RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 CFAP46Q8IYW2 2715 aa12.88□□□□□ -0.35
LETM1-201ENST00000302787 A0A1B0GU33 70 aa12.84□□□□□ -0.35
LETM1-201ENST00000302787 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
LETM1-201ENST00000302787 MGAQ8IWI9 3026 aa12.81□□□□□ -0.36
LETM1-201ENST00000302787 ZCCHC13Q8WW36 166 aaKnown RBP12.81□□□□□ -0.36
LETM1-201ENST00000302787 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
LETM1-201ENST00000302787 Q5W150 140 aa12.78□□□□□ -0.36
LETM1-201ENST00000302787 Q6ZSA8 131 aa12.77□□□□□ -0.37
LETM1-201ENST00000302787 Q5VV11 94 aa12.74□□□□□ -0.37
LETM1-201ENST00000302787 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
LETM1-201ENST00000302787 CHD6Q8TD26 2715 aa12.71□□□□□ -0.37
LETM1-201ENST00000302787 OXTP01178 125 aa12.69□□□□□ -0.38
LETM1-201ENST00000302787 ZNF292O60281 2723 aa12.68□□□□□ -0.38
LETM1-201ENST00000302787 AKAP13Q12802 2813 aa12.68□□□□□ -0.38
LETM1-201ENST00000302787 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
LETM1-201ENST00000302787 SPINK7P58062 85 aa12.63□□□□□ -0.39
LETM1-201ENST00000302787 KRTAP4-16G5E9R7 235 aaPredicted RBP12.62□□□□□ -0.39
LETM1-201ENST00000302787 BRCA2P51587 3418 aa12.6□□□□□ -0.39
LETM1-201ENST00000302787 DMAC1Q96GE9 116 aa12.58□□□□□ -0.4
LETM1-201ENST00000302787 PRAC1Q96KF2 57 aa12.58□□□□□ -0.4
LETM1-201ENST00000302787 LINC00483Q53H64 154 aa12.58□□□□□ -0.4
LETM1-201ENST00000302787 GCN1Q92616 2671 aaKnown RBP12.57□□□□□ -0.4
LETM1-201ENST00000302787 S4R3F8 94 aa12.56□□□□□ -0.4
LETM1-201ENST00000302787 WDFY4Q6ZS81 3184 aa12.55□□□□□ -0.4
LETM1-201ENST00000302787 CAMK2N1Q7Z7J9 78 aa12.52□□□□□ -0.41
LETM1-201ENST00000302787 TEX15Q9BXT5 2789 aa12.52□□□□□ -0.41
LETM1-201ENST00000302787 CSAG1Q6PB30 78 aa12.51□□□□□ -0.41
LETM1-201ENST00000302787 PANO1I0J062 215 aa12.49□□□□□ -0.41
LETM1-201ENST00000302787 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
LETM1-201ENST00000302787 TRIOO75962 3097 aa12.49□□□□□ -0.41
LETM1-201ENST00000302787 KRTAP29-1A8MX34 341 aaPredicted RBP12.48□□□□□ -0.41
LETM1-201ENST00000302787 KRTAP10-2P60368 255 aa12.48□□□□□ -0.41
LETM1-201ENST00000302787 LUZP6Q538Z0 58 aa12.48□□□□□ -0.41
LETM1-201ENST00000302787 Q6ZR54 194 aa12.47□□□□□ -0.41
LETM1-201ENST00000302787 UNC79Q9P2D8 2635 aa12.46□□□□□ -0.41
LETM1-201ENST00000302787 UNC80Q8N2C7 3258 aa12.43□□□□□ -0.42
LETM1-201ENST00000302787 NBEAL1Q6ZS30 2694 aa12.42□□□□□ -0.42
LETM1-201ENST00000302787 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
LETM1-201ENST00000302787 STAB1Q9NY15 2570 aa12.39□□□□□ -0.43
LETM1-201ENST00000302787 TEP1Q99973 2627 aaKnown RBP12.38□□□□□ -0.43
LETM1-201ENST00000302787 DSPP15924 2871 aaKnown RBP12.36□□□□□ -0.43
LETM1-201ENST00000302787 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
LETM1-201ENST00000302787 FRYQ5TBA9 3013 aa12.34□□□□□ -0.43
LETM1-201ENST00000302787 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.44
LETM1-201ENST00000302787 VPS13AQ96RL7 3174 aa12.31□□□□□ -0.44
LETM1-201ENST00000302787 Q5VSD8 79 aa12.31□□□□□ -0.44
LETM1-201ENST00000302787 M0R2T5 61 aa12.3□□□□□ -0.44
LETM1-201ENST00000302787 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
LETM1-201ENST00000302787 COL6A5A8TX70 2615 aa12.29□□□□□ -0.44
LETM1-201ENST00000302787 SETXQ7Z333 2677 aaKnown RBP12.28□□□□□ -0.44
LETM1-201ENST00000302787 H1FX-AS1Q4G0G2 97 aa12.27□□□□□ -0.44
LETM1-201ENST00000302787 IGSF10Q6WRI0 2623 aa12.27□□□□□ -0.44
LETM1-201ENST00000302787 A0A087X002 238 aa12.27□□□□□ -0.44
LETM1-201ENST00000302787 NOTCH1P46531 2555 aa12.27□□□□□ -0.45
LETM1-201ENST00000302787 R4GN34 69 aa12.27□□□□□ -0.45
LETM1-201ENST00000302787 KRTAP11-1Q8IUC1 163 aa12.27□□□□□ -0.45
LETM1-201ENST00000302787 RPL37P61927 97 aaKnown RBP12.26□□□□□ -0.45
LETM1-201ENST00000302787 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
LETM1-201ENST00000302787 LCE6AA0A183 80 aa12.25□□□□□ -0.45
LETM1-201ENST00000302787 KRTAP7-1Q8IUC3 87 aa12.22□□□□□ -0.45
LETM1-201ENST00000302787 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
LETM1-201ENST00000302787 ROMO1P60602 79 aa12.21□□□□□ -0.46
LETM1-201ENST00000302787 SEC61BP60468 96 aaKnown RBP12.2□□□□□ -0.46
LETM1-201ENST00000302787 Q6ZRN7 208 aaPredicted RBP12.13□□□□□ -0.47
LETM1-201ENST00000302787 UBR5O95071 2799 aaPredicted RBP12.13□□□□□ -0.47
LETM1-201ENST00000302787 ASB16-AS1Q495Z4 193 aa12.12□□□□□ -0.47
LETM1-201ENST00000302787 SPATA8Q6RVD6 105 aa12.12□□□□□ -0.47
LETM1-201ENST00000302787 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
LETM1-201ENST00000302787 H3BS24 57 aa12.1□□□□□ -0.47
LETM1-201ENST00000302787 M0QZ58 72 aa12.08□□□□□ -0.48
LETM1-201ENST00000302787 KALRNO60229 2985 aa12.05□□□□□ -0.48
LETM1-201ENST00000302787 ADM2Q7Z4H4 148 aa12.03□□□□□ -0.48
LETM1-201ENST00000302787 KRTAP13-1Q8IUC0 172 aa12.02□□□□□ -0.49
LETM1-201ENST00000302787 FREM2Q5SZK8 3169 aa12.02□□□□□ -0.49
LETM1-201ENST00000302787 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
LETM1-201ENST00000302787 ITPR1Q14643 2758 aa11.97□□□□□ -0.49
LETM1-201ENST00000302787 LAMA1P25391 3075 aa11.97□□□□□ -0.49
LETM1-201ENST00000302787 RPS29P62273 56 aaKnown RBP11.97□□□□□ -0.49
LETM1-201ENST00000302787 ITPR2Q14571 2701 aa11.94□□□□□ -0.5
LETM1-201ENST00000302787 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
LETM1-201ENST00000302787 DNAH14Q0VDD8 3507 aa11.93□□□□□ -0.5
LETM1-201ENST00000302787 VCANP13611 3396 aa11.93□□□□□ -0.5
LETM1-201ENST00000302787 SZT2Q5T011 3432 aa11.92□□□□□ -0.5
LETM1-201ENST00000302787 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
LETM1-201ENST00000302787 NBEAQ8NFP9 2946 aa11.92□□□□□ -0.5
LETM1-201ENST00000302787 A6NN06 94 aa11.92□□□□□ -0.5
LETM1-201ENST00000302787 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
LETM1-201ENST00000302787 ATMQ13315 3056 aa11.89□□□□□ -0.51
LETM1-201ENST00000302787 STAB2Q8WWQ8 2551 aa11.89□□□□□ -0.51
LETM1-201ENST00000302787 A0A0A0MQY5 61 aa11.89□□□□□ -0.51
LETM1-201ENST00000302787 LRBAP50851 2863 aa11.85□□□□□ -0.51
LETM1-201ENST00000302787 BAHCC1Q9P281 2608 aa11.84□□□□□ -0.51
LETM1-201ENST00000302787 FLNCQ14315 2725 aa11.83□□□□□ -0.51
LETM1-201ENST00000302787 A8MU10 97 aa11.82□□□□□ -0.52
LETM1-201ENST00000302787 ADGRG4Q8IZF6 3080 aa11.81□□□□□ -0.52
LETM1-201ENST00000302787 TACC2O95359 2948 aa11.8□□□□□ -0.52
LETM1-201ENST00000302787 BOD1L1Q8NFC6 3051 aa11.76□□□□□ -0.53
LETM1-201ENST00000302787 COL12A1Q99715 3063 aa11.75□□□□□ -0.53
LETM1-201ENST00000302787 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
LETM1-201ENST00000302787 KRTAP25-1Q3LHN0 102 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms