RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 MRPL34Q9BQ48 92 aaKnown RBP3.13□□□□□ -1.91
HMGN2P47-201ENST00000559378 STATHP02808 62 aa3.12□□□□□ -1.91
HMGN2P47-201ENST00000559378 DEFB131AP59861 70 aa3.11□□□□□ -1.91
HMGN2P47-201ENST00000559378 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
HMGN2P47-201ENST00000559378 KAAG1Q9UBP8 84 aa3.11□□□□□ -1.91
HMGN2P47-201ENST00000559378 ICE1Q9Y2F5 2266 aa3.1□□□□□ -1.91
HMGN2P47-201ENST00000559378 MMP24-AS1A0A0U1RRL7 71 aa3.1□□□□□ -1.91
HMGN2P47-201ENST00000559378 COL6A6A6NMZ7 2263 aa3.09□□□□□ -1.91
HMGN2P47-201ENST00000559378 NAV3Q8IVL0 2385 aa3.09□□□□□ -1.91
HMGN2P47-201ENST00000559378 ALMS1Q8TCU4 4167 aa3.09□□□□□ -1.91
HMGN2P47-201ENST00000559378 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
HMGN2P47-201ENST00000559378 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
HMGN2P47-201ENST00000559378 Q6ZSA8 131 aa3.08□□□□□ -1.92
HMGN2P47-201ENST00000559378 A8MTW9 85 aa3.07□□□□□ -1.92
HMGN2P47-201ENST00000559378 UBE2DNLQ8IWF7 75 aa3.07□□□□□ -1.92
HMGN2P47-201ENST00000559378 USMG5Q96IX5 58 aa3.07□□□□□ -1.92
HMGN2P47-201ENST00000559378 KRTAP9-8Q9BYQ0 159 aa3.07□□□□□ -1.92
HMGN2P47-201ENST00000559378 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
HMGN2P47-201ENST00000559378 MAPK1IP1LQ8NDC0 245 aa3.06□□□□□ -1.92
HMGN2P47-201ENST00000559378 CACNA1BQ00975 2339 aa3.05□□□□□ -1.92
HMGN2P47-201ENST00000559378 IGKV2D-30A0A075B6S6 120 aa3.05□□□□□ -1.92
HMGN2P47-201ENST00000559378 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
HMGN2P47-201ENST00000559378 RPL37P61927 97 aaKnown RBP3.04□□□□□ -1.92
HMGN2P47-201ENST00000559378 SPINK13Q1W4C9 94 aa3.04□□□□□ -1.92
HMGN2P47-201ENST00000559378 H1FX-AS1Q4G0G2 97 aa3.04□□□□□ -1.92
HMGN2P47-201ENST00000559378 H0YGG7 62 aa3.03□□□□□ -1.92
HMGN2P47-201ENST00000559378 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
HMGN2P47-201ENST00000559378 COX14Q96I36 57 aa3.01□□□□□ -1.93
HMGN2P47-201ENST00000559378 GPR179Q6PRD1 2367 aa3□□□□□ -1.93
HMGN2P47-201ENST00000559378 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
HMGN2P47-201ENST00000559378 LYNX1P0DP58 116 aa3□□□□□ -1.93
HMGN2P47-201ENST00000559378 CLPSL2Q6UWE3 100 aa3□□□□□ -1.93
HMGN2P47-201ENST00000559378 DEFB123Q8N688 67 aa3□□□□□ -1.93
HMGN2P47-201ENST00000559378 TPRP12270 2363 aaKnown RBP3□□□□□ -1.93
HMGN2P47-201ENST00000559378 FLG2Q5D862 2391 aaPredicted RBP2.99□□□□□ -1.93
HMGN2P47-201ENST00000559378 DEFB130BP0DP73 79 aa2.99□□□□□ -1.93
HMGN2P47-201ENST00000559378 DEFB130AP0DP74 79 aa2.99□□□□□ -1.93
HMGN2P47-201ENST00000559378 KLK9Q2XQG4 91 aa2.99□□□□□ -1.93
HMGN2P47-201ENST00000559378 IGF2RP11717 2491 aa2.98□□□□□ -1.93
HMGN2P47-201ENST00000559378 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
HMGN2P47-201ENST00000559378 LELP1Q5T871 98 aa2.97□□□□□ -1.93
HMGN2P47-201ENST00000559378 ZDBF2Q9HCK1 2354 aa2.97□□□□□ -1.93
HMGN2P47-201ENST00000559378 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.94
HMGN2P47-201ENST00000559378 WNK2Q9Y3S1 2297 aa2.95□□□□□ -1.94
HMGN2P47-201ENST00000559378 DEFB105AQ8NG35 78 aa2.95□□□□□ -1.94
HMGN2P47-201ENST00000559378 APELAP0DMC3 54 aa2.94□□□□□ -1.94
HMGN2P47-201ENST00000559378 DEFB109BQ30KR1 87 aa2.93□□□□□ -1.94
HMGN2P47-201ENST00000559378 KRTAP9-3Q9BYQ3 159 aa2.92□□□□□ -1.94
HMGN2P47-201ENST00000559378 H3BUA1 57 aa2.91□□□□□ -1.94
HMGN2P47-201ENST00000559378 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
HMGN2P47-201ENST00000559378 FAM208BQ5VWN6 2430 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 K7EIL1 84 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 OTOGLQ3ZCN5 2332 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 BRD3OSQ6XYD6 125 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 PCNX1Q96RV3 2341 aa2.89□□□□□ -1.95
HMGN2P47-201ENST00000559378 SPRR1AP35321 89 aa2.86□□□□□ -1.95
HMGN2P47-201ENST00000559378 PTPRZ1P23471 2315 aaPredicted RBP2.86□□□□□ -1.95
HMGN2P47-201ENST00000559378 WNK1Q9H4A3 2382 aa2.85□□□□□ -1.95
HMGN2P47-201ENST00000559378 PRLHP81277 87 aa2.85□□□□□ -1.95
HMGN2P47-201ENST00000559378 SPTBN1Q01082 2364 aaKnown RBP2.85□□□□□ -1.95
HMGN2P47-201ENST00000559378 PKDREJQ9NTG1 2253 aa2.84□□□□□ -1.96
HMGN2P47-201ENST00000559378 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
HMGN2P47-201ENST00000559378 PIEZO2Q9H5I5 2752 aa2.81□□□□□ -1.96
HMGN2P47-201ENST00000559378 DEFB1P60022 68 aa2.81□□□□□ -1.96
HMGN2P47-201ENST00000559378 KRTAP10-9P60411 292 aa2.81□□□□□ -1.96
HMGN2P47-201ENST00000559378 KRTAP1-1Q07627 177 aa2.81□□□□□ -1.96
HMGN2P47-201ENST00000559378 APLNQ9ULZ1 77 aa2.81□□□□□ -1.96
HMGN2P47-201ENST00000559378 ATRXP46100 2492 aa2.8□□□□□ -1.96
HMGN2P47-201ENST00000559378 A0A1B0GVY2 172 aa2.79□□□□□ -1.96
HMGN2P47-201ENST00000559378 SPRR1BP22528 89 aa2.79□□□□□ -1.96
HMGN2P47-201ENST00000559378 DEFB110Q30KQ9 67 aa2.79□□□□□ -1.96
HMGN2P47-201ENST00000559378 S4R3F8 94 aa2.78□□□□□ -1.96
HMGN2P47-201ENST00000559378 JMJD1CQ15652 2540 aa2.77□□□□□ -1.97
HMGN2P47-201ENST00000559378 RHPN1-AS1Q9BWJ2 59 aa2.77□□□□□ -1.97
HMGN2P47-201ENST00000559378 AKAP6Q13023 2319 aa2.77□□□□□ -1.97
HMGN2P47-201ENST00000559378 SPINK1P00995 79 aa2.76□□□□□ -1.97
HMGN2P47-201ENST00000559378 PRO0255Q9UI72 69 aa2.75□□□□□ -1.97
HMGN2P47-201ENST00000559378 ROS1P08922 2347 aa2.74□□□□□ -1.97
HMGN2P47-201ENST00000559378 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
HMGN2P47-201ENST00000559378 DEFB119Q8N690 84 aa2.74□□□□□ -1.97
HMGN2P47-201ENST00000559378 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
HMGN2P47-201ENST00000559378 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
HMGN2P47-201ENST00000559378 KRTAP10-2P60368 255 aa2.73□□□□□ -1.97
HMGN2P47-201ENST00000559378 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
HMGN2P47-201ENST00000559378 ACACAQ13085 2346 aa2.73□□□□□ -1.97
HMGN2P47-201ENST00000559378 ZNF462Q96JM2 2506 aa2.72□□□□□ -1.97
HMGN2P47-201ENST00000559378 Q5VSD8 79 aa2.72□□□□□ -1.97
HMGN2P47-201ENST00000559378 SPTA1P02549 2419 aa2.71□□□□□ -1.98
HMGN2P47-201ENST00000559378 CACNA1GO43497 2377 aa2.71□□□□□ -1.98
HMGN2P47-201ENST00000559378 DEFB108BQ8NET1 73 aa2.71□□□□□ -1.98
HMGN2P47-201ENST00000559378 KRTAP10-11P60412 298 aa2.7□□□□□ -1.98
HMGN2P47-201ENST00000559378 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
HMGN2P47-201ENST00000559378 H3BUX3 64 aa2.69□□□□□ -1.98
HMGN2P47-201ENST00000559378 HTN1P15515 57 aa2.69□□□□□ -1.98
HMGN2P47-201ENST00000559378 HIVEP2P31629 2446 aa2.69□□□□□ -1.98
HMGN2P47-201ENST00000559378 SPTBN2O15020 2390 aa2.66□□□□□ -1.98
HMGN2P47-201ENST00000559378 DEFB103AP81534 67 aa2.66□□□□□ -1.98
HMGN2P47-201ENST00000559378 A0A0D9SG42 100 aa2.63□□□□□ -1.99
HMGN2P47-201ENST00000559378 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms