RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 P01802 115 aa11.76□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Chchd5Q9CQP3 110 aa11.76□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Shisal2bQ9D1Y9 158 aa11.76□□□□□ -0.53
Ldb3-208ENSMUST00000228044 P01727 129 aa11.75□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Ifna11Q61716 190 aa11.75□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Olfr509Q8VF20 321 aa11.75□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Olfr477Q8VGI6 310 aa11.75□□□□□ -0.53
Ldb3-208ENSMUST00000228044 BC067074F6RXI4 2391 aa11.75□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trav16A0A075B653 116 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trav7-4A0A075B6C1 113 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trav21-dv12A0A075B6C4 109 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm21983D6RFS9 131 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Erdr1J3QMM0 206 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Lgals1P16045 135 aaKnown RBP11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Adam8Q05910 826 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 AW146154Q3TPQ7 468 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm16686Q3UMN9 131 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Znf48Q3US17 591 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trav7d-4Q5R1H9 113 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trp53rkaQ5U452 244 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Prss3Q792Z0 246 aaKnown RBP11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Lypd1Q8BLC3 141 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tp53rkQ99PW4 244 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Btf3l4Q9CQH7 158 aaKnown RBP11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hyls1Q9CXX0 307 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tmem239Q9DA47 151 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Ighv6-3A0A075B5T2 118 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Ighv1-53A0A075B5W3 117 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tcrg-C2A0A075B5Z2 167 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Trav6-4A0A075B6B4 115 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Ccdc71lE9Q4T4 218 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm26661M0QWV4 156 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 P01812 117 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 P01853 167 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tmem91Q8C581 172 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Obox8V9GWY9 217 aa11.74□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Zfp979A2A799 407 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hist1h2bmP10854 126 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Btf3Q64152 204 aaKnown RBP11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hist1h2bhQ64478 126 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hist2h2bbQ64525 126 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Il31Q6EAL8 163 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Nf1Q04690 2841 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Myo18bE9PV66 2605 aa11.73□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm5878E9PUB3 99 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm21834J3QN05 151 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gp9O88186 177 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Twist1P26687 206 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Lyzl1Q9CPX3 148 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Hoxa5P09021 270 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Olfr1537P34983 314 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm5941Q497P9 117 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Smim7Q5RKS2 75 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Odf3l1Q810P2 275 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Stxbp6Q8R3T5 210 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Stard4Q99JV5 224 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 TirapQ99JY1 241 aa11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Cep192E9Q4Y4 2514 aaKnown RBP11.72□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Nav3Q80TN7 2359 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tenm3Q9WTS6 2715 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tmem141A2AJB2 108 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Olfr1116E9PXB8 307 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Olfr1185-ps1F6XP16 303 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm28051J3QMA2 81 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Saa3P04918 122 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 PigyP0C1P0 71 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Slc17a2Q5SZA1 478 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 6030452D12RikQ8CD33 222 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Cotl1Q9CQI6 142 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Rchy1Q9CR50 261 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Tnfrsf13cQ9D8D0 175 aa11.71□□□□□ -0.53
Ldb3-208ENSMUST00000228044 Gm9964E9Q9S5 144 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 TcapO70548 167 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Pygo2Q80V76 405 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Olfr982Q8VGB3 321 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Ighv1-80A0A075B5Y3 117 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Gm12169F2Z474 250 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 MsmbO08540 113 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Ly86O88188 162 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Fbln7Q501P1 440 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Mrps10Q80ZK0 160 aaKnown RBP11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Ifi27Q8C6G0 260 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Trpt1Q8K3A2 249 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Olfr481Q8VGI5 312 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Dpm3Q9D1Q4 92 aa11.7□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Sorl1O88307 2215 aaKnown RBP11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Igkv4-57-1A0A075B5M4 119 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Tcrg-V6A0A075B5Y8 134 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Trav7n-4A0A075B620 113 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Ren1P06281 402 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Cdx1P18111 268 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Psmg3Q9CZH3 122 aa11.69□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Olfr1293-psA0A1L1SVB5 326 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Zfp825A0A1Y7VK00 292 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Gm21874J3QNZ6 232 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Znf239P24399 201 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Plscr4P58196 326 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Olfr1380Q7TQT5 311 aa11.68□□□□□ -0.54
Ldb3-208ENSMUST00000228044 Rnf24Q8BGI1 148 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms