RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SPRR1AP35321 89 aa10.25□□□□□ -0.77
COL4A2-201ENST00000360467 BRCA2P51587 3418 aa10.24□□□□□ -0.77
COL4A2-201ENST00000360467 PANO1I0J062 215 aa10.23□□□□□ -0.77
COL4A2-201ENST00000360467 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
COL4A2-201ENST00000360467 DMAC1Q96GE9 116 aa10.21□□□□□ -0.77
COL4A2-201ENST00000360467 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
COL4A2-201ENST00000360467 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
COL4A2-201ENST00000360467 XIRP2A4UGR9 3374 aa10.18□□□□□ -0.78
COL4A2-201ENST00000360467 M0QZ58 72 aa10.17□□□□□ -0.78
COL4A2-201ENST00000360467 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
COL4A2-201ENST00000360467 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
COL4A2-201ENST00000360467 Q75L30 129 aa10.15□□□□□ -0.78
COL4A2-201ENST00000360467 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
COL4A2-201ENST00000360467 HTTP42858 3142 aa10.13□□□□□ -0.79
COL4A2-201ENST00000360467 ATRQ13535 2644 aa10.12□□□□□ -0.79
COL4A2-201ENST00000360467 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
COL4A2-201ENST00000360467 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
COL4A2-201ENST00000360467 CFAP46Q8IYW2 2715 aa10.1□□□□□ -0.79
COL4A2-201ENST00000360467 SPRR1BP22528 89 aa10.09□□□□□ -0.79
COL4A2-201ENST00000360467 RANBP2P49792 3224 aaKnown RBP10.09□□□□□ -0.79
COL4A2-201ENST00000360467 A0A087X002 238 aa10.08□□□□□ -0.8
COL4A2-201ENST00000360467 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
COL4A2-201ENST00000360467 MAST4O15021 2626 aa10.07□□□□□ -0.8
COL4A2-201ENST00000360467 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
COL4A2-201ENST00000360467 SPATA8Q6RVD6 105 aa10.03□□□□□ -0.8
COL4A2-201ENST00000360467 MGAQ8IWI9 3026 aa10.02□□□□□ -0.8
COL4A2-201ENST00000360467 PRUNE2Q8WUY3 3088 aa10.02□□□□□ -0.81
COL4A2-201ENST00000360467 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.81
COL4A2-201ENST00000360467 Q6ZR54 194 aa10.02□□□□□ -0.81
COL4A2-201ENST00000360467 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
COL4A2-201ENST00000360467 OXTP01178 125 aa10.01□□□□□ -0.81
COL4A2-201ENST00000360467 TRIOO75962 3097 aa9.99□□□□□ -0.81
COL4A2-201ENST00000360467 Q5VV11 94 aa9.98□□□□□ -0.81
COL4A2-201ENST00000360467 H1FX-AS1Q4G0G2 97 aa9.96□□□□□ -0.81
COL4A2-201ENST00000360467 LAMA2P24043 3122 aaKnown RBP9.95□□□□□ -0.82
COL4A2-201ENST00000360467 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
COL4A2-201ENST00000360467 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
COL4A2-201ENST00000360467 A0A0C4DFX4 3053 aa9.95□□□□□ -0.82
COL4A2-201ENST00000360467 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
COL4A2-201ENST00000360467 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
COL4A2-201ENST00000360467 Q5XG85 94 aa9.92□□□□□ -0.82
COL4A2-201ENST00000360467 KRTAP11-1Q8IUC1 163 aa9.92□□□□□ -0.82
COL4A2-201ENST00000360467 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
COL4A2-201ENST00000360467 ROMO1P60602 79 aa9.9□□□□□ -0.82
COL4A2-201ENST00000360467 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
COL4A2-201ENST00000360467 DNAH14Q0VDD8 3507 aa9.85□□□□□ -0.83
COL4A2-201ENST00000360467 TEX15Q9BXT5 2789 aa9.85□□□□□ -0.83
COL4A2-201ENST00000360467 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
COL4A2-201ENST00000360467 AKAP13Q12802 2813 aa9.83□□□□□ -0.84
COL4A2-201ENST00000360467 CHD6Q8TD26 2715 aa9.8□□□□□ -0.84
COL4A2-201ENST00000360467 CENPEQ02224 2701 aa9.78□□□□□ -0.84
COL4A2-201ENST00000360467 TEP1Q99973 2627 aaKnown RBP9.77□□□□□ -0.85
COL4A2-201ENST00000360467 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
COL4A2-201ENST00000360467 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
COL4A2-201ENST00000360467 H3BS24 57 aa9.71□□□□□ -0.85
COL4A2-201ENST00000360467 A0A0A0MQY5 61 aa9.71□□□□□ -0.86
COL4A2-201ENST00000360467 A8MUU9 505 aa9.7□□□□□ -0.86
COL4A2-201ENST00000360467 TRANK1O15050 2925 aa9.7□□□□□ -0.86
COL4A2-201ENST00000360467 A8MU10 97 aa9.69□□□□□ -0.86
COL4A2-201ENST00000360467 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
COL4A2-201ENST00000360467 KRTAP29-1A8MX34 341 aaPredicted RBP9.68□□□□□ -0.86
COL4A2-201ENST00000360467 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
COL4A2-201ENST00000360467 COL6A3P12111 3177 aa9.68□□□□□ -0.86
COL4A2-201ENST00000360467 FREM2Q5SZK8 3169 aa9.67□□□□□ -0.86
COL4A2-201ENST00000360467 KRTAP7-1Q8IUC3 87 aa9.67□□□□□ -0.86
COL4A2-201ENST00000360467 NBEAL1Q6ZS30 2694 aa9.64□□□□□ -0.87
COL4A2-201ENST00000360467 STAB1Q9NY15 2570 aa9.63□□□□□ -0.87
COL4A2-201ENST00000360467 FRYQ5TBA9 3013 aa9.61□□□□□ -0.87
COL4A2-201ENST00000360467 VPS13AQ96RL7 3174 aa9.6□□□□□ -0.87
COL4A2-201ENST00000360467 BAHCC1Q9P281 2608 aa9.58□□□□□ -0.88
COL4A2-201ENST00000360467 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
COL4A2-201ENST00000360467 VCANP13611 3396 aa9.57□□□□□ -0.88
COL4A2-201ENST00000360467 DSPP15924 2871 aaKnown RBP9.56□□□□□ -0.88
COL4A2-201ENST00000360467 FLG2Q5D862 2391 aaPredicted RBP9.54□□□□□ -0.88
COL4A2-201ENST00000360467 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
COL4A2-201ENST00000360467 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
COL4A2-201ENST00000360467 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
COL4A2-201ENST00000360467 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
COL4A2-201ENST00000360467 COL6A5A8TX70 2615 aa9.5□□□□□ -0.89
COL4A2-201ENST00000360467 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
COL4A2-201ENST00000360467 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
COL4A2-201ENST00000360467 ZNF292O60281 2723 aa9.49□□□□□ -0.89
COL4A2-201ENST00000360467 SPTBN5Q9NRC6 3674 aaKnown RBP9.48□□□□□ -0.89
COL4A2-201ENST00000360467 IGSF10Q6WRI0 2623 aa9.44□□□□□ -0.9
COL4A2-201ENST00000360467 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
COL4A2-201ENST00000360467 KRTAP13-1Q8IUC0 172 aa9.43□□□□□ -0.9
COL4A2-201ENST00000360467 LAMA1P25391 3075 aa9.43□□□□□ -0.9
COL4A2-201ENST00000360467 CFAP47Q6ZTR5 3102 aa9.42□□□□□ -0.9
COL4A2-201ENST00000360467 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
COL4A2-201ENST00000360467 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
COL4A2-201ENST00000360467 MAP1AP78559 2803 aaPredicted RBP9.38□□□□□ -0.91
COL4A2-201ENST00000360467 KALRNO60229 2985 aa9.37□□□□□ -0.91
COL4A2-201ENST00000360467 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
COL4A2-201ENST00000360467 LRBAP50851 2863 aa9.35□□□□□ -0.91
COL4A2-201ENST00000360467 SPEGQ15772 3267 aa9.32□□□□□ -0.92
COL4A2-201ENST00000360467 KRTAP25-1Q3LHN0 102 aa9.3□□□□□ -0.92
COL4A2-201ENST00000360467 REV3LO60673 3130 aa9.29□□□□□ -0.92
COL4A2-201ENST00000360467 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
COL4A2-201ENST00000360467 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
COL4A2-201ENST00000360467 TNP1P09430 55 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms