ENST00000362011 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
SHISA4-201ENST00000362011 TNXBP22105 4242 aa12□□□□□ -0.49
SHISA4-201ENST00000362011 LINC00304Q8N9R0 145 aa12□□□□□ -0.49
SHISA4-201ENST00000362011 LRP2P98164 4655 aa12□□□□□ -0.49
SHISA4-201ENST00000362011 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
SHISA4-201ENST00000362011 TRBV7-7A0A0K0K1E9 115 aa11.96□□□□□ -0.49
SHISA4-201ENST00000362011 SPAG11AQ6PDA7 123 aa11.96□□□□□ -0.49
SHISA4-201ENST00000362011 A0A1B0GW54 56 aa11.95□□□□□ -0.5
SHISA4-201ENST00000362011 J3QR89 54 aa11.95□□□□□ -0.5
SHISA4-201ENST00000362011 RNF213Q63HN8 5207 aa11.92□□□□□ -0.5
SHISA4-201ENST00000362011 SPINK1P00995 79 aa11.92□□□□□ -0.5
SHISA4-201ENST00000362011 A0A087WSZ3 146 aa11.91□□□□□ -0.5
SHISA4-201ENST00000362011 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
SHISA4-201ENST00000362011 ACYP1P07311 99 aa11.88□□□□□ -0.51
SHISA4-201ENST00000362011 SS18L2Q9UHA2 77 aa11.88□□□□□ -0.51
SHISA4-201ENST00000362011 RPS29P62273 56 aaKnown RBP11.87□□□□□ -0.51
SHISA4-201ENST00000362011 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
SHISA4-201ENST00000362011 K7ERU9 68 aa11.86□□□□□ -0.51
SHISA4-201ENST00000362011 LINC00846Q9NV44 126 aa11.85□□□□□ -0.51
SHISA4-201ENST00000362011 Q5XG85 94 aa11.84□□□□□ -0.51
SHISA4-201ENST00000362011 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
SHISA4-201ENST00000362011 NREPQ16612 68 aa11.8□□□□□ -0.52
SHISA4-201ENST00000362011 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
SHISA4-201ENST00000362011 Q6ZVQ6 151 aa11.79□□□□□ -0.52
SHISA4-201ENST00000362011 Q96NJ1 140 aa11.72□□□□□ -0.53
SHISA4-201ENST00000362011 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
SHISA4-201ENST00000362011 C1orf195Q5TG92 126 aa11.7□□□□□ -0.54
SHISA4-201ENST00000362011 DEFB116Q30KQ4 102 aa11.68□□□□□ -0.54
SHISA4-201ENST00000362011 CDIP1Q9H305 208 aa11.67□□□□□ -0.54
SHISA4-201ENST00000362011 J3KT08 172 aa11.66□□□□□ -0.54
SHISA4-201ENST00000362011 BPY2O14599 106 aa11.66□□□□□ -0.54
SHISA4-201ENST00000362011 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
SHISA4-201ENST00000362011 LINC00643Q86TS7 51 aa11.65□□□□□ -0.54
SHISA4-201ENST00000362011 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
SHISA4-201ENST00000362011 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
SHISA4-201ENST00000362011 ATP5EP2Q5VTU8 51 aa11.6□□□□□ -0.55
SHISA4-201ENST00000362011 CXCL6P80162 114 aa11.6□□□□□ -0.55
SHISA4-201ENST00000362011 LPAP08519 4548 aa11.58□□□□□ -0.56
SHISA4-201ENST00000362011 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms