RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 SMR3BP02814 79 aaPredicted RBP10.14□□□□□ -0.79
SNAPC4-201ENST00000298532 TNP2Q05952 138 aa10.13□□□□□ -0.79
SNAPC4-201ENST00000298532 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
SNAPC4-201ENST00000298532 PCNTO95613 3336 aa10.13□□□□□ -0.79
SNAPC4-201ENST00000298532 CENPEQ02224 2701 aa10.12□□□□□ -0.79
SNAPC4-201ENST00000298532 H3BS24 57 aa10.12□□□□□ -0.79
SNAPC4-201ENST00000298532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.12□□□□□ -0.79
SNAPC4-201ENST00000298532 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
SNAPC4-201ENST00000298532 LCE6AA0A183 80 aa10.09□□□□□ -0.79
SNAPC4-201ENST00000298532 C5orf42Q9H799 3197 aa10.08□□□□□ -0.8
SNAPC4-201ENST00000298532 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
SNAPC4-201ENST00000298532 LUZP6Q538Z0 58 aa10.06□□□□□ -0.8
SNAPC4-201ENST00000298532 Q5W150 140 aa10.06□□□□□ -0.8
SNAPC4-201ENST00000298532 TEP1Q99973 2627 aaKnown RBP10.06□□□□□ -0.8
SNAPC4-201ENST00000298532 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
SNAPC4-201ENST00000298532 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
SNAPC4-201ENST00000298532 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
SNAPC4-201ENST00000298532 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
SNAPC4-201ENST00000298532 SETXQ7Z333 2677 aaKnown RBP10.01□□□□□ -0.81
SNAPC4-201ENST00000298532 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
SNAPC4-201ENST00000298532 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
SNAPC4-201ENST00000298532 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
SNAPC4-201ENST00000298532 COL6A5A8TX70 2615 aa9.99□□□□□ -0.81
SNAPC4-201ENST00000298532 PLAC8Q9NZF1 115 aa9.98□□□□□ -0.81
SNAPC4-201ENST00000298532 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
SNAPC4-201ENST00000298532 Q6ZR54 194 aa9.93□□□□□ -0.82
SNAPC4-201ENST00000298532 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
SNAPC4-201ENST00000298532 ASB16-AS1Q495Z4 193 aa9.92□□□□□ -0.82
SNAPC4-201ENST00000298532 GCN1Q92616 2671 aaKnown RBP9.92□□□□□ -0.82
SNAPC4-201ENST00000298532 MGAQ8IWI9 3026 aa9.91□□□□□ -0.82
SNAPC4-201ENST00000298532 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
SNAPC4-201ENST00000298532 NBEAL1Q6ZS30 2694 aa9.88□□□□□ -0.83
SNAPC4-201ENST00000298532 DSPP15924 2871 aaKnown RBP9.87□□□□□ -0.83
SNAPC4-201ENST00000298532 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
SNAPC4-201ENST00000298532 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
SNAPC4-201ENST00000298532 Q6ZSA8 131 aa9.8□□□□□ -0.84
SNAPC4-201ENST00000298532 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
SNAPC4-201ENST00000298532 NOTCH1P46531 2555 aa9.8□□□□□ -0.84
SNAPC4-201ENST00000298532 LAMA3Q16787 3333 aa9.8□□□□□ -0.84
SNAPC4-201ENST00000298532 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
SNAPC4-201ENST00000298532 ROMO1P60602 79 aa9.77□□□□□ -0.84
SNAPC4-201ENST00000298532 S4R3F8 94 aa9.77□□□□□ -0.85
SNAPC4-201ENST00000298532 A6NN06 94 aa9.76□□□□□ -0.85
SNAPC4-201ENST00000298532 LAMA2P24043 3122 aaKnown RBP9.75□□□□□ -0.85
SNAPC4-201ENST00000298532 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
SNAPC4-201ENST00000298532 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
SNAPC4-201ENST00000298532 MKI67P46013 3256 aaKnown RBP9.73□□□□□ -0.85
SNAPC4-201ENST00000298532 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
SNAPC4-201ENST00000298532 A0A0A0MQY5 61 aa9.72□□□□□ -0.85
SNAPC4-201ENST00000298532 Q5VSD8 79 aa9.71□□□□□ -0.85
SNAPC4-201ENST00000298532 NBEAL2Q6ZNJ1 2754 aa9.71□□□□□ -0.86
SNAPC4-201ENST00000298532 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
SNAPC4-201ENST00000298532 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.86
SNAPC4-201ENST00000298532 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
SNAPC4-201ENST00000298532 KMT2BQ9UMN6 2715 aaPredicted RBP9.62□□□□□ -0.87
SNAPC4-201ENST00000298532 MAP1AP78559 2803 aaPredicted RBP9.62□□□□□ -0.87
SNAPC4-201ENST00000298532 A0A087X002 238 aa9.61□□□□□ -0.87
SNAPC4-201ENST00000298532 NOTCH2NLQ7Z3S9 236 aa9.61□□□□□ -0.87
SNAPC4-201ENST00000298532 PANO1I0J062 215 aa9.6□□□□□ -0.87
SNAPC4-201ENST00000298532 KRTAP10-2P60368 255 aa9.6□□□□□ -0.87
SNAPC4-201ENST00000298532 R4GN34 69 aa9.6□□□□□ -0.87
SNAPC4-201ENST00000298532 WDFY4Q6ZS81 3184 aa9.59□□□□□ -0.87
SNAPC4-201ENST00000298532 FRYQ5TBA9 3013 aa9.58□□□□□ -0.88
SNAPC4-201ENST00000298532 PRUNE2Q8WUY3 3088 aa9.57□□□□□ -0.88
SNAPC4-201ENST00000298532 FLNCQ14315 2725 aa9.56□□□□□ -0.88
SNAPC4-201ENST00000298532 TRIOO75962 3097 aa9.55□□□□□ -0.88
SNAPC4-201ENST00000298532 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
SNAPC4-201ENST00000298532 A8MU10 97 aa9.54□□□□□ -0.88
SNAPC4-201ENST00000298532 NSD1Q96L73 2696 aaPredicted RBP9.54□□□□□ -0.88
SNAPC4-201ENST00000298532 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
SNAPC4-201ENST00000298532 BRCA2P51587 3418 aa9.53□□□□□ -0.88
SNAPC4-201ENST00000298532 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
SNAPC4-201ENST00000298532 KRTAP25-1Q3LHN0 102 aa9.53□□□□□ -0.88
SNAPC4-201ENST00000298532 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
SNAPC4-201ENST00000298532 HIVEP1P15822 2718 aa9.5□□□□□ -0.89
SNAPC4-201ENST00000298532 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
SNAPC4-201ENST00000298532 ADM2Q7Z4H4 148 aa9.48□□□□□ -0.89
SNAPC4-201ENST00000298532 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.89
SNAPC4-201ENST00000298532 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
SNAPC4-201ENST00000298532 FREM2Q5SZK8 3169 aa9.44□□□□□ -0.9
SNAPC4-201ENST00000298532 M0QZ58 72 aa9.43□□□□□ -0.9
SNAPC4-201ENST00000298532 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
SNAPC4-201ENST00000298532 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
SNAPC4-201ENST00000298532 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.91
SNAPC4-201ENST00000298532 KALRNO60229 2985 aa9.39□□□□□ -0.91
SNAPC4-201ENST00000298532 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
SNAPC4-201ENST00000298532 M0R2T5 61 aa9.38□□□□□ -0.91
SNAPC4-201ENST00000298532 KRTAP13-1Q8IUC0 172 aa9.37□□□□□ -0.91
SNAPC4-201ENST00000298532 UNC80Q8N2C7 3258 aa9.33□□□□□ -0.92
SNAPC4-201ENST00000298532 APCP25054 2843 aa9.31□□□□□ -0.92
SNAPC4-201ENST00000298532 RPS29P62273 56 aaKnown RBP9.3□□□□□ -0.92
SNAPC4-201ENST00000298532 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
SNAPC4-201ENST00000298532 UTP20O75691 2785 aaKnown RBP9.28□□□□□ -0.92
SNAPC4-201ENST00000298532 TENM4Q6N022 2769 aa9.23□□□□□ -0.93
SNAPC4-201ENST00000298532 NDUFAF8A1L188 74 aa9.22□□□□□ -0.93
SNAPC4-201ENST00000298532 FRYLO94915 3013 aa9.22□□□□□ -0.93
SNAPC4-201ENST00000298532 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
SNAPC4-201ENST00000298532 ATMQ13315 3056 aa9.19□□□□□ -0.94
SNAPC4-201ENST00000298532 ASH1LQ9NR48 2969 aaKnown RBP9.19□□□□□ -0.94
SNAPC4-201ENST00000298532 CDH23Q9H251 3354 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms