RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 MGAQ8IWI9 3026 aa8□□□□□ -1.13
LDLRAD4-201ENST00000359446 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
LDLRAD4-201ENST00000359446 KRTAP1-3Q8IUG1 177 aa7.99□□□□□ -1.13
LDLRAD4-201ENST00000359446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
LDLRAD4-201ENST00000359446 CHD7Q9P2D1 2997 aa7.99□□□□□ -1.13
LDLRAD4-201ENST00000359446 SETXQ7Z333 2677 aaKnown RBP7.99□□□□□ -1.13
LDLRAD4-201ENST00000359446 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
LDLRAD4-201ENST00000359446 S4R3F8 94 aa7.96□□□□□ -1.13
LDLRAD4-201ENST00000359446 HRES1P13985 223 aa7.96□□□□□ -1.14
LDLRAD4-201ENST00000359446 TRIOO75962 3097 aa7.93□□□□□ -1.14
LDLRAD4-201ENST00000359446 H3BS24 57 aa7.93□□□□□ -1.14
LDLRAD4-201ENST00000359446 FAM229BQ4G0N7 80 aa7.93□□□□□ -1.14
LDLRAD4-201ENST00000359446 CELSR3Q9NYQ7 3312 aa7.92□□□□□ -1.14
LDLRAD4-201ENST00000359446 KRTAP1-1Q07627 177 aa7.92□□□□□ -1.14
LDLRAD4-201ENST00000359446 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
LDLRAD4-201ENST00000359446 PRUNE2Q8WUY3 3088 aa7.91□□□□□ -1.14
LDLRAD4-201ENST00000359446 VPS13AQ96RL7 3174 aa7.91□□□□□ -1.14
LDLRAD4-201ENST00000359446 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
LDLRAD4-201ENST00000359446 WIPF1O43516 503 aa7.9□□□□□ -1.14
LDLRAD4-201ENST00000359446 ZCCHC13Q8WW36 166 aaKnown RBP7.9□□□□□ -1.15
LDLRAD4-201ENST00000359446 LAMA3Q16787 3333 aa7.89□□□□□ -1.15
LDLRAD4-201ENST00000359446 STAB2Q8WWQ8 2551 aa7.89□□□□□ -1.15
LDLRAD4-201ENST00000359446 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
LDLRAD4-201ENST00000359446 Q75L30 129 aa7.87□□□□□ -1.15
LDLRAD4-201ENST00000359446 ITPR2Q14571 2701 aa7.86□□□□□ -1.15
LDLRAD4-201ENST00000359446 WDFY4Q6ZS81 3184 aa7.86□□□□□ -1.15
LDLRAD4-201ENST00000359446 R4GN34 69 aa7.86□□□□□ -1.15
LDLRAD4-201ENST00000359446 BRCA2P51587 3418 aa7.86□□□□□ -1.15
LDLRAD4-201ENST00000359446 RANBP2P49792 3224 aaKnown RBP7.85□□□□□ -1.15
LDLRAD4-201ENST00000359446 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
LDLRAD4-201ENST00000359446 ZNF292O60281 2723 aa7.82□□□□□ -1.16
LDLRAD4-201ENST00000359446 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
LDLRAD4-201ENST00000359446 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
LDLRAD4-201ENST00000359446 FRYQ5TBA9 3013 aa7.8□□□□□ -1.16
LDLRAD4-201ENST00000359446 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
LDLRAD4-201ENST00000359446 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
LDLRAD4-201ENST00000359446 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
LDLRAD4-201ENST00000359446 SPINK7P58062 85 aa7.78□□□□□ -1.16
LDLRAD4-201ENST00000359446 Q5W150 140 aa7.78□□□□□ -1.16
LDLRAD4-201ENST00000359446 REV3LO60673 3130 aa7.76□□□□□ -1.17
LDLRAD4-201ENST00000359446 Q5VSD8 79 aa7.76□□□□□ -1.17
LDLRAD4-201ENST00000359446 APCP25054 2843 aa7.74□□□□□ -1.17
LDLRAD4-201ENST00000359446 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
LDLRAD4-201ENST00000359446 TRANK1O15050 2925 aa7.72□□□□□ -1.17
LDLRAD4-201ENST00000359446 DSPP15924 2871 aaKnown RBP7.71□□□□□ -1.17
LDLRAD4-201ENST00000359446 UNC80Q8N2C7 3258 aa7.71□□□□□ -1.18
LDLRAD4-201ENST00000359446 SPRR1AP35321 89 aa7.7□□□□□ -1.18
LDLRAD4-201ENST00000359446 PRAC1Q96KF2 57 aa7.7□□□□□ -1.18
LDLRAD4-201ENST00000359446 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
LDLRAD4-201ENST00000359446 LINC00472Q9H8W2 130 aa7.7□□□□□ -1.18
LDLRAD4-201ENST00000359446 Q8NDZ9 215 aa7.69□□□□□ -1.18
LDLRAD4-201ENST00000359446 M0QZ58 72 aa7.67□□□□□ -1.18
LDLRAD4-201ENST00000359446 KALRNO60229 2985 aa7.67□□□□□ -1.18
LDLRAD4-201ENST00000359446 CDH23Q9H251 3354 aa7.66□□□□□ -1.18
LDLRAD4-201ENST00000359446 Q5VV11 94 aa7.65□□□□□ -1.18
LDLRAD4-201ENST00000359446 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
LDLRAD4-201ENST00000359446 ROMO1P60602 79 aa7.63□□□□□ -1.19
LDLRAD4-201ENST00000359446 H1FX-AS1Q4G0G2 97 aa7.63□□□□□ -1.19
LDLRAD4-201ENST00000359446 CRYBG3Q68DQ2 2970 aa7.62□□□□□ -1.19
LDLRAD4-201ENST00000359446 KRTAP1-5Q9BYS1 174 aa7.62□□□□□ -1.19
LDLRAD4-201ENST00000359446 HTTP42858 3142 aa7.61□□□□□ -1.19
LDLRAD4-201ENST00000359446 SPRR1BP22528 89 aa7.61□□□□□ -1.19
LDLRAD4-201ENST00000359446 KRTAP10-1P60331 282 aa7.6□□□□□ -1.19
LDLRAD4-201ENST00000359446 FP248Q71RG6 208 aaPredicted RBP7.6□□□□□ -1.19
LDLRAD4-201ENST00000359446 Q5XG85 94 aa7.59□□□□□ -1.19
LDLRAD4-201ENST00000359446 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
LDLRAD4-201ENST00000359446 FRYLO94915 3013 aa7.59□□□□□ -1.19
LDLRAD4-201ENST00000359446 CHD9Q3L8U1 2897 aa7.59□□□□□ -1.19
LDLRAD4-201ENST00000359446 KRTAP10-2P60368 255 aa7.59□□□□□ -1.19
LDLRAD4-201ENST00000359446 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.2
LDLRAD4-201ENST00000359446 UBR5O95071 2799 aaPredicted RBP7.58□□□□□ -1.2
LDLRAD4-201ENST00000359446 KRTAP26-1Q6PEX3 210 aa7.57□□□□□ -1.2
LDLRAD4-201ENST00000359446 DMXL2Q8TDJ6 3036 aa7.57□□□□□ -1.2
LDLRAD4-201ENST00000359446 UTP20O75691 2785 aaKnown RBP7.57□□□□□ -1.2
LDLRAD4-201ENST00000359446 LCE6AA0A183 80 aa7.56□□□□□ -1.2
LDLRAD4-201ENST00000359446 LRBAP50851 2863 aa7.56□□□□□ -1.2
LDLRAD4-201ENST00000359446 NSD1Q96L73 2696 aaPredicted RBP7.56□□□□□ -1.2
LDLRAD4-201ENST00000359446 LAMA1P25391 3075 aa7.54□□□□□ -1.2
LDLRAD4-201ENST00000359446 ASH1LQ9NR48 2969 aaKnown RBP7.54□□□□□ -1.2
LDLRAD4-201ENST00000359446 IGSF10Q6WRI0 2623 aa7.52□□□□□ -1.21
LDLRAD4-201ENST00000359446 OXTP01178 125 aa7.51□□□□□ -1.21
LDLRAD4-201ENST00000359446 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
LDLRAD4-201ENST00000359446 COL6A3P12111 3177 aa7.5□□□□□ -1.21
LDLRAD4-201ENST00000359446 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
LDLRAD4-201ENST00000359446 Q6ZR54 194 aa7.48□□□□□ -1.21
LDLRAD4-201ENST00000359446 VCANP13611 3396 aa7.47□□□□□ -1.21
LDLRAD4-201ENST00000359446 ITPR1Q14643 2758 aa7.47□□□□□ -1.21
LDLRAD4-201ENST00000359446 PANO1I0J062 215 aa7.45□□□□□ -1.22
LDLRAD4-201ENST00000359446 CFAP47Q6ZTR5 3102 aa7.44□□□□□ -1.22
LDLRAD4-201ENST00000359446 A0A087X002 238 aa7.44□□□□□ -1.22
LDLRAD4-201ENST00000359446 USP34Q70CQ2 3546 aa7.43□□□□□ -1.22
LDLRAD4-201ENST00000359446 SPEGQ15772 3267 aa7.43□□□□□ -1.22
LDLRAD4-201ENST00000359446 COL12A1Q99715 3063 aa7.43□□□□□ -1.22
LDLRAD4-201ENST00000359446 BOD1L1Q8NFC6 3051 aa7.41□□□□□ -1.22
LDLRAD4-201ENST00000359446 SZT2Q5T011 3432 aa7.39□□□□□ -1.23
LDLRAD4-201ENST00000359446 HIVEP1P15822 2718 aa7.36□□□□□ -1.23
LDLRAD4-201ENST00000359446 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
LDLRAD4-201ENST00000359446 TACC2O95359 2948 aa7.35□□□□□ -1.23
LDLRAD4-201ENST00000359446 A8MUU9 505 aa7.34□□□□□ -1.23
LDLRAD4-201ENST00000359446 C20orf166-AS1Q96NR2 134 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms