RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MUC3AQ02505 3323 aa9.04□□□□□ -0.96
CUX2-201ENST00000261726 TNP2Q05952 138 aa9.02□□□□□ -0.96
CUX2-201ENST00000261726 ZNF292O60281 2723 aa9.01□□□□□ -0.97
CUX2-201ENST00000261726 DMXL1Q9Y485 3027 aa9.01□□□□□ -0.97
CUX2-201ENST00000261726 WIPF1O43516 503 aa9.01□□□□□ -0.97
CUX2-201ENST00000261726 BOD1L1Q8NFC6 3051 aa9□□□□□ -0.97
CUX2-201ENST00000261726 HRES1P13985 223 aa9□□□□□ -0.97
CUX2-201ENST00000261726 USP9YO00507 2555 aaPredicted RBP8.99□□□□□ -0.97
CUX2-201ENST00000261726 MTORP42345 2549 aa8.97□□□□□ -0.97
CUX2-201ENST00000261726 LOC400499M0QZD8 3231 aa8.97□□□□□ -0.97
CUX2-201ENST00000261726 A0A096LNT2 108 aa8.97□□□□□ -0.97
CUX2-201ENST00000261726 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
CUX2-201ENST00000261726 S4R3F8 94 aa8.96□□□□□ -0.98
CUX2-201ENST00000261726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
CUX2-201ENST00000261726 CR1P17927 2039 aa8.94□□□□□ -0.98
CUX2-201ENST00000261726 POLQO75417 2590 aa8.93□□□□□ -0.98
CUX2-201ENST00000261726 Q5VSD8 79 aa8.91□□□□□ -0.98
CUX2-201ENST00000261726 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
CUX2-201ENST00000261726 FRYQ5TBA9 3013 aa8.89□□□□□ -0.99
CUX2-201ENST00000261726 PRAC1Q96KF2 57 aa8.89□□□□□ -0.99
CUX2-201ENST00000261726 DSPP15924 2871 aaKnown RBP8.89□□□□□ -0.99
CUX2-201ENST00000261726 Q75L30 129 aa8.88□□□□□ -0.99
CUX2-201ENST00000261726 FLNBO75369 2602 aaKnown RBP8.88□□□□□ -0.99
CUX2-201ENST00000261726 DMXL2Q8TDJ6 3036 aa8.88□□□□□ -0.99
CUX2-201ENST00000261726 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
CUX2-201ENST00000261726 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
CUX2-201ENST00000261726 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
CUX2-201ENST00000261726 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
CUX2-201ENST00000261726 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
CUX2-201ENST00000261726 H3BS24 57 aa8.85□□□□□ -0.99
CUX2-201ENST00000261726 KRTAP1-3Q8IUG1 177 aa8.85□□□□□ -0.99
CUX2-201ENST00000261726 LAMA5O15230 3695 aa8.83□□□□□ -1
CUX2-201ENST00000261726 R4GN34 69 aa8.83□□□□□ -1
CUX2-201ENST00000261726 A0A0A0MQY5 61 aa8.82□□□□□ -1
CUX2-201ENST00000261726 MMP24-AS1A0A0U1RRL7 71 aa8.81□□□□□ -1
CUX2-201ENST00000261726 SPINK7P58062 85 aa8.81□□□□□ -1
CUX2-201ENST00000261726 ATMQ13315 3056 aa8.79□□□□□ -1
CUX2-201ENST00000261726 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
CUX2-201ENST00000261726 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
CUX2-201ENST00000261726 Q5W150 140 aa8.77□□□□□ -1.01
CUX2-201ENST00000261726 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
CUX2-201ENST00000261726 KRTAP1-1Q07627 177 aa8.76□□□□□ -1.01
CUX2-201ENST00000261726 Q5XG85 94 aa8.74□□□□□ -1.01
CUX2-201ENST00000261726 CFAP47Q6ZTR5 3102 aa8.73□□□□□ -1.01
CUX2-201ENST00000261726 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
CUX2-201ENST00000261726 LRBAP50851 2863 aa8.72□□□□□ -1.01
CUX2-201ENST00000261726 ADGRG4Q8IZF6 3080 aa8.72□□□□□ -1.01
CUX2-201ENST00000261726 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
CUX2-201ENST00000261726 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
CUX2-201ENST00000261726 Q5VV11 94 aa8.68□□□□□ -1.02
CUX2-201ENST00000261726 USP24Q9UPU5 2620 aa8.68□□□□□ -1.02
CUX2-201ENST00000261726 M0QZ58 72 aa8.67□□□□□ -1.02
CUX2-201ENST00000261726 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
CUX2-201ENST00000261726 Q8NDZ9 215 aa8.67□□□□□ -1.02
CUX2-201ENST00000261726 ROMO1P60602 79 aa8.64□□□□□ -1.03
CUX2-201ENST00000261726 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
CUX2-201ENST00000261726 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
CUX2-201ENST00000261726 RPL37P61927 97 aaKnown RBP8.63□□□□□ -1.03
CUX2-201ENST00000261726 RELNP78509 3460 aa8.62□□□□□ -1.03
CUX2-201ENST00000261726 DCHS1Q96JQ0 3298 aa8.62□□□□□ -1.03
CUX2-201ENST00000261726 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
CUX2-201ENST00000261726 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
CUX2-201ENST00000261726 SPRR1AP35321 89 aa8.59□□□□□ -1.03
CUX2-201ENST00000261726 MGAM2Q2M2H8 2515 aa8.58□□□□□ -1.04
CUX2-201ENST00000261726 BSNQ9UPA5 3926 aa8.58□□□□□ -1.04
CUX2-201ENST00000261726 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
CUX2-201ENST00000261726 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
CUX2-201ENST00000261726 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CUX2-201ENST00000261726 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
CUX2-201ENST00000261726 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
CUX2-201ENST00000261726 KALRNO60229 2985 aa8.52□□□□□ -1.05
CUX2-201ENST00000261726 OXTP01178 125 aa8.51□□□□□ -1.05
CUX2-201ENST00000261726 KRTAP10-1P60331 282 aa8.51□□□□□ -1.05
CUX2-201ENST00000261726 SPRR1BP22528 89 aa8.5□□□□□ -1.05
CUX2-201ENST00000261726 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
CUX2-201ENST00000261726 KRTAP1-5Q9BYS1 174 aa8.5□□□□□ -1.05
CUX2-201ENST00000261726 COL12A1Q99715 3063 aa8.49□□□□□ -1.05
CUX2-201ENST00000261726 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
CUX2-201ENST00000261726 FLNAP21333 2647 aaKnown RBP8.48□□□□□ -1.05
CUX2-201ENST00000261726 ATRQ13535 2644 aa8.47□□□□□ -1.05
CUX2-201ENST00000261726 CFAP46Q8IYW2 2715 aa8.47□□□□□ -1.05
CUX2-201ENST00000261726 ITPR3Q14573 2671 aa8.47□□□□□ -1.05
CUX2-201ENST00000261726 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
CUX2-201ENST00000261726 ZZEF1O43149 2961 aa8.44□□□□□ -1.06
CUX2-201ENST00000261726 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
CUX2-201ENST00000261726 Q6ZR54 194 aa8.44□□□□□ -1.06
CUX2-201ENST00000261726 CENPEQ02224 2701 aa8.43□□□□□ -1.06
CUX2-201ENST00000261726 TACC2O95359 2948 aa8.41□□□□□ -1.06
CUX2-201ENST00000261726 MAST4O15021 2626 aa8.4□□□□□ -1.07
CUX2-201ENST00000261726 MAP1AP78559 2803 aaPredicted RBP8.39□□□□□ -1.07
CUX2-201ENST00000261726 LCE6AA0A183 80 aa8.38□□□□□ -1.07
CUX2-201ENST00000261726 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
CUX2-201ENST00000261726 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
CUX2-201ENST00000261726 CSMD1Q96PZ7 3565 aa8.37□□□□□ -1.07
CUX2-201ENST00000261726 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
CUX2-201ENST00000261726 UTP20O75691 2785 aaKnown RBP8.33□□□□□ -1.08
CUX2-201ENST00000261726 PANO1I0J062 215 aa8.33□□□□□ -1.08
CUX2-201ENST00000261726 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
CUX2-201ENST00000261726 A0A087X002 238 aa8.3□□□□□ -1.08
CUX2-201ENST00000261726 CRYBG3Q68DQ2 2970 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms