RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 Q6ZR54 194 aa4.15□□□□□ -1.75
GAPVD1-202ENST00000297933 Q1T7F1 81 aa4.14□□□□□ -1.75
GAPVD1-202ENST00000297933 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
GAPVD1-202ENST00000297933 CHD9Q3L8U1 2897 aa4.14□□□□□ -1.75
GAPVD1-202ENST00000297933 Q8NDZ9 215 aa4.14□□□□□ -1.75
GAPVD1-202ENST00000297933 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
GAPVD1-202ENST00000297933 RANBP2P49792 3224 aaKnown RBP4.13□□□□□ -1.75
GAPVD1-202ENST00000297933 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
GAPVD1-202ENST00000297933 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
GAPVD1-202ENST00000297933 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
GAPVD1-202ENST00000297933 HTTP42858 3142 aa4.11□□□□□ -1.75
GAPVD1-202ENST00000297933 C5orf42Q9H799 3197 aa4.11□□□□□ -1.75
GAPVD1-202ENST00000297933 CENPEQ02224 2701 aa4.11□□□□□ -1.75
GAPVD1-202ENST00000297933 LCA10Q71F78 164 aa4.1□□□□□ -1.75
GAPVD1-202ENST00000297933 ZNF292O60281 2723 aa4.1□□□□□ -1.75
GAPVD1-202ENST00000297933 M0QZ58 72 aa4.09□□□□□ -1.75
GAPVD1-202ENST00000297933 PCNTO95613 3336 aa4.09□□□□□ -1.75
GAPVD1-202ENST00000297933 PANO1I0J062 215 aa4.09□□□□□ -1.75
GAPVD1-202ENST00000297933 BPTFQ12830 3046 aa4.09□□□□□ -1.76
GAPVD1-202ENST00000297933 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
GAPVD1-202ENST00000297933 SETXQ7Z333 2677 aaKnown RBP4.07□□□□□ -1.76
GAPVD1-202ENST00000297933 TEP1Q99973 2627 aaKnown RBP4.07□□□□□ -1.76
GAPVD1-202ENST00000297933 BAHCC1Q9P281 2608 aa4.06□□□□□ -1.76
GAPVD1-202ENST00000297933 A0A087X002 238 aa4.06□□□□□ -1.76
GAPVD1-202ENST00000297933 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
GAPVD1-202ENST00000297933 LAMA3Q16787 3333 aa4.04□□□□□ -1.76
GAPVD1-202ENST00000297933 TRANK1O15050 2925 aa4.04□□□□□ -1.76
GAPVD1-202ENST00000297933 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
GAPVD1-202ENST00000297933 Q75L30 129 aa4.03□□□□□ -1.76
GAPVD1-202ENST00000297933 MKI67P46013 3256 aaKnown RBP4.01□□□□□ -1.77
GAPVD1-202ENST00000297933 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
GAPVD1-202ENST00000297933 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
GAPVD1-202ENST00000297933 MGAQ8IWI9 3026 aa4□□□□□ -1.77
GAPVD1-202ENST00000297933 STAB1Q9NY15 2570 aa4□□□□□ -1.77
GAPVD1-202ENST00000297933 RPL37P61927 97 aaKnown RBP4□□□□□ -1.77
GAPVD1-202ENST00000297933 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
GAPVD1-202ENST00000297933 H1FX-AS1Q4G0G2 97 aa4□□□□□ -1.77
GAPVD1-202ENST00000297933 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
GAPVD1-202ENST00000297933 IGSF10Q6WRI0 2623 aa3.99□□□□□ -1.77
GAPVD1-202ENST00000297933 TEX15Q9BXT5 2789 aa3.99□□□□□ -1.77
GAPVD1-202ENST00000297933 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
GAPVD1-202ENST00000297933 AKAP13Q12802 2813 aa3.98□□□□□ -1.77
GAPVD1-202ENST00000297933 BRCA2P51587 3418 aa3.98□□□□□ -1.77
GAPVD1-202ENST00000297933 DSPP15924 2871 aaKnown RBP3.97□□□□□ -1.77
GAPVD1-202ENST00000297933 A0A0C4DFX4 3053 aa3.96□□□□□ -1.78
GAPVD1-202ENST00000297933 ROMO1P60602 79 aa3.95□□□□□ -1.78
GAPVD1-202ENST00000297933 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
GAPVD1-202ENST00000297933 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
GAPVD1-202ENST00000297933 PRUNE2Q8WUY3 3088 aa3.95□□□□□ -1.78
GAPVD1-202ENST00000297933 KRTAP11-1Q8IUC1 163 aa3.94□□□□□ -1.78
GAPVD1-202ENST00000297933 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
GAPVD1-202ENST00000297933 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
GAPVD1-202ENST00000297933 A8MUU9 505 aa3.92□□□□□ -1.78
GAPVD1-202ENST00000297933 GCN1Q92616 2671 aaKnown RBP3.92□□□□□ -1.78
GAPVD1-202ENST00000297933 CHD6Q8TD26 2715 aa3.92□□□□□ -1.78
GAPVD1-202ENST00000297933 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
GAPVD1-202ENST00000297933 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
GAPVD1-202ENST00000297933 Q5VV11 94 aa3.9□□□□□ -1.78
GAPVD1-202ENST00000297933 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-202ENST00000297933 NOTCH1P46531 2555 aa3.88□□□□□ -1.79
GAPVD1-202ENST00000297933 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
GAPVD1-202ENST00000297933 Q5XG85 94 aa3.88□□□□□ -1.79
GAPVD1-202ENST00000297933 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
GAPVD1-202ENST00000297933 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
GAPVD1-202ENST00000297933 CFAP54Q96N23 3096 aa3.86□□□□□ -1.79
GAPVD1-202ENST00000297933 TRIOO75962 3097 aa3.86□□□□□ -1.79
GAPVD1-202ENST00000297933 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
GAPVD1-202ENST00000297933 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
GAPVD1-202ENST00000297933 UNC80Q8N2C7 3258 aa3.85□□□□□ -1.79
GAPVD1-202ENST00000297933 NBEAL1Q6ZS30 2694 aa3.85□□□□□ -1.79
GAPVD1-202ENST00000297933 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.79
GAPVD1-202ENST00000297933 UBR5O95071 2799 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-202ENST00000297933 MAP1AP78559 2803 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-202ENST00000297933 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-202ENST00000297933 LAMA2P24043 3122 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-202ENST00000297933 CDH23Q9H251 3354 aa3.81□□□□□ -1.8
GAPVD1-202ENST00000297933 ITPR2Q14571 2701 aa3.81□□□□□ -1.8
GAPVD1-202ENST00000297933 FLNCQ14315 2725 aa3.79□□□□□ -1.8
GAPVD1-202ENST00000297933 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
GAPVD1-202ENST00000297933 A0A1B0GVY2 172 aa3.78□□□□□ -1.8
GAPVD1-202ENST00000297933 TNP1P09430 55 aa3.78□□□□□ -1.8
GAPVD1-202ENST00000297933 ITPR1Q14643 2758 aa3.78□□□□□ -1.8
GAPVD1-202ENST00000297933 A8MU10 97 aa3.78□□□□□ -1.81
GAPVD1-202ENST00000297933 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
GAPVD1-202ENST00000297933 XP32Q5T750 250 aa3.76□□□□□ -1.81
GAPVD1-202ENST00000297933 VPS13AQ96RL7 3174 aa3.76□□□□□ -1.81
GAPVD1-202ENST00000297933 DMBT1Q9UGM3 2413 aaPredicted RBP3.76□□□□□ -1.81
GAPVD1-202ENST00000297933 NSD1Q96L73 2696 aaPredicted RBP3.76□□□□□ -1.81
GAPVD1-202ENST00000297933 SZT2Q5T011 3432 aa3.75□□□□□ -1.81
GAPVD1-202ENST00000297933 HIVEP1P15822 2718 aa3.75□□□□□ -1.81
GAPVD1-202ENST00000297933 REV3LO60673 3130 aa3.74□□□□□ -1.81
GAPVD1-202ENST00000297933 STAB2Q8WWQ8 2551 aa3.74□□□□□ -1.81
GAPVD1-202ENST00000297933 KRTAP10-8P60410 259 aa3.74□□□□□ -1.81
GAPVD1-202ENST00000297933 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
GAPVD1-202ENST00000297933 ATMQ13315 3056 aa3.73□□□□□ -1.81
GAPVD1-202ENST00000297933 FRYLO94915 3013 aa3.73□□□□□ -1.81
GAPVD1-202ENST00000297933 NBEAL2Q6ZNJ1 2754 aa3.73□□□□□ -1.81
GAPVD1-202ENST00000297933 TNRC18O15417 2968 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-202ENST00000297933 COL12A1Q99715 3063 aa3.72□□□□□ -1.81
GAPVD1-202ENST00000297933 KRTAP1-4P0C5Y4 121 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms