RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
PDE4D-203ENST00000340635 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
PDE4D-203ENST00000340635 PRUNE2Q8WUY3 3088 aa8.67□□□□□ -1.02
PDE4D-203ENST00000340635 M0QZ58 72 aa8.67□□□□□ -1.02
PDE4D-203ENST00000340635 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
PDE4D-203ENST00000340635 ITPR3Q14573 2671 aa8.66□□□□□ -1.02
PDE4D-203ENST00000340635 TNP2Q05952 138 aa8.65□□□□□ -1.02
PDE4D-203ENST00000340635 FLNAP21333 2647 aaKnown RBP8.65□□□□□ -1.02
PDE4D-203ENST00000340635 Q5VV11 94 aa8.65□□□□□ -1.03
PDE4D-203ENST00000340635 MGAM2Q2M2H8 2515 aa8.64□□□□□ -1.03
PDE4D-203ENST00000340635 MAST4O15021 2626 aa8.64□□□□□ -1.03
PDE4D-203ENST00000340635 VPS13AQ96RL7 3174 aa8.64□□□□□ -1.03
PDE4D-203ENST00000340635 BRCA2P51587 3418 aa8.64□□□□□ -1.03
PDE4D-203ENST00000340635 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-203ENST00000340635 TRIOO75962 3097 aa8.61□□□□□ -1.03
PDE4D-203ENST00000340635 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
PDE4D-203ENST00000340635 CHD6Q8TD26 2715 aa8.6□□□□□ -1.03
PDE4D-203ENST00000340635 Q5W150 140 aa8.59□□□□□ -1.03
PDE4D-203ENST00000340635 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
PDE4D-203ENST00000340635 KRTAP10-3P60369 221 aa8.59□□□□□ -1.03
PDE4D-203ENST00000340635 ATRQ13535 2644 aa8.58□□□□□ -1.04
PDE4D-203ENST00000340635 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
PDE4D-203ENST00000340635 TEX15Q9BXT5 2789 aa8.55□□□□□ -1.04
PDE4D-203ENST00000340635 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
PDE4D-203ENST00000340635 HELZ2Q9BYK8 2649 aaKnown RBP8.55□□□□□ -1.04
PDE4D-203ENST00000340635 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
PDE4D-203ENST00000340635 KMT2BQ9UMN6 2715 aaPredicted RBP8.53□□□□□ -1.04
PDE4D-203ENST00000340635 LAMA3Q16787 3333 aa8.52□□□□□ -1.05
PDE4D-203ENST00000340635 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
PDE4D-203ENST00000340635 ADM2Q7Z4H4 148 aa8.51□□□□□ -1.05
PDE4D-203ENST00000340635 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
PDE4D-203ENST00000340635 Q5VSD8 79 aa8.5□□□□□ -1.05
PDE4D-203ENST00000340635 CDH23Q9H251 3354 aa8.46□□□□□ -1.05
PDE4D-203ENST00000340635 CHD7Q9P2D1 2997 aa8.46□□□□□ -1.05
PDE4D-203ENST00000340635 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
PDE4D-203ENST00000340635 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
PDE4D-203ENST00000340635 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-203ENST00000340635 MGAQ8IWI9 3026 aa8.44□□□□□ -1.06
PDE4D-203ENST00000340635 A0A096LNT2 108 aa8.43□□□□□ -1.06
PDE4D-203ENST00000340635 CYSTM1Q9H1C7 97 aa8.42□□□□□ -1.06
PDE4D-203ENST00000340635 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
PDE4D-203ENST00000340635 WDFY4Q6ZS81 3184 aa8.41□□□□□ -1.06
PDE4D-203ENST00000340635 UNC80Q8N2C7 3258 aa8.41□□□□□ -1.06
PDE4D-203ENST00000340635 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-203ENST00000340635 Q8NDZ9 215 aa8.39□□□□□ -1.07
PDE4D-203ENST00000340635 COL6A5A8TX70 2615 aa8.39□□□□□ -1.07
PDE4D-203ENST00000340635 STAB1Q9NY15 2570 aa8.38□□□□□ -1.07
PDE4D-203ENST00000340635 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
PDE4D-203ENST00000340635 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
PDE4D-203ENST00000340635 FRYQ5TBA9 3013 aa8.36□□□□□ -1.07
PDE4D-203ENST00000340635 LAMA1P25391 3075 aa8.36□□□□□ -1.07
PDE4D-203ENST00000340635 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
PDE4D-203ENST00000340635 SPRR1AP35321 89 aa8.32□□□□□ -1.08
PDE4D-203ENST00000340635 USP34Q70CQ2 3546 aa8.32□□□□□ -1.08
PDE4D-203ENST00000340635 OXTP01178 125 aa8.29□□□□□ -1.08
PDE4D-203ENST00000340635 SPRR1BP22528 89 aa8.29□□□□□ -1.08
PDE4D-203ENST00000340635 PANO1I0J062 215 aa8.28□□□□□ -1.08
PDE4D-203ENST00000340635 TRANK1O15050 2925 aa8.27□□□□□ -1.09
PDE4D-203ENST00000340635 SZT2Q5T011 3432 aa8.26□□□□□ -1.09
PDE4D-203ENST00000340635 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
PDE4D-203ENST00000340635 SPEGQ15772 3267 aa8.25□□□□□ -1.09
PDE4D-203ENST00000340635 Q6ZR54 194 aa8.24□□□□□ -1.09
PDE4D-203ENST00000340635 ASH1LQ9NR48 2969 aaKnown RBP8.24□□□□□ -1.09
PDE4D-203ENST00000340635 DSPP15924 2871 aaKnown RBP8.24□□□□□ -1.09
PDE4D-203ENST00000340635 GCN1Q92616 2671 aaKnown RBP8.23□□□□□ -1.09
PDE4D-203ENST00000340635 HTTP42858 3142 aa8.23□□□□□ -1.09
PDE4D-203ENST00000340635 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
PDE4D-203ENST00000340635 FRYLO94915 3013 aa8.21□□□□□ -1.09
PDE4D-203ENST00000340635 APCP25054 2843 aa8.21□□□□□ -1.1
PDE4D-203ENST00000340635 KALRNO60229 2985 aa8.21□□□□□ -1.1
PDE4D-203ENST00000340635 COL6A3P12111 3177 aa8.21□□□□□ -1.1
PDE4D-203ENST00000340635 NDUFAF8A1L188 74 aa8.2□□□□□ -1.1
PDE4D-203ENST00000340635 VCANP13611 3396 aa8.19□□□□□ -1.1
PDE4D-203ENST00000340635 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
PDE4D-203ENST00000340635 A8MUU9 505 aa8.19□□□□□ -1.1
PDE4D-203ENST00000340635 LRBAP50851 2863 aa8.17□□□□□ -1.1
PDE4D-203ENST00000340635 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
PDE4D-203ENST00000340635 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
PDE4D-203ENST00000340635 BOD1L1Q8NFC6 3051 aa8.16□□□□□ -1.1
PDE4D-203ENST00000340635 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
PDE4D-203ENST00000340635 KRTAP1-3Q8IUG1 177 aa8.13□□□□□ -1.11
PDE4D-203ENST00000340635 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
PDE4D-203ENST00000340635 A6NN06 94 aa8.11□□□□□ -1.11
PDE4D-203ENST00000340635 CRYBG3Q68DQ2 2970 aa8.1□□□□□ -1.11
PDE4D-203ENST00000340635 TNP1P09430 55 aa8.1□□□□□ -1.11
PDE4D-203ENST00000340635 ZNF292O60281 2723 aa8.1□□□□□ -1.11
PDE4D-203ENST00000340635 KRTAP1-1Q07627 177 aa8.09□□□□□ -1.11
PDE4D-203ENST00000340635 A8MU10 97 aa8.07□□□□□ -1.12
PDE4D-203ENST00000340635 WDFY3Q8IZQ1 3526 aa8.07□□□□□ -1.12
PDE4D-203ENST00000340635 SETXQ7Z333 2677 aaKnown RBP8.06□□□□□ -1.12
PDE4D-203ENST00000340635 LCE6AA0A183 80 aa8.06□□□□□ -1.12
PDE4D-203ENST00000340635 KRTAP10-2P60368 255 aa8.06□□□□□ -1.12
PDE4D-203ENST00000340635 CFAP47Q6ZTR5 3102 aa8.05□□□□□ -1.12
PDE4D-203ENST00000340635 KRTAP29-1A8MX34 341 aaPredicted RBP8.03□□□□□ -1.12
PDE4D-203ENST00000340635 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
PDE4D-203ENST00000340635 BAHCC1Q9P281 2608 aa8□□□□□ -1.13
PDE4D-203ENST00000340635 KRTAP1-5Q9BYS1 174 aa8□□□□□ -1.13
PDE4D-203ENST00000340635 SPTBN5Q9NRC6 3674 aaKnown RBP7.99□□□□□ -1.13
PDE4D-203ENST00000340635 COL12A1Q99715 3063 aa7.99□□□□□ -1.13
PDE4D-203ENST00000340635 DMXL2Q8TDJ6 3036 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms