RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 C1orf137Q5JT78 98 aa13.49□□□□□ -0.25
CCDC7-201ENST00000277657 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
CCDC7-201ENST00000277657 TRBV7-7A0A0K0K1E9 115 aa13.48□□□□□ -0.25
CCDC7-201ENST00000277657 IGLV8-61A0A075B6I0 122 aa13.46□□□□□ -0.25
CCDC7-201ENST00000277657 F8WEM9 126 aa13.46□□□□□ -0.25
CCDC7-201ENST00000277657 Q6Q795 121 aa13.46□□□□□ -0.25
CCDC7-201ENST00000277657 UBL5Q9BZL1 73 aa13.46□□□□□ -0.26
CCDC7-201ENST00000277657 ZNF861PO60384 105 aa13.45□□□□□ -0.26
CCDC7-201ENST00000277657 Q6JHZ5 121 aa13.45□□□□□ -0.26
CCDC7-201ENST00000277657 KMT2CQ8NEZ4 4911 aaKnown RBP13.45□□□□□ -0.26
CCDC7-201ENST00000277657 PKHD1P08F94 4074 aa13.44□□□□□ -0.26
CCDC7-201ENST00000277657 A0A1W2PNM2 257 aa13.42□□□□□ -0.26
CCDC7-201ENST00000277657 IMUPQ9GZP8 106 aa13.42□□□□□ -0.26
CCDC7-201ENST00000277657 SPRR4Q96PI1 79 aa13.42□□□□□ -0.26
CCDC7-201ENST00000277657 LRP1BQ9NZR2 4599 aa13.41□□□□□ -0.26
CCDC7-201ENST00000277657 A0A1B0GW54 56 aa13.4□□□□□ -0.26
CCDC7-201ENST00000277657 IGLV7-43P04211 117 aa13.4□□□□□ -0.26
CCDC7-201ENST00000277657 Q6ZVQ6 151 aa13.4□□□□□ -0.26
CCDC7-201ENST00000277657 Q8NBF4 154 aa13.4□□□□□ -0.26
CCDC7-201ENST00000277657 A0A1B0GVY2 172 aa13.39□□□□□ -0.27
CCDC7-201ENST00000277657 LINC00483Q53H64 154 aa13.39□□□□□ -0.27
CCDC7-201ENST00000277657 HAMPP81172 84 aa13.38□□□□□ -0.27
CCDC7-201ENST00000277657 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
CCDC7-201ENST00000277657 ZNF706Q9Y5V0 76 aaPredicted RBP13.38□□□□□ -0.27
CCDC7-201ENST00000277657 PCP4P48539 62 aa13.38□□□□□ -0.27
CCDC7-201ENST00000277657 ATP5EP2Q5VTU8 51 aa13.38□□□□□ -0.27
CCDC7-201ENST00000277657 IGKV3D-7A0A0C4DH55 119 aa13.36□□□□□ -0.27
CCDC7-201ENST00000277657 CRYGAP11844 174 aa13.33□□□□□ -0.28
CCDC7-201ENST00000277657 A0A0G2JQZ4 141 aa13.32□□□□□ -0.28
CCDC7-201ENST00000277657 DYNC1H1Q14204 4646 aaKnown RBP13.32□□□□□ -0.28
CCDC7-201ENST00000277657 NREPQ16612 68 aa13.28□□□□□ -0.28
CCDC7-201ENST00000277657 CXCL6P80162 114 aa13.27□□□□□ -0.28
CCDC7-201ENST00000277657 VPS13BQ7Z7G8 4022 aa13.26□□□□□ -0.29
CCDC7-201ENST00000277657 RYR3Q15413 4870 aa13.25□□□□□ -0.29
CCDC7-201ENST00000277657 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
CCDC7-201ENST00000277657 RPL37AP61513 92 aaKnown RBP13.23□□□□□ -0.29
CCDC7-201ENST00000277657 ANAPC11Q9NYG5 84 aa13.22□□□□□ -0.29
CCDC7-201ENST00000277657 FAM236AA0A1B0GUQ0 79 aa13.2□□□□□ -0.3
CCDC7-201ENST00000277657 FAM236BA0A1B0GV22 79 aa13.2□□□□□ -0.3
CCDC7-201ENST00000277657 HIST1H4AP62805 103 aaKnown RBP13.2□□□□□ -0.3
CCDC7-201ENST00000277657 C9orf153Q5TBE3 101 aa13.2□□□□□ -0.3
CCDC7-201ENST00000277657 A0A087WVE0 104 aa13.19□□□□□ -0.3
CCDC7-201ENST00000277657 A0A087WSZ3 146 aa13.17□□□□□ -0.3
CCDC7-201ENST00000277657 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
CCDC7-201ENST00000277657 BPY2O14599 106 aa13.15□□□□□ -0.3
CCDC7-201ENST00000277657 MOBPQ13875 183 aa13.15□□□□□ -0.3
CCDC7-201ENST00000277657 ANAPC13Q9BS18 74 aa13.11□□□□□ -0.31
CCDC7-201ENST00000277657 IGKV4-1P06312 121 aa13.06□□□□□ -0.32
CCDC7-201ENST00000277657 Q8N9L7 120 aa13.06□□□□□ -0.32
CCDC7-201ENST00000277657 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
CCDC7-201ENST00000277657 KRTAP1-4P0C5Y4 121 aa13.04□□□□□ -0.32
CCDC7-201ENST00000277657 DSCR10P59022 87 aa13.04□□□□□ -0.32
CCDC7-201ENST00000277657 SSBP3-AS1Q7Z2R9 100 aa13.03□□□□□ -0.32
CCDC7-201ENST00000277657 A0A087X002 238 aa13.02□□□□□ -0.32
CCDC7-201ENST00000277657 ATOX1O00244 68 aa13.02□□□□□ -0.32
CCDC7-201ENST00000277657 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.32
CCDC7-201ENST00000277657 LINC00472Q9H8W2 130 aa13.02□□□□□ -0.33
CCDC7-201ENST00000277657 SPINK6Q6UWN8 80 aa13□□□□□ -0.33
CCDC7-201ENST00000277657 HRCT1Q6UXD1 115 aa13□□□□□ -0.33
CCDC7-201ENST00000277657 KRTAP13-2Q52LG2 175 aa12.99□□□□□ -0.33
CCDC7-201ENST00000277657 FAT1Q14517 4588 aa12.98□□□□□ -0.33
CCDC7-201ENST00000277657 DEFB116Q30KQ4 102 aa12.98□□□□□ -0.33
CCDC7-201ENST00000277657 KRTAP10-4P60372 401 aaPredicted RBP12.97□□□□□ -0.33
CCDC7-201ENST00000277657 CD164Q04900 197 aa12.96□□□□□ -0.33
CCDC7-201ENST00000277657 SS18L2Q9UHA2 77 aa12.96□□□□□ -0.33
CCDC7-201ENST00000277657 K7EQZ3 153 aa12.95□□□□□ -0.34
CCDC7-201ENST00000277657 Q96NJ1 140 aa12.93□□□□□ -0.34
CCDC7-201ENST00000277657 PLA2G1BP04054 148 aaKnown RBP12.91□□□□□ -0.34
CCDC7-201ENST00000277657 J3KT08 172 aa12.9□□□□□ -0.34
CCDC7-201ENST00000277657 A8MWP4 228 aa12.87□□□□□ -0.35
CCDC7-201ENST00000277657 SERP2Q8N6R1 65 aa12.87□□□□□ -0.35
CCDC7-201ENST00000277657 CCDC179H3BU77 68 aa12.85□□□□□ -0.35
CCDC7-201ENST00000277657 COX7CP15954 63 aa12.85□□□□□ -0.35
CCDC7-201ENST00000277657 PRR15Q8IV56 129 aa12.84□□□□□ -0.35
CCDC7-201ENST00000277657 BIRC6Q9NR09 4857 aa12.82□□□□□ -0.36
CCDC7-201ENST00000277657 UQCRQO14949 82 aa12.82□□□□□ -0.36
CCDC7-201ENST00000277657 CDK2AP2O75956 126 aa12.82□□□□□ -0.36
CCDC7-201ENST00000277657 SMIM20Q8N5G0 67 aa12.82□□□□□ -0.36
CCDC7-201ENST00000277657 HSPG2P98160 4391 aa12.82□□□□□ -0.36
CCDC7-201ENST00000277657 HCG22E2RYF7 251 aa12.8□□□□□ -0.36
CCDC7-201ENST00000277657 ASB16-AS1Q495Z4 193 aa12.8□□□□□ -0.36
CCDC7-201ENST00000277657 EPPK1P58107 5090 aaKnown RBP12.8□□□□□ -0.36
CCDC7-201ENST00000277657 TYMSOSQ8TAI1 123 aa12.8□□□□□ -0.36
CCDC7-201ENST00000277657 PKHD1L1Q86WI1 4243 aa12.79□□□□□ -0.36
CCDC7-201ENST00000277657 TRAV7A0A075B6U4 112 aa12.79□□□□□ -0.36
CCDC7-201ENST00000277657 Q5XG85 94 aa12.79□□□□□ -0.36
CCDC7-201ENST00000277657 NDUFB1O75438 58 aa12.76□□□□□ -0.37
CCDC7-201ENST00000277657 RYR1P21817 5038 aa12.76□□□□□ -0.37
CCDC7-201ENST00000277657 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
CCDC7-201ENST00000277657 FAM229AH3BQW9 127 aa12.75□□□□□ -0.37
CCDC7-201ENST00000277657 OCR1Q9BZK8 76 aa12.74□□□□□ -0.37
CCDC7-201ENST00000277657 KRTAP29-1A8MX34 341 aaPredicted RBP12.72□□□□□ -0.37
CCDC7-201ENST00000277657 WFDC13Q8IUB5 93 aa12.7□□□□□ -0.38
CCDC7-201ENST00000277657 A0A1B0GVX0 72 aa12.69□□□□□ -0.38
CCDC7-201ENST00000277657 C4orf48Q5BLP8 95 aa12.69□□□□□ -0.38
CCDC7-201ENST00000277657 LIMD2Q9BT23 127 aa12.69□□□□□ -0.38
CCDC7-201ENST00000277657 MMP24-AS1A0A0U1RRL7 71 aa12.68□□□□□ -0.38
CCDC7-201ENST00000277657 SPINK1P00995 79 aa12.68□□□□□ -0.38
CCDC7-201ENST00000277657 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
CCDC7-201ENST00000277657 Q5VSD8 79 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms