RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 SPRR1AP35321 89 aa13.73□□□□□ -0.21
CRIM1-201ENST00000280527 ROMO1P60602 79 aa13.73□□□□□ -0.21
CRIM1-201ENST00000280527 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
CRIM1-201ENST00000280527 RPL37P61927 97 aaKnown RBP13.66□□□□□ -0.22
CRIM1-201ENST00000280527 ATRQ13535 2644 aa13.65□□□□□ -0.22
CRIM1-201ENST00000280527 R4GN34 69 aa13.65□□□□□ -0.22
CRIM1-201ENST00000280527 KRTAP26-1Q6PEX3 210 aa13.6□□□□□ -0.23
CRIM1-201ENST00000280527 H1FX-AS1Q4G0G2 97 aa13.59□□□□□ -0.23
CRIM1-201ENST00000280527 PLAC8Q9NZF1 115 aa13.58□□□□□ -0.24
CRIM1-201ENST00000280527 SPRR1BP22528 89 aa13.56□□□□□ -0.24
CRIM1-201ENST00000280527 SPATA8Q6RVD6 105 aa13.55□□□□□ -0.24
CRIM1-201ENST00000280527 MKI67P46013 3256 aaKnown RBP13.53□□□□□ -0.24
CRIM1-201ENST00000280527 MAST4O15021 2626 aa13.52□□□□□ -0.24
CRIM1-201ENST00000280527 HTTP42858 3142 aa13.48□□□□□ -0.25
CRIM1-201ENST00000280527 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.25
CRIM1-201ENST00000280527 LAMA3Q16787 3333 aa13.46□□□□□ -0.26
CRIM1-201ENST00000280527 BRCA2P51587 3418 aa13.45□□□□□ -0.26
CRIM1-201ENST00000280527 FLNAP21333 2647 aaKnown RBP13.45□□□□□ -0.26
CRIM1-201ENST00000280527 M0QZ58 72 aa13.44□□□□□ -0.26
CRIM1-201ENST00000280527 KRTAP16-1A8MUX0 517 aa13.42□□□□□ -0.26
CRIM1-201ENST00000280527 Q6ZR54 194 aa13.38□□□□□ -0.27
CRIM1-201ENST00000280527 ITPR3Q14573 2671 aa13.38□□□□□ -0.27
CRIM1-201ENST00000280527 Q5VSD8 79 aa13.38□□□□□ -0.27
CRIM1-201ENST00000280527 ASB16-AS1Q495Z4 193 aa13.37□□□□□ -0.27
CRIM1-201ENST00000280527 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
CRIM1-201ENST00000280527 KRTAP1-5Q9BYS1 174 aa13.35□□□□□ -0.27
CRIM1-201ENST00000280527 CHD9Q3L8U1 2897 aa13.35□□□□□ -0.27
CRIM1-201ENST00000280527 KRTAP29-1A8MX34 341 aaPredicted RBP13.32□□□□□ -0.28
CRIM1-201ENST00000280527 FLG2Q5D862 2391 aaPredicted RBP13.32□□□□□ -0.28
CRIM1-201ENST00000280527 A6NN06 94 aa13.31□□□□□ -0.28
CRIM1-201ENST00000280527 SEC61BP60468 96 aaKnown RBP13.31□□□□□ -0.28
CRIM1-201ENST00000280527 ADM2Q7Z4H4 148 aa13.31□□□□□ -0.28
CRIM1-201ENST00000280527 KRTAP10-1P60331 282 aa13.26□□□□□ -0.29
CRIM1-201ENST00000280527 KRTAP25-1Q3LHN0 102 aa13.25□□□□□ -0.29
CRIM1-201ENST00000280527 KRTAP10-2P60368 255 aa13.24□□□□□ -0.29
CRIM1-201ENST00000280527 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.29
CRIM1-201ENST00000280527 A8MU10 97 aa13.2□□□□□ -0.3
CRIM1-201ENST00000280527 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
CRIM1-201ENST00000280527 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
CRIM1-201ENST00000280527 A0A087X002 238 aa13.19□□□□□ -0.3
CRIM1-201ENST00000280527 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
CRIM1-201ENST00000280527 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
CRIM1-201ENST00000280527 KRTAP4-16G5E9R7 235 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-201ENST00000280527 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
CRIM1-201ENST00000280527 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
CRIM1-201ENST00000280527 NDUFAF8A1L188 74 aa13.14□□□□□ -0.31
CRIM1-201ENST00000280527 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
CRIM1-201ENST00000280527 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
CRIM1-201ENST00000280527 PANO1I0J062 215 aa13.11□□□□□ -0.31
CRIM1-201ENST00000280527 CFAP46Q8IYW2 2715 aa13.09□□□□□ -0.31
CRIM1-201ENST00000280527 AKAP13Q12802 2813 aa13.08□□□□□ -0.32
CRIM1-201ENST00000280527 LCE6AA0A183 80 aa13.08□□□□□ -0.32
CRIM1-201ENST00000280527 PLAC4Q8WY50 150 aa13.07□□□□□ -0.32
CRIM1-201ENST00000280527 CENPEQ02224 2701 aa13.04□□□□□ -0.32
CRIM1-201ENST00000280527 WDFY4Q6ZS81 3184 aa13.03□□□□□ -0.32
CRIM1-201ENST00000280527 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
CRIM1-201ENST00000280527 TRIOO75962 3097 aa13.01□□□□□ -0.33
CRIM1-201ENST00000280527 C20orf166-AS1Q96NR2 134 aa13□□□□□ -0.33
CRIM1-201ENST00000280527 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
CRIM1-201ENST00000280527 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
CRIM1-201ENST00000280527 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
CRIM1-201ENST00000280527 TRANK1O15050 2925 aa12.96□□□□□ -0.33
CRIM1-201ENST00000280527 TEX15Q9BXT5 2789 aa12.9□□□□□ -0.34
CRIM1-201ENST00000280527 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
CRIM1-201ENST00000280527 CELSR3Q9NYQ7 3312 aa12.86□□□□□ -0.35
CRIM1-201ENST00000280527 TEP1Q99973 2627 aaKnown RBP12.81□□□□□ -0.36
CRIM1-201ENST00000280527 A8MUU9 505 aa12.79□□□□□ -0.36
CRIM1-201ENST00000280527 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
CRIM1-201ENST00000280527 DNAH14Q0VDD8 3507 aa12.73□□□□□ -0.37
CRIM1-201ENST00000280527 VPS13AQ96RL7 3174 aa12.73□□□□□ -0.37
CRIM1-201ENST00000280527 UNC79Q9P2D8 2635 aa12.7□□□□□ -0.38
CRIM1-201ENST00000280527 KRTAP7-1Q8IUC3 87 aa12.68□□□□□ -0.38
CRIM1-201ENST00000280527 GCN1Q92616 2671 aaKnown RBP12.68□□□□□ -0.38
CRIM1-201ENST00000280527 C10orf95Q9H7T3 257 aa12.66□□□□□ -0.38
CRIM1-201ENST00000280527 ZNF292O60281 2723 aa12.66□□□□□ -0.38
CRIM1-201ENST00000280527 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
CRIM1-201ENST00000280527 STAB2Q8WWQ8 2551 aa12.66□□□□□ -0.38
CRIM1-201ENST00000280527 FREM2Q5SZK8 3169 aa12.65□□□□□ -0.39
CRIM1-201ENST00000280527 NOTCH1P46531 2555 aa12.65□□□□□ -0.39
CRIM1-201ENST00000280527 DSPP15924 2871 aaKnown RBP12.63□□□□□ -0.39
CRIM1-201ENST00000280527 FRYQ5TBA9 3013 aa12.6□□□□□ -0.39
CRIM1-201ENST00000280527 COL6A5A8TX70 2615 aa12.58□□□□□ -0.4
CRIM1-201ENST00000280527 VCANP13611 3396 aa12.58□□□□□ -0.4
CRIM1-201ENST00000280527 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
CRIM1-201ENST00000280527 KRTAP13-2Q52LG2 175 aa12.53□□□□□ -0.4
CRIM1-201ENST00000280527 NBEAL2Q6ZNJ1 2754 aa12.48□□□□□ -0.41
CRIM1-201ENST00000280527 LAMA1P25391 3075 aa12.47□□□□□ -0.41
CRIM1-201ENST00000280527 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.41
CRIM1-201ENST00000280527 TNP1P09430 55 aa12.45□□□□□ -0.42
CRIM1-201ENST00000280527 Q6ZRN7 208 aaPredicted RBP12.44□□□□□ -0.42
CRIM1-201ENST00000280527 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
CRIM1-201ENST00000280527 COL6A3P12111 3177 aa12.41□□□□□ -0.42
CRIM1-201ENST00000280527 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
CRIM1-201ENST00000280527 KALRNO60229 2985 aa12.31□□□□□ -0.44
CRIM1-201ENST00000280527 BOD1L1Q8NFC6 3051 aa12.24□□□□□ -0.45
CRIM1-201ENST00000280527 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
CRIM1-201ENST00000280527 ATMQ13315 3056 aa12.21□□□□□ -0.46
CRIM1-201ENST00000280527 H0YAA0 97 aa12.18□□□□□ -0.46
CRIM1-201ENST00000280527 BAHCC1Q9P281 2608 aa12.18□□□□□ -0.46
CRIM1-201ENST00000280527 LRBAP50851 2863 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms