RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 RBM3P98179 157 aaKnown RBP12.48□□□□□ -0.41
PACSIN3-201ENST00000298838 F8WEM9 126 aa12.48□□□□□ -0.41
PACSIN3-201ENST00000298838 FAM229AH3BQW9 127 aa12.48□□□□□ -0.41
PACSIN3-201ENST00000298838 C14orf132Q9NPU4 83 aa12.47□□□□□ -0.41
PACSIN3-201ENST00000298838 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
PACSIN3-201ENST00000298838 KRTAP10-4P60372 401 aaPredicted RBP12.46□□□□□ -0.41
PACSIN3-201ENST00000298838 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.42
PACSIN3-201ENST00000298838 FAT1Q14517 4588 aa12.45□□□□□ -0.42
PACSIN3-201ENST00000298838 DSCR8Q96T75 97 aa12.44□□□□□ -0.42
PACSIN3-201ENST00000298838 HSPG2P98160 4391 aa12.42□□□□□ -0.42
PACSIN3-201ENST00000298838 Q5VSD8 79 aa12.41□□□□□ -0.42
PACSIN3-201ENST00000298838 ANAPC11Q9NYG5 84 aa12.41□□□□□ -0.42
PACSIN3-201ENST00000298838 RYR1P21817 5038 aa12.41□□□□□ -0.42
PACSIN3-201ENST00000298838 TRBV7-4A0A0J9YYF1 115 aa12.4□□□□□ -0.42
PACSIN3-201ENST00000298838 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
PACSIN3-201ENST00000298838 J3QR89 54 aa12.39□□□□□ -0.43
PACSIN3-201ENST00000298838 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
PACSIN3-201ENST00000298838 PDE6GP18545 87 aa12.38□□□□□ -0.43
PACSIN3-201ENST00000298838 IGLV9-49A0A0B4J1Y8 123 aa12.37□□□□□ -0.43
PACSIN3-201ENST00000298838 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
PACSIN3-201ENST00000298838 Q6ZQT0 140 aa12.36□□□□□ -0.43
PACSIN3-201ENST00000298838 K7ERU9 68 aa12.35□□□□□ -0.43
PACSIN3-201ENST00000298838 KRTAP1-4P0C5Y4 121 aa12.35□□□□□ -0.43
PACSIN3-201ENST00000298838 C9orf153Q5TBE3 101 aa12.35□□□□□ -0.43
PACSIN3-201ENST00000298838 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
PACSIN3-201ENST00000298838 CCKP06307 115 aa12.33□□□□□ -0.44
PACSIN3-201ENST00000298838 Q6JHZ5 121 aa12.33□□□□□ -0.44
PACSIN3-201ENST00000298838 Q8N1X5 172 aa12.32□□□□□ -0.44
PACSIN3-201ENST00000298838 C21orf62-AS1Q17RA5 79 aa12.32□□□□□ -0.44
PACSIN3-201ENST00000298838 Q8NBF4 154 aa12.32□□□□□ -0.44
PACSIN3-201ENST00000298838 MOBPQ13875 183 aa12.31□□□□□ -0.44
PACSIN3-201ENST00000298838 IGFL1Q6UW32 110 aa12.31□□□□□ -0.44
PACSIN3-201ENST00000298838 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
PACSIN3-201ENST00000298838 A0A087X002 238 aa12.3□□□□□ -0.44
PACSIN3-201ENST00000298838 CRYGAP11844 174 aa12.29□□□□□ -0.44
PACSIN3-201ENST00000298838 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
PACSIN3-201ENST00000298838 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
PACSIN3-201ENST00000298838 FAM240AA0A1B0GVK7 77 aa12.26□□□□□ -0.45
PACSIN3-201ENST00000298838 ACYP1P07311 99 aa12.25□□□□□ -0.45
PACSIN3-201ENST00000298838 A0A1W2PNM2 257 aa12.24□□□□□ -0.45
PACSIN3-201ENST00000298838 KRTAP13-2Q52LG2 175 aa12.23□□□□□ -0.45
PACSIN3-201ENST00000298838 SSBP3-AS1Q7Z2R9 100 aa12.22□□□□□ -0.45
PACSIN3-201ENST00000298838 A0A1B0GW54 56 aa12.19□□□□□ -0.46
PACSIN3-201ENST00000298838 Q6Q795 121 aa12.18□□□□□ -0.46
PACSIN3-201ENST00000298838 PRR26Q8N8Z3 221 aa12.17□□□□□ -0.46
PACSIN3-201ENST00000298838 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
PACSIN3-201ENST00000298838 LINC00846Q9NV44 126 aa12.16□□□□□ -0.46
PACSIN3-201ENST00000298838 BIRC6Q9NR09 4857 aa12.16□□□□□ -0.46
PACSIN3-201ENST00000298838 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
PACSIN3-201ENST00000298838 HRCT1Q6UXD1 115 aa12.13□□□□□ -0.47
PACSIN3-201ENST00000298838 A0A087WSZ3 146 aa12.11□□□□□ -0.47
PACSIN3-201ENST00000298838 TRBV7-7A0A0K0K1E9 115 aa12.11□□□□□ -0.47
PACSIN3-201ENST00000298838 CD164Q04900 197 aa12.11□□□□□ -0.47
PACSIN3-201ENST00000298838 UBL5Q9BZL1 73 aa12.11□□□□□ -0.47
PACSIN3-201ENST00000298838 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
PACSIN3-201ENST00000298838 Q6ZVQ6 151 aa12.05□□□□□ -0.48
PACSIN3-201ENST00000298838 NREPQ16612 68 aa12.04□□□□□ -0.48
PACSIN3-201ENST00000298838 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
PACSIN3-201ENST00000298838 KRTAP4-5Q9BYR2 181 aa12.04□□□□□ -0.48
PACSIN3-201ENST00000298838 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
PACSIN3-201ENST00000298838 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
PACSIN3-201ENST00000298838 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
PACSIN3-201ENST00000298838 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
PACSIN3-201ENST00000298838 SPINK1P00995 79 aa12□□□□□ -0.49
PACSIN3-201ENST00000298838 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
PACSIN3-201ENST00000298838 LRP1Q07954 4544 aaKnown RBP11.98□□□□□ -0.49
PACSIN3-201ENST00000298838 HERC2O95714 4834 aa11.96□□□□□ -0.49
PACSIN3-201ENST00000298838 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
PACSIN3-201ENST00000298838 LIMD2Q9BT23 127 aa11.96□□□□□ -0.49
PACSIN3-201ENST00000298838 Q5XG85 94 aa11.95□□□□□ -0.5
PACSIN3-201ENST00000298838 RPS29P62273 56 aaKnown RBP11.93□□□□□ -0.5
PACSIN3-201ENST00000298838 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
PACSIN3-201ENST00000298838 MYCBP2O75592 4640 aa11.93□□□□□ -0.5
PACSIN3-201ENST00000298838 LINC00472Q9H8W2 130 aa11.92□□□□□ -0.5
PACSIN3-201ENST00000298838 BPY2O14599 106 aa11.91□□□□□ -0.5
PACSIN3-201ENST00000298838 OXTP01178 125 aa11.91□□□□□ -0.5
PACSIN3-201ENST00000298838 FAT3Q8TDW7 4589 aa11.91□□□□□ -0.5
PACSIN3-201ENST00000298838 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.5
PACSIN3-201ENST00000298838 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
PACSIN3-201ENST00000298838 CXCL6P80162 114 aa11.9□□□□□ -0.5
PACSIN3-201ENST00000298838 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
PACSIN3-201ENST00000298838 MT-ATP8P03928 68 aa11.89□□□□□ -0.51
PACSIN3-201ENST00000298838 DEFB116Q30KQ4 102 aa11.88□□□□□ -0.51
PACSIN3-201ENST00000298838 Q96NJ1 140 aa11.88□□□□□ -0.51
PACSIN3-201ENST00000298838 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
PACSIN3-201ENST00000298838 TNXBP22105 4242 aa11.85□□□□□ -0.51
PACSIN3-201ENST00000298838 J3KT08 172 aa11.84□□□□□ -0.51
PACSIN3-201ENST00000298838 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
PACSIN3-201ENST00000298838 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
PACSIN3-201ENST00000298838 ABCA13Q86UQ4 5058 aa11.81□□□□□ -0.52
PACSIN3-201ENST00000298838 DSCR10P59022 87 aa11.81□□□□□ -0.52
PACSIN3-201ENST00000298838 C1orf195Q5TG92 126 aa11.81□□□□□ -0.52
PACSIN3-201ENST00000298838 HIST1H4AP62805 103 aaKnown RBP11.78□□□□□ -0.52
PACSIN3-201ENST00000298838 IMUPQ9GZP8 106 aa11.78□□□□□ -0.52
PACSIN3-201ENST00000298838 Q8N9L7 120 aa11.77□□□□□ -0.52
PACSIN3-201ENST00000298838 A8MWP4 228 aa11.76□□□□□ -0.53
PACSIN3-201ENST00000298838 PCP4P48539 62 aa11.76□□□□□ -0.53
PACSIN3-201ENST00000298838 K7EQZ3 153 aa11.76□□□□□ -0.53
PACSIN3-201ENST00000298838 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
PACSIN3-201ENST00000298838 NDUFB1O75438 58 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms