RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 KRTAP1-1Q07627 177 aa7.06□□□□□ -1.28
CDK5RAP2-201ENST00000349780 EPG5Q9HCE0 2579 aa7.05□□□□□ -1.28
CDK5RAP2-201ENST00000349780 A0A087WTM6 91 aa7.03□□□□□ -1.28
CDK5RAP2-201ENST00000349780 A8MUU9 505 aa7.02□□□□□ -1.29
CDK5RAP2-201ENST00000349780 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.29
CDK5RAP2-201ENST00000349780 POLQO75417 2590 aa7.02□□□□□ -1.29
CDK5RAP2-201ENST00000349780 MTORP42345 2549 aa7.01□□□□□ -1.29
CDK5RAP2-201ENST00000349780 ACANP16112 2415 aa7□□□□□ -1.29
CDK5RAP2-201ENST00000349780 PANO1I0J062 215 aa6.99□□□□□ -1.29
CDK5RAP2-201ENST00000349780 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
CDK5RAP2-201ENST00000349780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
CDK5RAP2-201ENST00000349780 C5orf42Q9H799 3197 aa6.97□□□□□ -1.29
CDK5RAP2-201ENST00000349780 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
CDK5RAP2-201ENST00000349780 SMR3BP02814 79 aaPredicted RBP6.96□□□□□ -1.29
CDK5RAP2-201ENST00000349780 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
CDK5RAP2-201ENST00000349780 CFAP54Q96N23 3096 aa6.92□□□□□ -1.3
CDK5RAP2-201ENST00000349780 FLNBO75369 2602 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP2-201ENST00000349780 HECTD1Q9ULT8 2610 aa6.9□□□□□ -1.3
CDK5RAP2-201ENST00000349780 S4R3F8 94 aa6.9□□□□□ -1.31
CDK5RAP2-201ENST00000349780 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
CDK5RAP2-201ENST00000349780 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
CDK5RAP2-201ENST00000349780 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
CDK5RAP2-201ENST00000349780 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
CDK5RAP2-201ENST00000349780 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
CDK5RAP2-201ENST00000349780 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
CDK5RAP2-201ENST00000349780 HELZ2Q9BYK8 2649 aaKnown RBP6.76□□□□□ -1.33
CDK5RAP2-201ENST00000349780 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
CDK5RAP2-201ENST00000349780 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
CDK5RAP2-201ENST00000349780 LAMA2P24043 3122 aaKnown RBP6.72□□□□□ -1.33
CDK5RAP2-201ENST00000349780 Q6ZSA8 131 aa6.71□□□□□ -1.34
CDK5RAP2-201ENST00000349780 R4GN34 69 aa6.71□□□□□ -1.34
CDK5RAP2-201ENST00000349780 FREM2Q5SZK8 3169 aa6.69□□□□□ -1.34
CDK5RAP2-201ENST00000349780 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
CDK5RAP2-201ENST00000349780 MGAM2Q2M2H8 2515 aa6.68□□□□□ -1.34
CDK5RAP2-201ENST00000349780 H0YAA0 97 aa6.67□□□□□ -1.34
CDK5RAP2-201ENST00000349780 MKI67P46013 3256 aaKnown RBP6.66□□□□□ -1.34
CDK5RAP2-201ENST00000349780 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
CDK5RAP2-201ENST00000349780 M0QZ58 72 aa6.65□□□□□ -1.34
CDK5RAP2-201ENST00000349780 RANBP2P49792 3224 aaKnown RBP6.65□□□□□ -1.34
CDK5RAP2-201ENST00000349780 TRIOO75962 3097 aa6.64□□□□□ -1.35
CDK5RAP2-201ENST00000349780 FLG2Q5D862 2391 aaPredicted RBP6.63□□□□□ -1.35
CDK5RAP2-201ENST00000349780 FLNAP21333 2647 aaKnown RBP6.63□□□□□ -1.35
CDK5RAP2-201ENST00000349780 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
CDK5RAP2-201ENST00000349780 DNAH14Q0VDD8 3507 aa6.61□□□□□ -1.35
CDK5RAP2-201ENST00000349780 M0R2T5 61 aa6.58□□□□□ -1.36
CDK5RAP2-201ENST00000349780 Q5VSD8 79 aa6.58□□□□□ -1.36
CDK5RAP2-201ENST00000349780 USP24Q9UPU5 2620 aa6.58□□□□□ -1.36
CDK5RAP2-201ENST00000349780 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CDK5RAP2-201ENST00000349780 MGAQ8IWI9 3026 aa6.57□□□□□ -1.36
CDK5RAP2-201ENST00000349780 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
CDK5RAP2-201ENST00000349780 NBEAQ8NFP9 2946 aa6.56□□□□□ -1.36
CDK5RAP2-201ENST00000349780 KRTAP21-3Q3LHN1 58 aa6.55□□□□□ -1.36
CDK5RAP2-201ENST00000349780 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
CDK5RAP2-201ENST00000349780 FRYQ5TBA9 3013 aa6.53□□□□□ -1.36
CDK5RAP2-201ENST00000349780 HTTP42858 3142 aa6.53□□□□□ -1.36
CDK5RAP2-201ENST00000349780 VPS13AQ96RL7 3174 aa6.52□□□□□ -1.37
CDK5RAP2-201ENST00000349780 P0C880 135 aa6.52□□□□□ -1.37
CDK5RAP2-201ENST00000349780 MAST4O15021 2626 aa6.51□□□□□ -1.37
CDK5RAP2-201ENST00000349780 CELSR3Q9NYQ7 3312 aa6.5□□□□□ -1.37
CDK5RAP2-201ENST00000349780 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
CDK5RAP2-201ENST00000349780 ATRQ13535 2644 aa6.49□□□□□ -1.37
CDK5RAP2-201ENST00000349780 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
CDK5RAP2-201ENST00000349780 KALRNO60229 2985 aa6.48□□□□□ -1.37
CDK5RAP2-201ENST00000349780 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
CDK5RAP2-201ENST00000349780 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.38
CDK5RAP2-201ENST00000349780 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
CDK5RAP2-201ENST00000349780 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
CDK5RAP2-201ENST00000349780 BRCA2P51587 3418 aa6.43□□□□□ -1.38
CDK5RAP2-201ENST00000349780 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
CDK5RAP2-201ENST00000349780 ITPR1Q14643 2758 aa6.42□□□□□ -1.38
CDK5RAP2-201ENST00000349780 NBEAL2Q6ZNJ1 2754 aa6.42□□□□□ -1.38
CDK5RAP2-201ENST00000349780 DSPP15924 2871 aaKnown RBP6.42□□□□□ -1.38
CDK5RAP2-201ENST00000349780 UNC80Q8N2C7 3258 aa6.41□□□□□ -1.38
CDK5RAP2-201ENST00000349780 TRANK1O15050 2925 aa6.41□□□□□ -1.38
CDK5RAP2-201ENST00000349780 REV3LO60673 3130 aa6.41□□□□□ -1.38
CDK5RAP2-201ENST00000349780 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
CDK5RAP2-201ENST00000349780 AKAP13Q12802 2813 aa6.4□□□□□ -1.38
CDK5RAP2-201ENST00000349780 CENPEQ02224 2701 aa6.4□□□□□ -1.39
CDK5RAP2-201ENST00000349780 XIRP2A4UGR9 3374 aa6.38□□□□□ -1.39
CDK5RAP2-201ENST00000349780 ZZEF1O43149 2961 aa6.37□□□□□ -1.39
CDK5RAP2-201ENST00000349780 ZNF292O60281 2723 aa6.36□□□□□ -1.39
CDK5RAP2-201ENST00000349780 VCANP13611 3396 aa6.34□□□□□ -1.39
CDK5RAP2-201ENST00000349780 RPS29P62273 56 aaKnown RBP6.33□□□□□ -1.4
CDK5RAP2-201ENST00000349780 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CDK5RAP2-201ENST00000349780 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
CDK5RAP2-201ENST00000349780 LAMA3Q16787 3333 aa6.32□□□□□ -1.4
CDK5RAP2-201ENST00000349780 TEP1Q99973 2627 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP2-201ENST00000349780 SETXQ7Z333 2677 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP2-201ENST00000349780 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
CDK5RAP2-201ENST00000349780 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP2-201ENST00000349780 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
CDK5RAP2-201ENST00000349780 NBEAL1Q6ZS30 2694 aa6.29□□□□□ -1.4
CDK5RAP2-201ENST00000349780 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
CDK5RAP2-201ENST00000349780 SZT2Q5T011 3432 aa6.28□□□□□ -1.4
CDK5RAP2-201ENST00000349780 LAMA1P25391 3075 aa6.27□□□□□ -1.41
CDK5RAP2-201ENST00000349780 STAB1Q9NY15 2570 aa6.26□□□□□ -1.41
CDK5RAP2-201ENST00000349780 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
CDK5RAP2-201ENST00000349780 CDH23Q9H251 3354 aa6.26□□□□□ -1.41
CDK5RAP2-201ENST00000349780 MAP1AP78559 2803 aaPredicted RBP6.25□□□□□ -1.41
CDK5RAP2-201ENST00000349780 PRUNE2Q8WUY3 3088 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms