RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LOC110117498A0A087WWA1 95 aa13.63□□□□□ -0.23
IRF3-201ENST00000309877 PDE6GP18545 87 aa13.63□□□□□ -0.23
IRF3-201ENST00000309877 TRBV7-4A0A0J9YYF1 115 aa13.62□□□□□ -0.23
IRF3-201ENST00000309877 CCKP06307 115 aa13.62□□□□□ -0.23
IRF3-201ENST00000309877 Q6ZQT0 140 aa13.61□□□□□ -0.23
IRF3-201ENST00000309877 LINC00483Q53H64 154 aa13.6□□□□□ -0.23
IRF3-201ENST00000309877 APOBP04114 4563 aaKnown RBP13.58□□□□□ -0.24
IRF3-201ENST00000309877 SRRM2Q9UQ35 2752 aaKnown RBP13.58□□□□□ -0.24
IRF3-201ENST00000309877 FAM240AA0A1B0GVK7 77 aa13.56□□□□□ -0.24
IRF3-201ENST00000309877 ACYP1P07311 99 aa13.56□□□□□ -0.24
IRF3-201ENST00000309877 VPS25Q9BRG1 176 aa13.56□□□□□ -0.24
IRF3-201ENST00000309877 C21orf62-AS1Q17RA5 79 aa13.54□□□□□ -0.24
IRF3-201ENST00000309877 ANAPC11Q9NYG5 84 aa13.54□□□□□ -0.24
IRF3-201ENST00000309877 IGLV8-61A0A075B6I0 122 aa13.53□□□□□ -0.24
IRF3-201ENST00000309877 CDK2AP2O75956 126 aa13.53□□□□□ -0.24
IRF3-201ENST00000309877 IGLV9-49A0A0B4J1Y8 123 aa13.51□□□□□ -0.25
IRF3-201ENST00000309877 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
IRF3-201ENST00000309877 Q6JHZ5 121 aa13.49□□□□□ -0.25
IRF3-201ENST00000309877 IGFL1Q6UW32 110 aa13.49□□□□□ -0.25
IRF3-201ENST00000309877 SPINK6Q6UWN8 80 aa13.49□□□□□ -0.25
IRF3-201ENST00000309877 VPS13BQ7Z7G8 4022 aa13.47□□□□□ -0.25
IRF3-201ENST00000309877 FAM229AH3BQW9 127 aa13.46□□□□□ -0.26
IRF3-201ENST00000309877 CDIP1Q9H305 208 aa13.46□□□□□ -0.26
IRF3-201ENST00000309877 A0A0G2JQZ4 141 aa13.44□□□□□ -0.26
IRF3-201ENST00000309877 A0A1W2PNM2 257 aa13.44□□□□□ -0.26
IRF3-201ENST00000309877 Q8NBF4 154 aa13.44□□□□□ -0.26
IRF3-201ENST00000309877 LINC00846Q9NV44 126 aa13.44□□□□□ -0.26
IRF3-201ENST00000309877 PLA2G1BP04054 148 aaKnown RBP13.43□□□□□ -0.26
IRF3-201ENST00000309877 KRTAP10-4P60372 401 aaPredicted RBP13.43□□□□□ -0.26
IRF3-201ENST00000309877 MOBPQ13875 183 aa13.43□□□□□ -0.26
IRF3-201ENST00000309877 FAM229BQ4G0N7 80 aa13.4□□□□□ -0.26
IRF3-201ENST00000309877 A0A1B0GW54 56 aa13.38□□□□□ -0.27
IRF3-201ENST00000309877 KRTAP1-4P0C5Y4 121 aa13.38□□□□□ -0.27
IRF3-201ENST00000309877 FAT1Q14517 4588 aa13.37□□□□□ -0.27
IRF3-201ENST00000309877 UBL5Q9BZL1 73 aa13.37□□□□□ -0.27
IRF3-201ENST00000309877 CRYGAP11844 174 aa13.36□□□□□ -0.27
IRF3-201ENST00000309877 Q5VSD8 79 aa13.34□□□□□ -0.27
IRF3-201ENST00000309877 A0A087X002 238 aa13.34□□□□□ -0.27
IRF3-201ENST00000309877 SSBP3-AS1Q7Z2R9 100 aa13.33□□□□□ -0.28
IRF3-201ENST00000309877 Q6Q795 121 aa13.32□□□□□ -0.28
IRF3-201ENST00000309877 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
IRF3-201ENST00000309877 EPPK1P58107 5090 aaKnown RBP13.31□□□□□ -0.28
IRF3-201ENST00000309877 KRTAP13-2Q52LG2 175 aa13.3□□□□□ -0.28
IRF3-201ENST00000309877 Q6ZVQ6 151 aa13.29□□□□□ -0.28
IRF3-201ENST00000309877 HSPG2P98160 4391 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 NREPQ16612 68 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 RYR1P21817 5038 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 A0A087WSZ3 146 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 HRCT1Q6UXD1 115 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 SIGMAR1Q99720 223 aa13.28□□□□□ -0.28
IRF3-201ENST00000309877 MT-ATP8P03928 68 aa13.25□□□□□ -0.29
IRF3-201ENST00000309877 TRBV7-7A0A0K0K1E9 115 aa13.24□□□□□ -0.29
IRF3-201ENST00000309877 Q8N1X5 172 aa13.22□□□□□ -0.29
IRF3-201ENST00000309877 TYMSOSQ8TAI1 123 aa13.22□□□□□ -0.29
IRF3-201ENST00000309877 PRR26Q8N8Z3 221 aa13.21□□□□□ -0.3
IRF3-201ENST00000309877 IGKV3D-7A0A0C4DH55 119 aa13.2□□□□□ -0.3
IRF3-201ENST00000309877 CD164Q04900 197 aa13.2□□□□□ -0.3
IRF3-201ENST00000309877 KIAA1109Q2LD37 5005 aa13.19□□□□□ -0.3
IRF3-201ENST00000309877 ATP5EP2Q5VTU8 51 aa13.18□□□□□ -0.3
IRF3-201ENST00000309877 KRTAP17-1Q9BYP8 105 aa13.17□□□□□ -0.3
IRF3-201ENST00000309877 SS18L2Q9UHA2 77 aa13.15□□□□□ -0.3
IRF3-201ENST00000309877 BPY2O14599 106 aa13.13□□□□□ -0.31
IRF3-201ENST00000309877 CXCL6P80162 114 aa13.12□□□□□ -0.31
IRF3-201ENST00000309877 C4orf48Q5BLP8 95 aa13.12□□□□□ -0.31
IRF3-201ENST00000309877 IMUPQ9GZP8 106 aa13.08□□□□□ -0.31
IRF3-201ENST00000309877 PKHD1L1Q86WI1 4243 aa13.08□□□□□ -0.32
IRF3-201ENST00000309877 DEFB116Q30KQ4 102 aa13.07□□□□□ -0.32
IRF3-201ENST00000309877 LINC00304Q8N9R0 145 aa13.06□□□□□ -0.32
IRF3-201ENST00000309877 HIST1H4AP62805 103 aaKnown RBP13.05□□□□□ -0.32
IRF3-201ENST00000309877 LINC00472Q9H8W2 130 aa13.05□□□□□ -0.32
IRF3-201ENST00000309877 SPINK1P00995 79 aa13.02□□□□□ -0.32
IRF3-201ENST00000309877 SPAG11AQ6PDA7 123 aa13.02□□□□□ -0.32
IRF3-201ENST00000309877 LIMD2Q9BT23 127 aa13.02□□□□□ -0.33
IRF3-201ENST00000309877 J3KT08 172 aa12.99□□□□□ -0.33
IRF3-201ENST00000309877 Q5XG85 94 aa12.99□□□□□ -0.33
IRF3-201ENST00000309877 Q96NJ1 140 aa12.99□□□□□ -0.33
IRF3-201ENST00000309877 DSCR10P59022 87 aa12.99□□□□□ -0.33
IRF3-201ENST00000309877 Q8N9L7 120 aa12.99□□□□□ -0.33
IRF3-201ENST00000309877 ASB16-AS1Q495Z4 193 aa12.98□□□□□ -0.33
IRF3-201ENST00000309877 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
IRF3-201ENST00000309877 A0A087WVE0 104 aa12.96□□□□□ -0.34
IRF3-201ENST00000309877 RPS29P62273 56 aaKnown RBP12.93□□□□□ -0.34
IRF3-201ENST00000309877 K7EQZ3 153 aa12.93□□□□□ -0.34
IRF3-201ENST00000309877 KRTAP10-8P60410 259 aa12.93□□□□□ -0.34
IRF3-201ENST00000309877 A8MWP4 228 aa12.91□□□□□ -0.34
IRF3-201ENST00000309877 SCGB1A1P11684 91 aa12.91□□□□□ -0.34
IRF3-201ENST00000309877 BIRC6Q9NR09 4857 aa12.9□□□□□ -0.34
IRF3-201ENST00000309877 NDUFB1O75438 58 aa12.89□□□□□ -0.35
IRF3-201ENST00000309877 KRTAP4-5Q9BYR2 181 aa12.89□□□□□ -0.35
IRF3-201ENST00000309877 C1orf195Q5TG92 126 aa12.88□□□□□ -0.35
IRF3-201ENST00000309877 FAM236AA0A1B0GUQ0 79 aa12.87□□□□□ -0.35
IRF3-201ENST00000309877 FAM236BA0A1B0GV22 79 aa12.87□□□□□ -0.35
IRF3-201ENST00000309877 PRR15Q8IV56 129 aa12.86□□□□□ -0.35
IRF3-201ENST00000309877 LRP1Q07954 4544 aaKnown RBP12.84□□□□□ -0.35
IRF3-201ENST00000309877 OXTP01178 125 aa12.81□□□□□ -0.36
IRF3-201ENST00000309877 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
IRF3-201ENST00000309877 FLG2Q5D862 2391 aaPredicted RBP12.8□□□□□ -0.36
IRF3-201ENST00000309877 A0A1B0GVX0 72 aa12.8□□□□□ -0.36
IRF3-201ENST00000309877 IGHV6-1A0A0B4J1U7 121 aa12.79□□□□□ -0.36
IRF3-201ENST00000309877 HCG22E2RYF7 251 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms