RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
PRDM2-201ENST00000235372 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
PRDM2-201ENST00000235372 LINC00612Q8N6U2 182 aa4.86□□□□□ -1.63
PRDM2-201ENST00000235372 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
PRDM2-201ENST00000235372 CHD6Q8TD26 2715 aa4.84□□□□□ -1.63
PRDM2-201ENST00000235372 C10orf142B7Z368 130 aa4.84□□□□□ -1.63
PRDM2-201ENST00000235372 ZFHX4Q86UP3 3567 aa4.84□□□□□ -1.63
PRDM2-201ENST00000235372 PRR34Q9NV39 138 aa4.84□□□□□ -1.63
PRDM2-201ENST00000235372 HELZ2Q9BYK8 2649 aaKnown RBP4.84□□□□□ -1.63
PRDM2-201ENST00000235372 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
PRDM2-201ENST00000235372 BAHCC1Q9P281 2608 aa4.84□□□□□ -1.64
PRDM2-201ENST00000235372 C19orf73Q9NVV2 129 aa4.83□□□□□ -1.64
PRDM2-201ENST00000235372 LITAFQ99732 161 aa4.83□□□□□ -1.64
PRDM2-201ENST00000235372 COL6A5A8TX70 2615 aa4.83□□□□□ -1.64
PRDM2-201ENST00000235372 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
PRDM2-201ENST00000235372 ATRQ13535 2644 aa4.82□□□□□ -1.64
PRDM2-201ENST00000235372 ITPR2Q14571 2701 aa4.81□□□□□ -1.64
PRDM2-201ENST00000235372 NOTCH1P46531 2555 aa4.8□□□□□ -1.64
PRDM2-201ENST00000235372 PRUNE2Q8WUY3 3088 aa4.8□□□□□ -1.64
PRDM2-201ENST00000235372 UNC79Q9P2D8 2635 aa4.8□□□□□ -1.64
PRDM2-201ENST00000235372 ASPMQ8IZT6 3477 aa4.79□□□□□ -1.64
PRDM2-201ENST00000235372 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
PRDM2-201ENST00000235372 CELSR3Q9NYQ7 3312 aa4.78□□□□□ -1.64
PRDM2-201ENST00000235372 FAM229BQ4G0N7 80 aa4.78□□□□□ -1.64
PRDM2-201ENST00000235372 Q75L30 129 aa4.77□□□□□ -1.65
PRDM2-201ENST00000235372 Q5VSD8 79 aa4.75□□□□□ -1.65
PRDM2-201ENST00000235372 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
PRDM2-201ENST00000235372 WDFY4Q6ZS81 3184 aa4.75□□□□□ -1.65
PRDM2-201ENST00000235372 TNP2Q05952 138 aa4.75□□□□□ -1.65
PRDM2-201ENST00000235372 CASC10Q5T4H9 136 aa4.74□□□□□ -1.65
PRDM2-201ENST00000235372 M0QZ58 72 aa4.74□□□□□ -1.65
PRDM2-201ENST00000235372 ROMO1P60602 79 aa4.74□□□□□ -1.65
PRDM2-201ENST00000235372 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
PRDM2-201ENST00000235372 GIG44P09565 113 aaPredicted RBP4.73□□□□□ -1.65
PRDM2-201ENST00000235372 APCP25054 2843 aa4.73□□□□□ -1.65
PRDM2-201ENST00000235372 FLNBO75369 2602 aaKnown RBP4.73□□□□□ -1.65
PRDM2-201ENST00000235372 A0A0C4DFX4 3053 aa4.71□□□□□ -1.66
PRDM2-201ENST00000235372 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
PRDM2-201ENST00000235372 COL6A3P12111 3177 aa4.7□□□□□ -1.66
PRDM2-201ENST00000235372 EIF4EBP3O60516 100 aaPredicted RBP4.69□□□□□ -1.66
PRDM2-201ENST00000235372 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
PRDM2-201ENST00000235372 OCR1Q9BZK8 76 aa4.68□□□□□ -1.66
PRDM2-201ENST00000235372 KRTAP10-3P60369 221 aa4.68□□□□□ -1.66
PRDM2-201ENST00000235372 OXTP01178 125 aa4.67□□□□□ -1.66
PRDM2-201ENST00000235372 SETXQ7Z333 2677 aaKnown RBP4.67□□□□□ -1.66
PRDM2-201ENST00000235372 VPS13AQ96RL7 3174 aa4.67□□□□□ -1.66
PRDM2-201ENST00000235372 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
PRDM2-201ENST00000235372 TEP1Q99973 2627 aaKnown RBP4.66□□□□□ -1.66
PRDM2-201ENST00000235372 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.66
PRDM2-201ENST00000235372 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.67
PRDM2-201ENST00000235372 Q5W150 140 aa4.65□□□□□ -1.67
PRDM2-201ENST00000235372 STAB2Q8WWQ8 2551 aa4.64□□□□□ -1.67
PRDM2-201ENST00000235372 TRIOO75962 3097 aa4.64□□□□□ -1.67
PRDM2-201ENST00000235372 PLAC8Q9NZF1 115 aa4.64□□□□□ -1.67
PRDM2-201ENST00000235372 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
PRDM2-201ENST00000235372 GCN1Q92616 2671 aaKnown RBP4.62□□□□□ -1.67
PRDM2-201ENST00000235372 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
PRDM2-201ENST00000235372 FREM2Q5SZK8 3169 aa4.61□□□□□ -1.67
PRDM2-201ENST00000235372 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
PRDM2-201ENST00000235372 ASH1LQ9NR48 2969 aaKnown RBP4.61□□□□□ -1.67
PRDM2-201ENST00000235372 LAMA5O15230 3695 aa4.6□□□□□ -1.67
PRDM2-201ENST00000235372 FRYQ5TBA9 3013 aa4.6□□□□□ -1.67
PRDM2-201ENST00000235372 FP248Q71RG6 208 aaPredicted RBP4.59□□□□□ -1.67
PRDM2-201ENST00000235372 SPENQ96T58 3664 aaKnown RBP4.59□□□□□ -1.67
PRDM2-201ENST00000235372 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
PRDM2-201ENST00000235372 ZFHX3Q15911 3703 aa4.58□□□□□ -1.68
PRDM2-201ENST00000235372 ZNF292O60281 2723 aa4.56□□□□□ -1.68
PRDM2-201ENST00000235372 SPATA8Q6RVD6 105 aa4.56□□□□□ -1.68
PRDM2-201ENST00000235372 DSPP15924 2871 aaKnown RBP4.56□□□□□ -1.68
PRDM2-201ENST00000235372 MUC3AQ02505 3323 aa4.55□□□□□ -1.68
PRDM2-201ENST00000235372 CRYBG3Q68DQ2 2970 aa4.55□□□□□ -1.68
PRDM2-201ENST00000235372 Q5VV11 94 aa4.55□□□□□ -1.68
PRDM2-201ENST00000235372 Q8NDZ9 215 aa4.55□□□□□ -1.68
PRDM2-201ENST00000235372 FRYLO94915 3013 aa4.55□□□□□ -1.68
PRDM2-201ENST00000235372 MGAQ8IWI9 3026 aa4.54□□□□□ -1.68
PRDM2-201ENST00000235372 HTTP42858 3142 aa4.54□□□□□ -1.68
PRDM2-201ENST00000235372 A0A096LNT2 108 aa4.52□□□□□ -1.69
PRDM2-201ENST00000235372 UTP20O75691 2785 aaKnown RBP4.52□□□□□ -1.69
PRDM2-201ENST00000235372 LAMA1P25391 3075 aa4.51□□□□□ -1.69
PRDM2-201ENST00000235372 ASB16-AS1Q495Z4 193 aa4.51□□□□□ -1.69
PRDM2-201ENST00000235372 LCE6AA0A183 80 aa4.5□□□□□ -1.69
PRDM2-201ENST00000235372 PANO1I0J062 215 aa4.5□□□□□ -1.69
PRDM2-201ENST00000235372 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
PRDM2-201ENST00000235372 TRANK1O15050 2925 aa4.5□□□□□ -1.69
PRDM2-201ENST00000235372 SPRR1BP22528 89 aa4.5□□□□□ -1.69
PRDM2-201ENST00000235372 IGSF10Q6WRI0 2623 aa4.49□□□□□ -1.69
PRDM2-201ENST00000235372 DCHS1Q96JQ0 3298 aa4.49□□□□□ -1.69
PRDM2-201ENST00000235372 A8MUU9 505 aa4.48□□□□□ -1.69
PRDM2-201ENST00000235372 LRBAP50851 2863 aa4.48□□□□□ -1.69
PRDM2-201ENST00000235372 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
PRDM2-201ENST00000235372 CHD7Q9P2D1 2997 aa4.48□□□□□ -1.69
PRDM2-201ENST00000235372 Q6ZR54 194 aa4.47□□□□□ -1.69
PRDM2-201ENST00000235372 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
PRDM2-201ENST00000235372 RELNP78509 3460 aa4.46□□□□□ -1.7
PRDM2-201ENST00000235372 SPRR1AP35321 89 aa4.46□□□□□ -1.7
PRDM2-201ENST00000235372 TNP1P09430 55 aa4.46□□□□□ -1.7
PRDM2-201ENST00000235372 KALRNO60229 2985 aa4.46□□□□□ -1.7
PRDM2-201ENST00000235372 NBPF19A0A087WUL8 3843 aa4.45□□□□□ -1.7
PRDM2-201ENST00000235372 Q5XG85 94 aa4.45□□□□□ -1.7
PRDM2-201ENST00000235372 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms