RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 FAM229BQ4G0N7 80 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 KRTAP13-2Q52LG2 175 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 PRR26Q8N8Z3 221 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 C9JAW5 83 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 MTURNQ8N3F0 131 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 LINC01600Q96MT4 127 aa12.89□□□□□ -0.35
PDLIM3-203ENST00000284771 A0A1B0GV90 55 aa12.88□□□□□ -0.35
PDLIM3-203ENST00000284771 BAALC-AS2P0C853 105 aa12.87□□□□□ -0.35
PDLIM3-203ENST00000284771 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
PDLIM3-203ENST00000284771 CRYGAP11844 174 aa12.86□□□□□ -0.35
PDLIM3-203ENST00000284771 PCLOQ9Y6V0 5065 aa12.86□□□□□ -0.35
PDLIM3-203ENST00000284771 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
PDLIM3-203ENST00000284771 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
PDLIM3-203ENST00000284771 LAMTOR3Q9UHA4 124 aa12.83□□□□□ -0.35
PDLIM3-203ENST00000284771 GHRHP01286 108 aa12.83□□□□□ -0.36
PDLIM3-203ENST00000284771 GTF2H5Q6ZYL4 71 aa12.83□□□□□ -0.36
PDLIM3-203ENST00000284771 TNXBP22105 4242 aa12.82□□□□□ -0.36
PDLIM3-203ENST00000284771 NDUFV3P56181 108 aaKnown RBP12.82□□□□□ -0.36
PDLIM3-203ENST00000284771 PRO0461Q9UI25 63 aa12.81□□□□□ -0.36
PDLIM3-203ENST00000284771 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
PDLIM3-203ENST00000284771 H3BQ85 93 aa12.8□□□□□ -0.36
PDLIM3-203ENST00000284771 KRTAP10-8P60410 259 aa12.8□□□□□ -0.36
PDLIM3-203ENST00000284771 UBE2V1Q13404 147 aa12.8□□□□□ -0.36
PDLIM3-203ENST00000284771 MOBPQ13875 183 aa12.8□□□□□ -0.36
PDLIM3-203ENST00000284771 MT1HL1P0DM35 61 aa12.78□□□□□ -0.36
PDLIM3-203ENST00000284771 OXTP01178 125 aa12.77□□□□□ -0.37
PDLIM3-203ENST00000284771 C9orf153Q5TBE3 101 aa12.77□□□□□ -0.37
PDLIM3-203ENST00000284771 ANKRD29Q8N6D5 301 aa12.77□□□□□ -0.37
PDLIM3-203ENST00000284771 A0A0G2JQZ4 141 aa12.76□□□□□ -0.37
PDLIM3-203ENST00000284771 H3BT86 120 aa12.76□□□□□ -0.37
PDLIM3-203ENST00000284771 TYMSOSQ8TAI1 123 aa12.76□□□□□ -0.37
PDLIM3-203ENST00000284771 A0A1B0GV72 72 aa12.75□□□□□ -0.37
PDLIM3-203ENST00000284771 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
PDLIM3-203ENST00000284771 IGLV8-61A0A075B6I0 122 aa12.74□□□□□ -0.37
PDLIM3-203ENST00000284771 Q8NBF4 154 aa12.73□□□□□ -0.37
PDLIM3-203ENST00000284771 F8WEM9 126 aa12.73□□□□□ -0.37
PDLIM3-203ENST00000284771 SSBP3-AS1Q7Z2R9 100 aa12.72□□□□□ -0.37
PDLIM3-203ENST00000284771 F8W1H4 67 aa12.69□□□□□ -0.38
PDLIM3-203ENST00000284771 IGFL1Q6UW32 110 aa12.69□□□□□ -0.38
PDLIM3-203ENST00000284771 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
PDLIM3-203ENST00000284771 OBSCN-AS1Q96MR7 158 aa12.67□□□□□ -0.38
PDLIM3-203ENST00000284771 RBM3P98179 157 aaKnown RBP12.65□□□□□ -0.38
PDLIM3-203ENST00000284771 Q6JHZ5 121 aa12.64□□□□□ -0.39
PDLIM3-203ENST00000284771 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
PDLIM3-203ENST00000284771 JMJD7-PLA2G4BH0Y9G9 81 aa12.63□□□□□ -0.39
PDLIM3-203ENST00000284771 LINC00304Q8N9R0 145 aa12.61□□□□□ -0.39
PDLIM3-203ENST00000284771 HRCT1Q6UXD1 115 aa12.6□□□□□ -0.39
PDLIM3-203ENST00000284771 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
PDLIM3-203ENST00000284771 ETDBQ3ZM63 59 aa12.58□□□□□ -0.4
PDLIM3-203ENST00000284771 DSCR8Q96T75 97 aa12.58□□□□□ -0.4
PDLIM3-203ENST00000284771 A0A1W2PNM2 257 aa12.57□□□□□ -0.4
PDLIM3-203ENST00000284771 J3QL48 77 aa12.57□□□□□ -0.4
PDLIM3-203ENST00000284771 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
PDLIM3-203ENST00000284771 Q6ZQT0 140 aa12.54□□□□□ -0.4
PDLIM3-203ENST00000284771 LOC110117498A0A087WWA1 95 aa12.54□□□□□ -0.4
PDLIM3-203ENST00000284771 CD164Q04900 197 aa12.54□□□□□ -0.4
PDLIM3-203ENST00000284771 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
PDLIM3-203ENST00000284771 SPAG11AQ6PDA7 123 aa12.53□□□□□ -0.4
PDLIM3-203ENST00000284771 CCKP06307 115 aa12.52□□□□□ -0.4
PDLIM3-203ENST00000284771 Q6Q795 121 aa12.52□□□□□ -0.4
PDLIM3-203ENST00000284771 SPINK1P00995 79 aa12.51□□□□□ -0.41
PDLIM3-203ENST00000284771 TRBV7-7A0A0K0K1E9 115 aa12.48□□□□□ -0.41
PDLIM3-203ENST00000284771 VPS25Q9BRG1 176 aa12.48□□□□□ -0.41
PDLIM3-203ENST00000284771 PDE6GP18545 87 aa12.47□□□□□ -0.41
PDLIM3-203ENST00000284771 RPS29P62273 56 aaKnown RBP12.45□□□□□ -0.42
PDLIM3-203ENST00000284771 A0A087WSZ3 146 aa12.44□□□□□ -0.42
PDLIM3-203ENST00000284771 HERC1Q15751 4861 aa12.42□□□□□ -0.42
PDLIM3-203ENST00000284771 Q5XG85 94 aa12.41□□□□□ -0.42
PDLIM3-203ENST00000284771 RETNLBQ9BQ08 111 aa12.36□□□□□ -0.43
PDLIM3-203ENST00000284771 LIMD2Q9BT23 127 aa12.36□□□□□ -0.43
PDLIM3-203ENST00000284771 A0A1B0GW54 56 aa12.32□□□□□ -0.44
PDLIM3-203ENST00000284771 C21orf62-AS1Q17RA5 79 aa12.32□□□□□ -0.44
PDLIM3-203ENST00000284771 ASB16-AS1Q495Z4 193 aa12.32□□□□□ -0.44
PDLIM3-203ENST00000284771 C1orf195Q5TG92 126 aa12.31□□□□□ -0.44
PDLIM3-203ENST00000284771 Q96NJ1 140 aa12.3□□□□□ -0.44
PDLIM3-203ENST00000284771 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
PDLIM3-203ENST00000284771 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
PDLIM3-203ENST00000284771 LINC00472Q9H8W2 130 aa12.26□□□□□ -0.45
PDLIM3-203ENST00000284771 DEFB116Q30KQ4 102 aa12.23□□□□□ -0.45
PDLIM3-203ENST00000284771 NREPQ16612 68 aa12.19□□□□□ -0.46
PDLIM3-203ENST00000284771 Q6ZVQ6 151 aa12.18□□□□□ -0.46
PDLIM3-203ENST00000284771 FAM240AA0A1B0GVK7 77 aa12.17□□□□□ -0.46
PDLIM3-203ENST00000284771 PRR4Q16378 134 aa12.17□□□□□ -0.46
PDLIM3-203ENST00000284771 FP248Q71RG6 208 aaPredicted RBP12.15□□□□□ -0.46
PDLIM3-203ENST00000284771 ACYP1P07311 99 aa12.14□□□□□ -0.47
PDLIM3-203ENST00000284771 HMCN2Q8NDA2 5059 aa12.14□□□□□ -0.47
PDLIM3-203ENST00000284771 IGKV4-1P06312 121 aa12.13□□□□□ -0.47
PDLIM3-203ENST00000284771 IGLV7-46A0A075B6I9 117 aa12.13□□□□□ -0.47
PDLIM3-203ENST00000284771 LPAP08519 4548 aa12.12□□□□□ -0.47
PDLIM3-203ENST00000284771 UBL5Q9BZL1 73 aa12.12□□□□□ -0.47
PDLIM3-203ENST00000284771 J3QR89 54 aa12.1□□□□□ -0.47
PDLIM3-203ENST00000284771 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
PDLIM3-203ENST00000284771 DSCR10P59022 87 aa12.06□□□□□ -0.48
PDLIM3-203ENST00000284771 J3KT08 172 aa12.05□□□□□ -0.48
PDLIM3-203ENST00000284771 BPY2O14599 106 aa12.03□□□□□ -0.48
PDLIM3-203ENST00000284771 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
PDLIM3-203ENST00000284771 K7ERU9 68 aa12.02□□□□□ -0.49
PDLIM3-203ENST00000284771 IGKV3D-7A0A0C4DH55 119 aa12□□□□□ -0.49
PDLIM3-203ENST00000284771 A8MWP4 228 aa12□□□□□ -0.49
PDLIM3-203ENST00000284771 TPRXLQ17RH7 258 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms