RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RPL37P61927 97 aaKnown RBP10.75□□□□□ -0.69
COL5A3-201ENST00000264828 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
COL5A3-201ENST00000264828 PRRC2CQ9Y520 2896 aaKnown RBP10.72□□□□□ -0.69
COL5A3-201ENST00000264828 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
COL5A3-201ENST00000264828 M0QZ58 72 aa10.7□□□□□ -0.7
COL5A3-201ENST00000264828 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
COL5A3-201ENST00000264828 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
COL5A3-201ENST00000264828 Q5VSD8 79 aa10.65□□□□□ -0.7
COL5A3-201ENST00000264828 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
COL5A3-201ENST00000264828 KRTAP10-1P60331 282 aa10.64□□□□□ -0.71
COL5A3-201ENST00000264828 KRTAP10-2P60368 255 aa10.62□□□□□ -0.71
COL5A3-201ENST00000264828 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
COL5A3-201ENST00000264828 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
COL5A3-201ENST00000264828 Q6ZR54 194 aa10.6□□□□□ -0.71
COL5A3-201ENST00000264828 CEP350Q5VT06 3117 aa10.59□□□□□ -0.71
COL5A3-201ENST00000264828 PANO1I0J062 215 aa10.56□□□□□ -0.72
COL5A3-201ENST00000264828 LCE6AA0A183 80 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 HTTP42858 3142 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 EPG5Q9HCE0 2579 aa10.54□□□□□ -0.72
COL5A3-201ENST00000264828 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.73
COL5A3-201ENST00000264828 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
COL5A3-201ENST00000264828 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
COL5A3-201ENST00000264828 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
COL5A3-201ENST00000264828 A0A087X002 238 aa10.48□□□□□ -0.73
COL5A3-201ENST00000264828 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
COL5A3-201ENST00000264828 PLAC4Q8WY50 150 aa10.44□□□□□ -0.74
COL5A3-201ENST00000264828 ITPR3Q14573 2671 aa10.43□□□□□ -0.74
COL5A3-201ENST00000264828 PCNTO95613 3336 aa10.41□□□□□ -0.74
COL5A3-201ENST00000264828 A8MU10 97 aa10.39□□□□□ -0.75
COL5A3-201ENST00000264828 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
COL5A3-201ENST00000264828 ATRQ13535 2644 aa10.38□□□□□ -0.75
COL5A3-201ENST00000264828 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
COL5A3-201ENST00000264828 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
COL5A3-201ENST00000264828 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
COL5A3-201ENST00000264828 KRTAP25-1Q3LHN0 102 aa10.32□□□□□ -0.76
COL5A3-201ENST00000264828 A6NN06 94 aa10.31□□□□□ -0.76
COL5A3-201ENST00000264828 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
COL5A3-201ENST00000264828 MAST4O15021 2626 aa10.26□□□□□ -0.77
COL5A3-201ENST00000264828 TRANK1O15050 2925 aa10.25□□□□□ -0.77
COL5A3-201ENST00000264828 CFAP54Q96N23 3096 aa10.24□□□□□ -0.77
COL5A3-201ENST00000264828 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
COL5A3-201ENST00000264828 A8MUU9 505 aa10.2□□□□□ -0.78
COL5A3-201ENST00000264828 BRCA2P51587 3418 aa10.19□□□□□ -0.78
COL5A3-201ENST00000264828 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
COL5A3-201ENST00000264828 KRTAP7-1Q8IUC3 87 aa10.16□□□□□ -0.78
COL5A3-201ENST00000264828 NDUFAF8A1L188 74 aa10.14□□□□□ -0.79
COL5A3-201ENST00000264828 CHD6Q8TD26 2715 aa10.13□□□□□ -0.79
COL5A3-201ENST00000264828 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
COL5A3-201ENST00000264828 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
COL5A3-201ENST00000264828 LAMA3Q16787 3333 aa10.12□□□□□ -0.79
COL5A3-201ENST00000264828 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
COL5A3-201ENST00000264828 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
COL5A3-201ENST00000264828 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
COL5A3-201ENST00000264828 A0A0C4DFX4 3053 aa10.09□□□□□ -0.79
COL5A3-201ENST00000264828 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
COL5A3-201ENST00000264828 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
COL5A3-201ENST00000264828 RANBP2P49792 3224 aaKnown RBP10.06□□□□□ -0.8
COL5A3-201ENST00000264828 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
COL5A3-201ENST00000264828 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
COL5A3-201ENST00000264828 STAB1Q9NY15 2570 aa10□□□□□ -0.81
COL5A3-201ENST00000264828 GCN1Q92616 2671 aaKnown RBP9.99□□□□□ -0.81
COL5A3-201ENST00000264828 MGAQ8IWI9 3026 aa9.97□□□□□ -0.81
COL5A3-201ENST00000264828 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
COL5A3-201ENST00000264828 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.81
COL5A3-201ENST00000264828 C10orf95Q9H7T3 257 aa9.96□□□□□ -0.82
COL5A3-201ENST00000264828 CENPEQ02224 2701 aa9.93□□□□□ -0.82
COL5A3-201ENST00000264828 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
COL5A3-201ENST00000264828 TRIOO75962 3097 aa9.87□□□□□ -0.83
COL5A3-201ENST00000264828 TNP1P09430 55 aa9.87□□□□□ -0.83
COL5A3-201ENST00000264828 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
COL5A3-201ENST00000264828 UNC80Q8N2C7 3258 aa9.85□□□□□ -0.83
COL5A3-201ENST00000264828 LAMA2P24043 3122 aaKnown RBP9.83□□□□□ -0.84
COL5A3-201ENST00000264828 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
COL5A3-201ENST00000264828 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
COL5A3-201ENST00000264828 ZNF292O60281 2723 aa9.81□□□□□ -0.84
COL5A3-201ENST00000264828 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
COL5A3-201ENST00000264828 DNAH14Q0VDD8 3507 aa9.79□□□□□ -0.84
COL5A3-201ENST00000264828 TEP1Q99973 2627 aaKnown RBP9.77□□□□□ -0.85
COL5A3-201ENST00000264828 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
COL5A3-201ENST00000264828 FREM2Q5SZK8 3169 aa9.76□□□□□ -0.85
COL5A3-201ENST00000264828 NOTCH1P46531 2555 aa9.75□□□□□ -0.85
COL5A3-201ENST00000264828 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
COL5A3-201ENST00000264828 SPTBN5Q9NRC6 3674 aaKnown RBP9.74□□□□□ -0.85
COL5A3-201ENST00000264828 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
COL5A3-201ENST00000264828 COL6A5A8TX70 2615 aa9.67□□□□□ -0.86
COL5A3-201ENST00000264828 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
COL5A3-201ENST00000264828 CELSR3Q9NYQ7 3312 aa9.65□□□□□ -0.86
COL5A3-201ENST00000264828 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
COL5A3-201ENST00000264828 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
COL5A3-201ENST00000264828 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
COL5A3-201ENST00000264828 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
COL5A3-201ENST00000264828 COL6A3P12111 3177 aa9.6□□□□□ -0.87
COL5A3-201ENST00000264828 H0YAA0 97 aa9.58□□□□□ -0.88
COL5A3-201ENST00000264828 XP32Q5T750 250 aa9.53□□□□□ -0.88
COL5A3-201ENST00000264828 KALRNO60229 2985 aa9.52□□□□□ -0.89
COL5A3-201ENST00000264828 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
COL5A3-201ENST00000264828 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
COL5A3-201ENST00000264828 VPS13AQ96RL7 3174 aa9.5□□□□□ -0.89
COL5A3-201ENST00000264828 VCANP13611 3396 aa9.5□□□□□ -0.89
COL5A3-201ENST00000264828 BAHCC1Q9P281 2608 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms