RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
SMARCC2-202ENST00000347471 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
SMARCC2-202ENST00000347471 VPS13DQ5THJ4 4388 aa10.61□□□□□ -0.71
SMARCC2-202ENST00000347471 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
SMARCC2-202ENST00000347471 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
SMARCC2-202ENST00000347471 Q8NBF4 154 aa10.6□□□□□ -0.71
SMARCC2-202ENST00000347471 ATOX1O00244 68 aa10.6□□□□□ -0.71
SMARCC2-202ENST00000347471 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
SMARCC2-202ENST00000347471 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
SMARCC2-202ENST00000347471 SS18L2Q9UHA2 77 aa10.57□□□□□ -0.72
SMARCC2-202ENST00000347471 KRTAP21-3Q3LHN1 58 aa10.53□□□□□ -0.72
SMARCC2-202ENST00000347471 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
SMARCC2-202ENST00000347471 CIRBP-AS1Q8TBR5 109 aa10.53□□□□□ -0.72
SMARCC2-202ENST00000347471 CXCL6P80162 114 aa10.51□□□□□ -0.73
SMARCC2-202ENST00000347471 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-202ENST00000347471 MOBPQ13875 183 aa10.5□□□□□ -0.73
SMARCC2-202ENST00000347471 COX7CP15954 63 aa10.49□□□□□ -0.73
SMARCC2-202ENST00000347471 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
SMARCC2-202ENST00000347471 PLAC8Q9NZF1 115 aa10.49□□□□□ -0.73
SMARCC2-202ENST00000347471 KRTAP10-1P60331 282 aa10.48□□□□□ -0.73
SMARCC2-202ENST00000347471 UQCRQO14949 82 aa10.48□□□□□ -0.73
SMARCC2-202ENST00000347471 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
SMARCC2-202ENST00000347471 CRYGAP11844 174 aa10.46□□□□□ -0.74
SMARCC2-202ENST00000347471 WFDC13Q8IUB5 93 aa10.46□□□□□ -0.74
SMARCC2-202ENST00000347471 H0Y9J4 135 aa10.45□□□□□ -0.74
SMARCC2-202ENST00000347471 ZNF861PO60384 105 aa10.45□□□□□ -0.74
SMARCC2-202ENST00000347471 SPRR4Q96PI1 79 aa10.45□□□□□ -0.74
SMARCC2-202ENST00000347471 K7EQZ3 153 aa10.45□□□□□ -0.74
SMARCC2-202ENST00000347471 SNURFQ9Y675 71 aa10.44□□□□□ -0.74
SMARCC2-202ENST00000347471 IGKV4-1P06312 121 aa10.43□□□□□ -0.74
SMARCC2-202ENST00000347471 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
SMARCC2-202ENST00000347471 HYDINQ4G0P3 5121 aa10.41□□□□□ -0.74
SMARCC2-202ENST00000347471 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
SMARCC2-202ENST00000347471 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.74
SMARCC2-202ENST00000347471 CYSTM1Q9H1C7 97 aa10.4□□□□□ -0.75
SMARCC2-202ENST00000347471 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.75
SMARCC2-202ENST00000347471 DNAH11Q96DT5 4516 aa10.4□□□□□ -0.75
SMARCC2-202ENST00000347471 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
SMARCC2-202ENST00000347471 DSCR10P59022 87 aa10.38□□□□□ -0.75
SMARCC2-202ENST00000347471 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
SMARCC2-202ENST00000347471 SPRR1BP22528 89 aa10.36□□□□□ -0.75
SMARCC2-202ENST00000347471 FRAS1Q86XX4 4008 aa10.33□□□□□ -0.76
SMARCC2-202ENST00000347471 HECTD4Q9Y4D8 3996 aa10.33□□□□□ -0.76
SMARCC2-202ENST00000347471 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
SMARCC2-202ENST00000347471 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
SMARCC2-202ENST00000347471 TRAV7A0A075B6U4 112 aa10.32□□□□□ -0.76
SMARCC2-202ENST00000347471 A0A1B0GW54 56 aa10.3□□□□□ -0.76
SMARCC2-202ENST00000347471 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
SMARCC2-202ENST00000347471 HCG22E2RYF7 251 aa10.27□□□□□ -0.76
SMARCC2-202ENST00000347471 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
SMARCC2-202ENST00000347471 NDUFB1O75438 58 aa10.25□□□□□ -0.77
SMARCC2-202ENST00000347471 LCE6AA0A183 80 aa10.25□□□□□ -0.77
SMARCC2-202ENST00000347471 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
SMARCC2-202ENST00000347471 DNAH8Q96JB1 4490 aa10.24□□□□□ -0.77
SMARCC2-202ENST00000347471 NDUFS5O43920 106 aa10.23□□□□□ -0.77
SMARCC2-202ENST00000347471 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
SMARCC2-202ENST00000347471 A0A087X002 238 aa10.22□□□□□ -0.77
SMARCC2-202ENST00000347471 LINC00483Q53H64 154 aa10.22□□□□□ -0.77
SMARCC2-202ENST00000347471 CASC2Q6XLA1 102 aa10.22□□□□□ -0.77
SMARCC2-202ENST00000347471 TMEM254Q8TBM7 123 aa10.21□□□□□ -0.77
SMARCC2-202ENST00000347471 LINC00472Q9H8W2 130 aa10.2□□□□□ -0.78
SMARCC2-202ENST00000347471 LRP1BQ9NZR2 4599 aa10.19□□□□□ -0.78
SMARCC2-202ENST00000347471 A8MWP4 228 aa10.18□□□□□ -0.78
SMARCC2-202ENST00000347471 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
SMARCC2-202ENST00000347471 Q6ZSA8 131 aa10.18□□□□□ -0.78
SMARCC2-202ENST00000347471 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
SMARCC2-202ENST00000347471 PLA2G1BP04054 148 aaKnown RBP10.17□□□□□ -0.78
SMARCC2-202ENST00000347471 PRR4Q16378 134 aa10.15□□□□□ -0.79
SMARCC2-202ENST00000347471 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
SMARCC2-202ENST00000347471 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
SMARCC2-202ENST00000347471 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
SMARCC2-202ENST00000347471 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
SMARCC2-202ENST00000347471 LINC00336Q6ZUF6 198 aa10.11□□□□□ -0.79
SMARCC2-202ENST00000347471 hDV103S1A0JD37 113 aa10.1□□□□□ -0.79
SMARCC2-202ENST00000347471 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
SMARCC2-202ENST00000347471 TMEM258P61165 79 aa10.09□□□□□ -0.79
SMARCC2-202ENST00000347471 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
SMARCC2-202ENST00000347471 J3KT08 172 aa10.09□□□□□ -0.79
SMARCC2-202ENST00000347471 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
SMARCC2-202ENST00000347471 H7BZZ5 65 aa10.08□□□□□ -0.8
SMARCC2-202ENST00000347471 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
SMARCC2-202ENST00000347471 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
SMARCC2-202ENST00000347471 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
SMARCC2-202ENST00000347471 MP68P56378 58 aa10.07□□□□□ -0.8
SMARCC2-202ENST00000347471 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
SMARCC2-202ENST00000347471 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
SMARCC2-202ENST00000347471 Q96NJ1 140 aa10.07□□□□□ -0.8
SMARCC2-202ENST00000347471 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
SMARCC2-202ENST00000347471 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
SMARCC2-202ENST00000347471 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-202ENST00000347471 RETNLBQ9BQ08 111 aa10.04□□□□□ -0.8
SMARCC2-202ENST00000347471 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-202ENST00000347471 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
SMARCC2-202ENST00000347471 MMP24-AS1A0A0U1RRL7 71 aa10.03□□□□□ -0.8
SMARCC2-202ENST00000347471 A0A1B0GVX0 72 aa10.02□□□□□ -0.8
SMARCC2-202ENST00000347471 H0Y9P7 68 aa10.02□□□□□ -0.8
SMARCC2-202ENST00000347471 FAT1Q14517 4588 aa10.02□□□□□ -0.81
SMARCC2-202ENST00000347471 A0A0U1RQV1 116 aa10□□□□□ -0.81
SMARCC2-202ENST00000347471 PKD1P98161 4303 aa9.99□□□□□ -0.81
SMARCC2-202ENST00000347471 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms