RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
NEK4-201ENST00000233027 HECTD1Q9ULT8 2610 aa8.05□□□□□ -1.12
NEK4-201ENST00000233027 HTTP42858 3142 aa8.03□□□□□ -1.12
NEK4-201ENST00000233027 EPG5Q9HCE0 2579 aa8.03□□□□□ -1.12
NEK4-201ENST00000233027 FLNAP21333 2647 aaKnown RBP8.02□□□□□ -1.12
NEK4-201ENST00000233027 H3BS24 57 aa8□□□□□ -1.13
NEK4-201ENST00000233027 MGAM2Q2M2H8 2515 aa8□□□□□ -1.13
NEK4-201ENST00000233027 LINC00483Q53H64 154 aa8□□□□□ -1.13
NEK4-201ENST00000233027 CHD9Q3L8U1 2897 aa7.98□□□□□ -1.13
NEK4-201ENST00000233027 M0R2T5 61 aa7.98□□□□□ -1.13
NEK4-201ENST00000233027 ITPR3Q14573 2671 aa7.97□□□□□ -1.13
NEK4-201ENST00000233027 PANO1I0J062 215 aa7.93□□□□□ -1.14
NEK4-201ENST00000233027 LAMA3Q16787 3333 aa7.93□□□□□ -1.14
NEK4-201ENST00000233027 KRTAP10-2P60368 255 aa7.93□□□□□ -1.14
NEK4-201ENST00000233027 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
NEK4-201ENST00000233027 LAMA2P24043 3122 aaKnown RBP7.92□□□□□ -1.14
NEK4-201ENST00000233027 BRCA2P51587 3418 aa7.91□□□□□ -1.14
NEK4-201ENST00000233027 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
NEK4-201ENST00000233027 R4GN34 69 aa7.9□□□□□ -1.15
NEK4-201ENST00000233027 RANBP2P49792 3224 aaKnown RBP7.89□□□□□ -1.15
NEK4-201ENST00000233027 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
NEK4-201ENST00000233027 Q6ZR54 194 aa7.89□□□□□ -1.15
NEK4-201ENST00000233027 ATRQ13535 2644 aa7.88□□□□□ -1.15
NEK4-201ENST00000233027 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
NEK4-201ENST00000233027 ROMO1P60602 79 aa7.87□□□□□ -1.15
NEK4-201ENST00000233027 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
NEK4-201ENST00000233027 TRIOO75962 3097 aa7.87□□□□□ -1.15
NEK4-201ENST00000233027 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
NEK4-201ENST00000233027 MGAQ8IWI9 3026 aa7.86□□□□□ -1.15
NEK4-201ENST00000233027 A0A087X002 238 aa7.84□□□□□ -1.15
NEK4-201ENST00000233027 Q5VSD8 79 aa7.84□□□□□ -1.15
NEK4-201ENST00000233027 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
NEK4-201ENST00000233027 FLNBO75369 2602 aaKnown RBP7.82□□□□□ -1.16
NEK4-201ENST00000233027 XIRP2A4UGR9 3374 aa7.81□□□□□ -1.16
NEK4-201ENST00000233027 UNC80Q8N2C7 3258 aa7.81□□□□□ -1.16
NEK4-201ENST00000233027 M0QZ58 72 aa7.8□□□□□ -1.16
NEK4-201ENST00000233027 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
NEK4-201ENST00000233027 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
NEK4-201ENST00000233027 CELSR3Q9NYQ7 3312 aa7.76□□□□□ -1.17
NEK4-201ENST00000233027 TRANK1O15050 2925 aa7.75□□□□□ -1.17
NEK4-201ENST00000233027 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
NEK4-201ENST00000233027 CDH23Q9H251 3354 aa7.75□□□□□ -1.17
NEK4-201ENST00000233027 WDFY4Q6ZS81 3184 aa7.75□□□□□ -1.17
NEK4-201ENST00000233027 CFAP46Q8IYW2 2715 aa7.75□□□□□ -1.17
NEK4-201ENST00000233027 MAST4O15021 2626 aa7.74□□□□□ -1.17
NEK4-201ENST00000233027 CHD6Q8TD26 2715 aa7.74□□□□□ -1.17
NEK4-201ENST00000233027 PRUNE2Q8WUY3 3088 aa7.74□□□□□ -1.17
NEK4-201ENST00000233027 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
NEK4-201ENST00000233027 DNAH14Q0VDD8 3507 aa7.73□□□□□ -1.17
NEK4-201ENST00000233027 HELZ2Q9BYK8 2649 aaKnown RBP7.71□□□□□ -1.18
NEK4-201ENST00000233027 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
NEK4-201ENST00000233027 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
NEK4-201ENST00000233027 FREM2Q5SZK8 3169 aa7.68□□□□□ -1.18
NEK4-201ENST00000233027 LCE6AA0A183 80 aa7.68□□□□□ -1.18
NEK4-201ENST00000233027 A8MU10 97 aa7.67□□□□□ -1.18
NEK4-201ENST00000233027 CENPEQ02224 2701 aa7.66□□□□□ -1.18
NEK4-201ENST00000233027 A6NN06 94 aa7.65□□□□□ -1.18
NEK4-201ENST00000233027 GCN1Q92616 2671 aaKnown RBP7.64□□□□□ -1.19
NEK4-201ENST00000233027 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
NEK4-201ENST00000233027 FRYQ5TBA9 3013 aa7.64□□□□□ -1.19
NEK4-201ENST00000233027 VPS13AQ96RL7 3174 aa7.62□□□□□ -1.19
NEK4-201ENST00000233027 TEX15Q9BXT5 2789 aa7.59□□□□□ -1.19
NEK4-201ENST00000233027 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
NEK4-201ENST00000233027 Q6ZRN7 208 aaPredicted RBP7.58□□□□□ -1.2
NEK4-201ENST00000233027 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
NEK4-201ENST00000233027 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
NEK4-201ENST00000233027 UNC79Q9P2D8 2635 aa7.56□□□□□ -1.2
NEK4-201ENST00000233027 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
NEK4-201ENST00000233027 VCANP13611 3396 aa7.54□□□□□ -1.2
NEK4-201ENST00000233027 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
NEK4-201ENST00000233027 SZT2Q5T011 3432 aa7.52□□□□□ -1.21
NEK4-201ENST00000233027 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
NEK4-201ENST00000233027 COL6A3P12111 3177 aa7.5□□□□□ -1.21
NEK4-201ENST00000233027 KALRNO60229 2985 aa7.5□□□□□ -1.21
NEK4-201ENST00000233027 A8MUU9 505 aa7.48□□□□□ -1.21
NEK4-201ENST00000233027 LAMA1P25391 3075 aa7.47□□□□□ -1.21
NEK4-201ENST00000233027 ZNF292O60281 2723 aa7.47□□□□□ -1.21
NEK4-201ENST00000233027 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
NEK4-201ENST00000233027 DSPP15924 2871 aaKnown RBP7.45□□□□□ -1.22
NEK4-201ENST00000233027 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
NEK4-201ENST00000233027 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
NEK4-201ENST00000233027 TEP1Q99973 2627 aaKnown RBP7.42□□□□□ -1.22
NEK4-201ENST00000233027 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
NEK4-201ENST00000233027 MAP1AP78559 2803 aaPredicted RBP7.41□□□□□ -1.22
NEK4-201ENST00000233027 SETXQ7Z333 2677 aaKnown RBP7.4□□□□□ -1.22
NEK4-201ENST00000233027 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.22
NEK4-201ENST00000233027 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
NEK4-201ENST00000233027 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
NEK4-201ENST00000233027 LRBAP50851 2863 aa7.36□□□□□ -1.23
NEK4-201ENST00000233027 NOTCH1P46531 2555 aa7.35□□□□□ -1.23
NEK4-201ENST00000233027 REV3LO60673 3130 aa7.33□□□□□ -1.24
NEK4-201ENST00000233027 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
NEK4-201ENST00000233027 IGSF10Q6WRI0 2623 aa7.31□□□□□ -1.24
NEK4-201ENST00000233027 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
NEK4-201ENST00000233027 BOD1L1Q8NFC6 3051 aa7.3□□□□□ -1.24
NEK4-201ENST00000233027 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
NEK4-201ENST00000233027 FRYLO94915 3013 aa7.27□□□□□ -1.25
NEK4-201ENST00000233027 SPTBN5Q9NRC6 3674 aaKnown RBP7.27□□□□□ -1.25
NEK4-201ENST00000233027 ATMQ13315 3056 aa7.26□□□□□ -1.25
NEK4-201ENST00000233027 ADGRG4Q8IZF6 3080 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms