RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SPEGQ15772 3267 aa7.85□□□□□ -1.15
USP38-201ENST00000307017 SPANXA2-OT1Q8N9U9 137 aa7.85□□□□□ -1.15
USP38-201ENST00000307017 MTORP42345 2549 aa7.84□□□□□ -1.15
USP38-201ENST00000307017 S4R3F8 94 aa7.83□□□□□ -1.16
USP38-201ENST00000307017 Q5VV11 94 aa7.82□□□□□ -1.16
USP38-201ENST00000307017 OXTP01178 125 aa7.81□□□□□ -1.16
USP38-201ENST00000307017 Q75L30 129 aa7.8□□□□□ -1.16
USP38-201ENST00000307017 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
USP38-201ENST00000307017 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
USP38-201ENST00000307017 CHD7Q9P2D1 2997 aa7.79□□□□□ -1.16
USP38-201ENST00000307017 USP9YO00507 2555 aaPredicted RBP7.78□□□□□ -1.16
USP38-201ENST00000307017 R4GN34 69 aa7.76□□□□□ -1.17
USP38-201ENST00000307017 CFAP47Q6ZTR5 3102 aa7.76□□□□□ -1.17
USP38-201ENST00000307017 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
USP38-201ENST00000307017 KRTAP1-3Q8IUG1 177 aa7.74□□□□□ -1.17
USP38-201ENST00000307017 Q5W150 140 aa7.74□□□□□ -1.17
USP38-201ENST00000307017 USP24Q9UPU5 2620 aa7.74□□□□□ -1.17
USP38-201ENST00000307017 WDFY3Q8IZQ1 3526 aa7.73□□□□□ -1.17
USP38-201ENST00000307017 KLK9Q2XQG4 91 aa7.72□□□□□ -1.17
USP38-201ENST00000307017 CEP295Q9C0D2 2601 aa7.7□□□□□ -1.18
USP38-201ENST00000307017 WDFY4Q6ZS81 3184 aa7.69□□□□□ -1.18
USP38-201ENST00000307017 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
USP38-201ENST00000307017 PIEZO1Q92508 2521 aa7.69□□□□□ -1.18
USP38-201ENST00000307017 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
USP38-201ENST00000307017 KRTAP1-1Q07627 177 aa7.66□□□□□ -1.18
USP38-201ENST00000307017 FASNP49327 2511 aaKnown RBP7.65□□□□□ -1.18
USP38-201ENST00000307017 DCHS1Q96JQ0 3298 aa7.65□□□□□ -1.18
USP38-201ENST00000307017 LAMA1P25391 3075 aa7.65□□□□□ -1.18
USP38-201ENST00000307017 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.19
USP38-201ENST00000307017 HTTP42858 3142 aa7.64□□□□□ -1.19
USP38-201ENST00000307017 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
USP38-201ENST00000307017 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
USP38-201ENST00000307017 M0QZ58 72 aa7.62□□□□□ -1.19
USP38-201ENST00000307017 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
USP38-201ENST00000307017 KRTAP1-5Q9BYS1 174 aa7.59□□□□□ -1.19
USP38-201ENST00000307017 MGAQ8IWI9 3026 aa7.59□□□□□ -1.19
USP38-201ENST00000307017 A8MU10 97 aa7.58□□□□□ -1.2
USP38-201ENST00000307017 ROMO1P60602 79 aa7.58□□□□□ -1.2
USP38-201ENST00000307017 KRTAP26-1Q6PEX3 210 aa7.57□□□□□ -1.2
USP38-201ENST00000307017 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
USP38-201ENST00000307017 FRYQ5TBA9 3013 aa7.56□□□□□ -1.2
USP38-201ENST00000307017 ASPMQ8IZT6 3477 aa7.56□□□□□ -1.2
USP38-201ENST00000307017 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
USP38-201ENST00000307017 PANO1I0J062 215 aa7.54□□□□□ -1.2
USP38-201ENST00000307017 A0A087X002 238 aa7.54□□□□□ -1.2
USP38-201ENST00000307017 NOTCH2NLQ7Z3S9 236 aa7.54□□□□□ -1.2
USP38-201ENST00000307017 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
USP38-201ENST00000307017 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
USP38-201ENST00000307017 KALRNO60229 2985 aa7.5□□□□□ -1.21
USP38-201ENST00000307017 KRTAP10-1P60331 282 aa7.5□□□□□ -1.21
USP38-201ENST00000307017 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
USP38-201ENST00000307017 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
USP38-201ENST00000307017 FRYLO94915 3013 aa7.48□□□□□ -1.21
USP38-201ENST00000307017 Q6ZR54 194 aa7.45□□□□□ -1.22
USP38-201ENST00000307017 P0C880 135 aa7.44□□□□□ -1.22
USP38-201ENST00000307017 AKAP13Q12802 2813 aa7.44□□□□□ -1.22
USP38-201ENST00000307017 MGAM2Q2M2H8 2515 aa7.43□□□□□ -1.22
USP38-201ENST00000307017 SPRR1AP35321 89 aa7.41□□□□□ -1.22
USP38-201ENST00000307017 TRANK1O15050 2925 aa7.41□□□□□ -1.22
USP38-201ENST00000307017 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
USP38-201ENST00000307017 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
USP38-201ENST00000307017 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
USP38-201ENST00000307017 HECTD1Q9ULT8 2610 aa7.38□□□□□ -1.23
USP38-201ENST00000307017 BOD1L1Q8NFC6 3051 aa7.37□□□□□ -1.23
USP38-201ENST00000307017 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
USP38-201ENST00000307017 LOC400499M0QZD8 3231 aa7.37□□□□□ -1.23
USP38-201ENST00000307017 CSMD1Q96PZ7 3565 aa7.37□□□□□ -1.23
USP38-201ENST00000307017 LRBAP50851 2863 aa7.36□□□□□ -1.23
USP38-201ENST00000307017 FLNAP21333 2647 aaKnown RBP7.36□□□□□ -1.23
USP38-201ENST00000307017 DSPP15924 2871 aaKnown RBP7.35□□□□□ -1.23
USP38-201ENST00000307017 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
USP38-201ENST00000307017 LAMA5O15230 3695 aa7.34□□□□□ -1.23
USP38-201ENST00000307017 ZFHX4Q86UP3 3567 aa7.34□□□□□ -1.23
USP38-201ENST00000307017 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
USP38-201ENST00000307017 EPG5Q9HCE0 2579 aa7.3□□□□□ -1.24
USP38-201ENST00000307017 ATMQ13315 3056 aa7.29□□□□□ -1.24
USP38-201ENST00000307017 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
USP38-201ENST00000307017 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
USP38-201ENST00000307017 DMXL2Q8TDJ6 3036 aa7.28□□□□□ -1.24
USP38-201ENST00000307017 CHD9Q3L8U1 2897 aa7.28□□□□□ -1.24
USP38-201ENST00000307017 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
USP38-201ENST00000307017 CRYBG3Q68DQ2 2970 aa7.26□□□□□ -1.25
USP38-201ENST00000307017 ATRQ13535 2644 aa7.25□□□□□ -1.25
USP38-201ENST00000307017 NBEAL2Q6ZNJ1 2754 aa7.24□□□□□ -1.25
USP38-201ENST00000307017 A6NN06 94 aa7.23□□□□□ -1.25
USP38-201ENST00000307017 MAP1AP78559 2803 aaPredicted RBP7.23□□□□□ -1.25
USP38-201ENST00000307017 ADGRG4Q8IZF6 3080 aa7.23□□□□□ -1.25
USP38-201ENST00000307017 CFAP46Q8IYW2 2715 aa7.22□□□□□ -1.25
USP38-201ENST00000307017 A8MUU9 505 aa7.22□□□□□ -1.25
USP38-201ENST00000307017 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.25
USP38-201ENST00000307017 SPRR1BP22528 89 aa7.21□□□□□ -1.25
USP38-201ENST00000307017 NBEAQ8NFP9 2946 aa7.19□□□□□ -1.26
USP38-201ENST00000307017 RELNP78509 3460 aa7.19□□□□□ -1.26
USP38-201ENST00000307017 KRTAP4-16G5E9R7 235 aaPredicted RBP7.18□□□□□ -1.26
USP38-201ENST00000307017 TEX15Q9BXT5 2789 aa7.18□□□□□ -1.26
USP38-201ENST00000307017 CENPEQ02224 2701 aa7.16□□□□□ -1.26
USP38-201ENST00000307017 GCN1Q92616 2671 aaKnown RBP7.15□□□□□ -1.26
USP38-201ENST00000307017 A0A1B0GVY2 172 aa7.15□□□□□ -1.27
USP38-201ENST00000307017 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
USP38-201ENST00000307017 NBEAL1Q6ZS30 2694 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms