RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Rpp25lQ99JH1 163 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Tmem190Q9D2E9 166 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm26938S4R185 226 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm2564F6Z9S8 108 aa12.77□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ccl19O70460 108 aa12.77□□□□□ -0.36
Clcn3-203ENSMUST00000093490 P18528 98 aa12.77□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Id3P41133 119 aa12.77□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Plxna2P70207 1894 aa12.77□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Pde6hP61249 83 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tomm40Q9QYA2 361 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Igkv5-37A0A140T8N4 115 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 H2-DMb1P35737 261 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ccl21aP84444 133 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ccl21bP86792 133 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ccl21cP86793 133 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tspan13Q9D8C2 204 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tmem131O70472 1877 aa12.77□□□□□ -0.37
Clcn3-203ENSMUST00000093490 P01741 114 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Psg25Q497W1 475 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Q4KKZ1 196 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Igfbpl1Q80W15 270 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Mrpl32Q9DCI9 187 aaKnown RBP12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 C730034F03RikQ8BGL5 111 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 AY761184Q9D848 116 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm20379A0A087WR34 119 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Scgb1b2O35176 93 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Cks1bP61025 79 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Jsrp1Q3MI48 332 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Olfr211Q8VGH2 309 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 PtprfA2A8L5 1898 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gng7Q61016 68 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Supt4h1bQ9Z199 117 aa12.76□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Lynx1P0DP60 116 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 H1fxQ80ZM5 188 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm10020E9QAZ2 204 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Defa7P50705 93 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Chac1Q8R3J5 223 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ssbp2Q9CYZ8 361 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Rpl15Q9CZM2 204 aaKnown RBP12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Eml5Q8BQM8 1977 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gpx1P11352 201 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Morn3Q8C5T4 241 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm4763Q8CFJ5 196 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Trbv30A0A0B4J1P1 111 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm7075D3Z497 112 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Rnf114Q9ET26 229 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm867A0A1W2P7T4 151 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Defb26Q30KN7 186 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Znhit3Q9CQK1 151 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 3110018I06RikQ9CXS0 120 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Dpm2Q9Z324 84 aa12.75□□□□□ -0.37
Clcn3-203ENSMUST00000093490 MpdzQ8VBX6 2055 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Cacna1eQ61290 2272 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 P01736 120 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tdgf1P51865 171 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ypel3P61237 119 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Dennd4aE9Q8V6 1869 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Fbxl7Q5BJ29 491 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Fam110aQ8R184 296 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Immp1lQ9CQU8 166 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 1500009C09RikD3YYW9 81 aa12.74□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm29666A0A087WQ99 126 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 H2al1jA2BFR3 109 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Foxf1Q61080 378 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Cysltr1Q99JA4 352 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm6871L7N248 545 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm21370Q3T9V6 190 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Pradc1Q9D9N8 188 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tcrg-C1A0A075B5Z0 172 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tcrg-C3L7N479 172 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm16686Q3UMN9 131 aa12.73□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm20517G3UVU6 152 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ifi27l2aQ8R412 90 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Ighv5-6A0A075B5Q0 117 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Trav7-1A0A0G2JEV5 112 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 NdpP48744 131 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 PdpnQ62011 172 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Pear1Q8VIK5 1034 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Tmem200bD3Z0P8 284 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 P0C1Z5 52 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Wipf2Q6PEV3 440 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 SNORCQ9CXL7 121 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm9970F6ZED4 185 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Mbd6Q3TY92 1003 aa12.72□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Gm12845A0A0N4SUM5 588 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 COA4Q8BT51 87 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 TirapQ99JY1 241 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Atp6v0e1Q9CQD8 81 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Cacna1hO88427 2365 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Trbv31A0A075B5J5 111 aa12.71□□□□□ -0.37
Clcn3-203ENSMUST00000093490 Olfr317Q5NCD6 327 aa12.71□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Gkn1Q9CR36 201 aa12.71□□□□□ -0.38
Clcn3-203ENSMUST00000093490 IappP12968 93 aa12.71□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Defa16P50714 93 aa12.71□□□□□ -0.38
Clcn3-203ENSMUST00000093490 PifoQ9D9W1 207 aa12.71□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Defa-rs2P17534 91 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Trav6d-7A0A075B6B0 112 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Igkv4-71A0A0G2JEH0 117 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Sfta2E9PXB6 77 aa12.7□□□□□ -0.38
Clcn3-203ENSMUST00000093490 Hbb-b2P02089 147 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms