RNA–Protein interactions for RNA: ENST00000242261.5

TWIST1-201, Transcript of twist family bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWIST1, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-201ENST00000242261 KMT2CQ8NEZ4 4911 aaKnown RBP17.18■□□□□ 0.34
TWIST1-201ENST00000242261 SMIM29Q86T20 159 aa17.17■□□□□ 0.34
TWIST1-201ENST00000242261 SPRR4Q96PI1 79 aa17.13■□□□□ 0.33
TWIST1-201ENST00000242261 LINC00483Q53H64 154 aa17.05■□□□□ 0.32
TWIST1-201ENST00000242261 LINC00846Q9NV44 126 aa17.05■□□□□ 0.32
TWIST1-201ENST00000242261 IGLV8-61A0A075B6I0 122 aa17.04■□□□□ 0.32
TWIST1-201ENST00000242261 SIGMAR1Q99720 223 aa17.04■□□□□ 0.32
TWIST1-201ENST00000242261 XGP55808 180 aa17.02■□□□□ 0.32
TWIST1-201ENST00000242261 Q6JHZ5 121 aa16.99■□□□□ 0.31
TWIST1-201ENST00000242261 LINC00643Q86TS7 51 aa16.99■□□□□ 0.31
TWIST1-201ENST00000242261 UBL5Q9BZL1 73 aa16.99■□□□□ 0.31
TWIST1-201ENST00000242261 IGFL1Q6UW32 110 aa16.97■□□□□ 0.31
TWIST1-201ENST00000242261 PKHD1P08F94 4074 aa16.96■□□□□ 0.31
TWIST1-201ENST00000242261 Q8NBF4 154 aa16.96■□□□□ 0.31
TWIST1-201ENST00000242261 RPL37AP61513 92 aaKnown RBP16.95■□□□□ 0.3
TWIST1-201ENST00000242261 A0A1B0GW54 56 aa16.94■□□□□ 0.3
TWIST1-201ENST00000242261 MT-ATP8P03928 68 aa16.94■□□□□ 0.3
TWIST1-201ENST00000242261 LRP1BQ9NZR2 4599 aa16.94■□□□□ 0.3
TWIST1-201ENST00000242261 A0A1W2PNM2 257 aa16.94■□□□□ 0.3
TWIST1-201ENST00000242261 C9orf153Q5TBE3 101 aa16.94■□□□□ 0.3
TWIST1-201ENST00000242261 IGLV9-49A0A0B4J1Y8 123 aa16.93■□□□□ 0.3
TWIST1-201ENST00000242261 DYNC1H1Q14204 4646 aaKnown RBP16.92■□□□□ 0.3
TWIST1-201ENST00000242261 SRRM2Q9UQ35 2752 aaKnown RBP16.89■□□□□ 0.29
TWIST1-201ENST00000242261 ANAPC11Q9NYG5 84 aa16.88■□□□□ 0.29
TWIST1-201ENST00000242261 SMR3BP02814 79 aaPredicted RBP16.87■□□□□ 0.29
TWIST1-201ENST00000242261 A0A0G2JQZ4 141 aa16.85■□□□□ 0.29
TWIST1-201ENST00000242261 CRYGAP11844 174 aa16.85■□□□□ 0.29
TWIST1-201ENST00000242261 Q6ZVQ6 151 aa16.85■□□□□ 0.29
TWIST1-201ENST00000242261 RYR3Q15413 4870 aa16.84■□□□□ 0.29
TWIST1-201ENST00000242261 MOBPQ13875 183 aa16.83■□□□□ 0.28
TWIST1-201ENST00000242261 ATP5EP2Q5VTU8 51 aa16.82■□□□□ 0.28
TWIST1-201ENST00000242261 NREPQ16612 68 aa16.81■□□□□ 0.28
TWIST1-201ENST00000242261 Q6Q795 121 aa16.78■□□□□ 0.28
TWIST1-201ENST00000242261 SPINK6Q6UWN8 80 aa16.78■□□□□ 0.28
TWIST1-201ENST00000242261 TRBV7-7A0A0K0K1E9 115 aa16.77■□□□□ 0.28
TWIST1-201ENST00000242261 IGKV3D-7A0A0C4DH55 119 aa16.76■□□□□ 0.27
TWIST1-201ENST00000242261 FAM229BQ4G0N7 80 aa16.75■□□□□ 0.27
TWIST1-201ENST00000242261 IMUPQ9GZP8 106 aa16.73■□□□□ 0.27
TWIST1-201ENST00000242261 A0A087WSZ3 146 aa16.72■□□□□ 0.27
TWIST1-201ENST00000242261 APOBP04114 4563 aaKnown RBP16.71■□□□□ 0.27
TWIST1-201ENST00000242261 CDK2AP2O75956 126 aa16.7■□□□□ 0.26
TWIST1-201ENST00000242261 CXCL6P80162 114 aa16.69■□□□□ 0.26
TWIST1-201ENST00000242261 SSBP3-AS1Q7Z2R9 100 aa16.68■□□□□ 0.26
TWIST1-201ENST00000242261 KRTAP1-4P0C5Y4 121 aa16.66■□□□□ 0.26
TWIST1-201ENST00000242261 SCGB1A1P11684 91 aa16.66■□□□□ 0.26
TWIST1-201ENST00000242261 FAM229AH3BQW9 127 aa16.65■□□□□ 0.26
TWIST1-201ENST00000242261 PLA2G1BP04054 148 aaKnown RBP16.65■□□□□ 0.26
TWIST1-201ENST00000242261 VPS13BQ7Z7G8 4022 aa16.64■□□□□ 0.26
TWIST1-201ENST00000242261 BPY2O14599 106 aa16.64■□□□□ 0.25
TWIST1-201ENST00000242261 A0A087X002 238 aa16.63■□□□□ 0.25
TWIST1-201ENST00000242261 HRCT1Q6UXD1 115 aa16.62■□□□□ 0.25
TWIST1-201ENST00000242261 KRTAP10-4P60372 401 aaPredicted RBP16.62■□□□□ 0.25
TWIST1-201ENST00000242261 HIST1H4AP62805 103 aaKnown RBP16.61■□□□□ 0.25
TWIST1-201ENST00000242261 KRTAP13-2Q52LG2 175 aa16.59■□□□□ 0.25
TWIST1-201ENST00000242261 SS18L2Q9UHA2 77 aa16.57■□□□□ 0.24
TWIST1-201ENST00000242261 CD164Q04900 197 aa16.56■□□□□ 0.24
TWIST1-201ENST00000242261 Q5VSD8 79 aa16.49■□□□□ 0.23
TWIST1-201ENST00000242261 TYMSOSQ8TAI1 123 aa16.49■□□□□ 0.23
TWIST1-201ENST00000242261 A0A087WVE0 104 aa16.48■□□□□ 0.23
TWIST1-201ENST00000242261 FAM236AA0A1B0GUQ0 79 aa16.46■□□□□ 0.23
TWIST1-201ENST00000242261 FAM236BA0A1B0GV22 79 aa16.46■□□□□ 0.23
TWIST1-201ENST00000242261 LINC00472Q9H8W2 130 aa16.44■□□□□ 0.22
TWIST1-201ENST00000242261 DEFB116Q30KQ4 102 aa16.43■□□□□ 0.22
TWIST1-201ENST00000242261 FAT1Q14517 4588 aa16.42■□□□□ 0.22
TWIST1-201ENST00000242261 J3KT08 172 aa16.41■□□□□ 0.22
TWIST1-201ENST00000242261 PRR26Q8N8Z3 221 aa16.41■□□□□ 0.22
TWIST1-201ENST00000242261 Q8N9L7 120 aa16.41■□□□□ 0.22
TWIST1-201ENST00000242261 DSCR10P59022 87 aa16.4■□□□□ 0.22
TWIST1-201ENST00000242261 C4orf48Q5BLP8 95 aa16.4■□□□□ 0.22
TWIST1-201ENST00000242261 IGKV4-1P06312 121 aa16.4■□□□□ 0.22
TWIST1-201ENST00000242261 PCP4P48539 62 aa16.34■□□□□ 0.21
TWIST1-201ENST00000242261 K7EQZ3 153 aa16.34■□□□□ 0.21
TWIST1-201ENST00000242261 Q96NJ1 140 aa16.33■□□□□ 0.2
TWIST1-201ENST00000242261 LIMD2Q9BT23 127 aa16.32■□□□□ 0.2
TWIST1-201ENST00000242261 RYR1P21817 5038 aa16.31■□□□□ 0.2
TWIST1-201ENST00000242261 A8MWP4 228 aa16.3■□□□□ 0.2
TWIST1-201ENST00000242261 HSPG2P98160 4391 aa16.3■□□□□ 0.2
TWIST1-201ENST00000242261 ASB16-AS1Q495Z4 193 aa16.3■□□□□ 0.2
TWIST1-201ENST00000242261 Q5XG85 94 aa16.29■□□□□ 0.2
TWIST1-201ENST00000242261 Q8N1X5 172 aa16.29■□□□□ 0.2
TWIST1-201ENST00000242261 LINC00304Q8N9R0 145 aa16.29■□□□□ 0.2
TWIST1-201ENST00000242261 ANAPC13Q9BS18 74 aa16.29■□□□□ 0.2
TWIST1-201ENST00000242261 ATOX1O00244 68 aa16.28■□□□□ 0.2
TWIST1-201ENST00000242261 SPINK1P00995 79 aa16.28■□□□□ 0.2
TWIST1-201ENST00000242261 NDUFB1O75438 58 aa16.27■□□□□ 0.2
TWIST1-201ENST00000242261 SPAG11AQ6PDA7 123 aa16.27■□□□□ 0.2
TWIST1-201ENST00000242261 LCE2DQ5TA82 110 aaPredicted RBP16.26■□□□□ 0.19
TWIST1-201ENST00000242261 EPPK1P58107 5090 aaKnown RBP16.24■□□□□ 0.19
TWIST1-201ENST00000242261 PRR15Q8IV56 129 aa16.24■□□□□ 0.19
TWIST1-201ENST00000242261 PKHD1L1Q86WI1 4243 aa16.19■□□□□ 0.18
TWIST1-201ENST00000242261 RPS29P62273 56 aaKnown RBP16.18■□□□□ 0.18
TWIST1-201ENST00000242261 HCG22E2RYF7 251 aa16.17■□□□□ 0.18
TWIST1-201ENST00000242261 KIAA1109Q2LD37 5005 aa16.15■□□□□ 0.18
TWIST1-201ENST00000242261 KRTAP17-1Q9BYP8 105 aa16.14■□□□□ 0.17
TWIST1-201ENST00000242261 C1orf195Q5TG92 126 aa16.12■□□□□ 0.17
TWIST1-201ENST00000242261 A0A1B0GVX0 72 aa16.11■□□□□ 0.17
TWIST1-201ENST00000242261 SMIM20Q8N5G0 67 aa16.1■□□□□ 0.17
TWIST1-201ENST00000242261 IGHV6-1A0A0B4J1U7 121 aa16.08■□□□□ 0.17
TWIST1-201ENST00000242261 WFDC13Q8IUB5 93 aa16.08■□□□□ 0.16
TWIST1-201ENST00000242261 CASC2Q6XLA1 102 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms