RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C22orf24Q9Y442 160 aa8.83□□□□□ -1
TPM1-215ENST00000558868 PRYO14603 147 aa8.82□□□□□ -1
TPM1-215ENST00000558868 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
TPM1-215ENST00000558868 LINC00575Q6W349 94 aa8.82□□□□□ -1
TPM1-215ENST00000558868 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
TPM1-215ENST00000558868 MRPL55Q7Z7F7 128 aaKnown RBP8.82□□□□□ -1
TPM1-215ENST00000558868 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
TPM1-215ENST00000558868 FAM168BA1KXE4 195 aa8.81□□□□□ -1
TPM1-215ENST00000558868 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
TPM1-215ENST00000558868 PPDPFLQ8WWR9 84 aa8.81□□□□□ -1
TPM1-215ENST00000558868 LINC00167Q96N53 147 aa8.81□□□□□ -1
TPM1-215ENST00000558868 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
TPM1-215ENST00000558868 hADV29S1A0JD25 119 aa8.8□□□□□ -1
TPM1-215ENST00000558868 H3BQ85 93 aa8.8□□□□□ -1
TPM1-215ENST00000558868 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
TPM1-215ENST00000558868 ORMDL1Q9P0S3 153 aa8.8□□□□□ -1
TPM1-215ENST00000558868 DNAH6Q9C0G6 4158 aa8.8□□□□□ -1
TPM1-215ENST00000558868 GHRHP01286 108 aa8.79□□□□□ -1
TPM1-215ENST00000558868 ALMS1Q8TCU4 4167 aa8.79□□□□□ -1
TPM1-215ENST00000558868 RTL8CO15255 209 aa8.78□□□□□ -1
TPM1-215ENST00000558868 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
TPM1-215ENST00000558868 INAFM2P0DMQ5 153 aa8.77□□□□□ -1.01
TPM1-215ENST00000558868 FRAS1Q86XX4 4008 aa8.77□□□□□ -1.01
TPM1-215ENST00000558868 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
TPM1-215ENST00000558868 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
TPM1-215ENST00000558868 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
TPM1-215ENST00000558868 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
TPM1-215ENST00000558868 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
TPM1-215ENST00000558868 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
TPM1-215ENST00000558868 TMEM256-PLSCR3K7ERE1 68 aa8.75□□□□□ -1.01
TPM1-215ENST00000558868 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.75□□□□□ -1.01
TPM1-215ENST00000558868 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
TPM1-215ENST00000558868 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
TPM1-215ENST00000558868 SPRR1AP35321 89 aa8.74□□□□□ -1.01
TPM1-215ENST00000558868 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
TPM1-215ENST00000558868 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
TPM1-215ENST00000558868 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
TPM1-215ENST00000558868 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
TPM1-215ENST00000558868 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
TPM1-215ENST00000558868 TNP2Q05952 138 aa8.72□□□□□ -1.01
TPM1-215ENST00000558868 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
TPM1-215ENST00000558868 LCE6AA0A183 80 aa8.71□□□□□ -1.02
TPM1-215ENST00000558868 B5MCH6 92 aa8.71□□□□□ -1.02
TPM1-215ENST00000558868 UBE2BP63146 152 aa8.71□□□□□ -1.02
TPM1-215ENST00000558868 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
TPM1-215ENST00000558868 KRTAP4-16G5E9R7 235 aaPredicted RBP8.7□□□□□ -1.02
TPM1-215ENST00000558868 Q6ZQY7 126 aa8.7□□□□□ -1.02
TPM1-215ENST00000558868 Q6ZRX8 168 aa8.7□□□□□ -1.02
TPM1-215ENST00000558868 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
TPM1-215ENST00000558868 JMJD7-PLA2G4BH0Y9G9 81 aa8.69□□□□□ -1.02
TPM1-215ENST00000558868 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
TPM1-215ENST00000558868 HECTD4Q9Y4D8 3996 aa8.67□□□□□ -1.02
TPM1-215ENST00000558868 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
TPM1-215ENST00000558868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
TPM1-215ENST00000558868 KMT2AQ03164 3969 aa8.66□□□□□ -1.02
TPM1-215ENST00000558868 PANO1I0J062 215 aa8.65□□□□□ -1.02
TPM1-215ENST00000558868 VPS25Q9BRG1 176 aa8.65□□□□□ -1.02
TPM1-215ENST00000558868 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
TPM1-215ENST00000558868 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
TPM1-215ENST00000558868 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
TPM1-215ENST00000558868 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
TPM1-215ENST00000558868 H0Y9J4 135 aa8.63□□□□□ -1.03
TPM1-215ENST00000558868 ACYP1P07311 99 aa8.63□□□□□ -1.03
TPM1-215ENST00000558868 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
TPM1-215ENST00000558868 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
TPM1-215ENST00000558868 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
TPM1-215ENST00000558868 Q9BRP9 147 aa8.62□□□□□ -1.03
TPM1-215ENST00000558868 DNAH17Q9UFH2 4485 aa8.62□□□□□ -1.03
TPM1-215ENST00000558868 C21orf62-AS1Q17RA5 79 aa8.61□□□□□ -1.03
TPM1-215ENST00000558868 BCE1O60756 84 aa8.6□□□□□ -1.03
TPM1-215ENST00000558868 KRTAP10-2P60368 255 aa8.6□□□□□ -1.03
TPM1-215ENST00000558868 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
TPM1-215ENST00000558868 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
TPM1-215ENST00000558868 PDE6GP18545 87 aa8.59□□□□□ -1.03
TPM1-215ENST00000558868 UBE2AP49459 152 aa8.59□□□□□ -1.03
TPM1-215ENST00000558868 NDUFV3P56181 108 aaKnown RBP8.59□□□□□ -1.03
TPM1-215ENST00000558868 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
TPM1-215ENST00000558868 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
TPM1-215ENST00000558868 DSCR8Q96T75 97 aa8.58□□□□□ -1.04
TPM1-215ENST00000558868 HERC1Q15751 4861 aa8.58□□□□□ -1.04
TPM1-215ENST00000558868 PRLHP81277 87 aa8.57□□□□□ -1.04
TPM1-215ENST00000558868 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
TPM1-215ENST00000558868 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
TPM1-215ENST00000558868 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
TPM1-215ENST00000558868 LOC110117498A0A087WWA1 95 aa8.56□□□□□ -1.04
TPM1-215ENST00000558868 Q8N377 158 aa8.56□□□□□ -1.04
TPM1-215ENST00000558868 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
TPM1-215ENST00000558868 CCKP06307 115 aa8.55□□□□□ -1.04
TPM1-215ENST00000558868 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
TPM1-215ENST00000558868 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
TPM1-215ENST00000558868 A0A1B0GV72 72 aa8.54□□□□□ -1.04
TPM1-215ENST00000558868 Q6ZSA8 131 aa8.53□□□□□ -1.04
TPM1-215ENST00000558868 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
TPM1-215ENST00000558868 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
TPM1-215ENST00000558868 KRTAP10-1P60331 282 aa8.51□□□□□ -1.05
TPM1-215ENST00000558868 Q6ZQT0 140 aa8.51□□□□□ -1.05
TPM1-215ENST00000558868 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
TPM1-215ENST00000558868 SIGMAR1Q99720 223 aa8.51□□□□□ -1.05
TPM1-215ENST00000558868 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
TPM1-215ENST00000558868 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms