RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 TRIOBPQ9H2D6 2365 aa1.7□□□□□ -2.14
SMARCE1P4-201ENST00000523647 COX6B1P14854 86 aa1.69□□□□□ -2.14
SMARCE1P4-201ENST00000523647 CRIP1P50238 77 aa1.69□□□□□ -2.14
SMARCE1P4-201ENST00000523647 MRPL34Q9BQ48 92 aaKnown RBP1.69□□□□□ -2.14
SMARCE1P4-201ENST00000523647 GOLGA4Q13439 2230 aaKnown RBP1.68□□□□□ -2.14
SMARCE1P4-201ENST00000523647 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
SMARCE1P4-201ENST00000523647 NAV3Q8IVL0 2385 aa1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 DDX60LQ5H9U9 1706 aaKnown RBP1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 SMIM27A0A1W2PRY6 76 aa1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 COX6A2Q02221 97 aa1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 ABRACLQ9P1F3 81 aa1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 FAM208BQ5VWN6 2430 aa1.67□□□□□ -2.14
SMARCE1P4-201ENST00000523647 LINC01546A6NGU7 62 aa1.66□□□□□ -2.14
SMARCE1P4-201ENST00000523647 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SMARCE1P4-201ENST00000523647 KRTAP21-3Q3LHN1 58 aa1.65□□□□□ -2.15
SMARCE1P4-201ENST00000523647 Q6ZSA8 131 aa1.65□□□□□ -2.15
SMARCE1P4-201ENST00000523647 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
SMARCE1P4-201ENST00000523647 RP1L1Q8IWN7 2480 aaPredicted RBP1.64□□□□□ -2.15
SMARCE1P4-201ENST00000523647 TNRC6CQ9HCJ0 1690 aaKnown RBP1.64□□□□□ -2.15
SMARCE1P4-201ENST00000523647 CCL22O00626 93 aa1.63□□□□□ -2.15
SMARCE1P4-201ENST00000523647 ASH1LQ9NR48 2969 aaKnown RBP1.62□□□□□ -2.15
SMARCE1P4-201ENST00000523647 A0A0D9SG42 100 aa1.62□□□□□ -2.15
SMARCE1P4-201ENST00000523647 H0YGX0 51 aa1.62□□□□□ -2.15
SMARCE1P4-201ENST00000523647 Q8IZM0 81 aa1.61□□□□□ -2.15
SMARCE1P4-201ENST00000523647 CACNA1EQ15878 2313 aa1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 NDUFA3O95167 84 aa1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 PRO0255Q9UI72 69 aa1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 FAM208AQ9UK61 1670 aaKnown RBP1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.15
SMARCE1P4-201ENST00000523647 SORL1Q92673 2214 aa1.59□□□□□ -2.15
SMARCE1P4-201ENST00000523647 LYNX1G3V0Z9 82 aa1.59□□□□□ -2.15
SMARCE1P4-201ENST00000523647 KRTAP10-4P60372 401 aaPredicted RBP1.59□□□□□ -2.15
SMARCE1P4-201ENST00000523647 BPTFQ12830 3046 aa1.58□□□□□ -2.16
SMARCE1P4-201ENST00000523647 SPRR1AP35321 89 aa1.58□□□□□ -2.16
SMARCE1P4-201ENST00000523647 LINC00158P58513 81 aa1.58□□□□□ -2.16
SMARCE1P4-201ENST00000523647 Q5VSD8 79 aa1.58□□□□□ -2.16
SMARCE1P4-201ENST00000523647 PRO3102Q9H379 93 aa1.58□□□□□ -2.16
SMARCE1P4-201ENST00000523647 PRB3Q04118 309 aaPredicted RBP1.57□□□□□ -2.16
SMARCE1P4-201ENST00000523647 DEPDC5O75140 1603 aa1.57□□□□□ -2.16
SMARCE1P4-201ENST00000523647 CNOT1A5YKK6 2376 aaKnown RBP1.55□□□□□ -2.16
SMARCE1P4-201ENST00000523647 H0YAA0 97 aa1.55□□□□□ -2.16
SMARCE1P4-201ENST00000523647 LELP1Q5T871 98 aa1.55□□□□□ -2.16
SMARCE1P4-201ENST00000523647 TOGARAM1Q9Y4F4 1720 aa1.54□□□□□ -2.16
SMARCE1P4-201ENST00000523647 LOC730098B7Z3J9 87 aa1.54□□□□□ -2.16
SMARCE1P4-201ENST00000523647 TRPM2O94759 1503 aa1.54□□□□□ -2.16
SMARCE1P4-201ENST00000523647 ROS1P08922 2347 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 ATP7AQ04656 1500 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 C4AP0C0L4 1744 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 C4BP0C0L5 1744 aa1.52□□□□□ -2.17
SMARCE1P4-201ENST00000523647 H1FX-AS1Q4G0G2 97 aa1.51□□□□□ -2.17
SMARCE1P4-201ENST00000523647 NFAT5O94916 1531 aa1.5□□□□□ -2.17
SMARCE1P4-201ENST00000523647 SPRR1BP22528 89 aa1.5□□□□□ -2.17
SMARCE1P4-201ENST00000523647 SPINK4O60575 86 aa1.49□□□□□ -2.17
SMARCE1P4-201ENST00000523647 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
SMARCE1P4-201ENST00000523647 LINC00308Q8TCZ7 52 aa1.49□□□□□ -2.17
SMARCE1P4-201ENST00000523647 APLNQ9ULZ1 77 aa1.49□□□□□ -2.17
SMARCE1P4-201ENST00000523647 TIMM8BQ9Y5J9 83 aaPredicted RBP1.48□□□□□ -2.17
SMARCE1P4-201ENST00000523647 DOPEY2Q9Y3R5 2298 aa1.48□□□□□ -2.17
SMARCE1P4-201ENST00000523647 ALMS1Q8TCU4 4167 aa1.48□□□□□ -2.17
SMARCE1P4-201ENST00000523647 IQGAP1P46940 1657 aa1.48□□□□□ -2.17
SMARCE1P4-201ENST00000523647 PTPRZ1P23471 2315 aaPredicted RBP1.48□□□□□ -2.17
SMARCE1P4-201ENST00000523647 SAMD9LQ8IVG5 1584 aa1.47□□□□□ -2.17
SMARCE1P4-201ENST00000523647 DDX60Q8IY21 1712 aaKnown RBP1.47□□□□□ -2.17
SMARCE1P4-201ENST00000523647 CRCT1Q9UGL9 99 aa1.47□□□□□ -2.17
SMARCE1P4-201ENST00000523647 WFDC13Q8IUB5 93 aa1.46□□□□□ -2.18
SMARCE1P4-201ENST00000523647 MINOS1Q5TGZ0 78 aa1.45□□□□□ -2.18
SMARCE1P4-201ENST00000523647 PLCE1Q9P212 2302 aa1.44□□□□□ -2.18
SMARCE1P4-201ENST00000523647 PTPRQQ9UMZ3 2332 aa1.44□□□□□ -2.18
SMARCE1P4-201ENST00000523647 LMO7Q8WWI1 1683 aa1.44□□□□□ -2.18
SMARCE1P4-201ENST00000523647 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
SMARCE1P4-201ENST00000523647 MEGF8Q7Z7M0 2845 aa1.43□□□□□ -2.18
SMARCE1P4-201ENST00000523647 C6orf48Q9UBA6 75 aa1.43□□□□□ -2.18
SMARCE1P4-201ENST00000523647 CDC42BPAQ5VT25 1732 aa1.43□□□□□ -2.18
SMARCE1P4-201ENST00000523647 C2CD3Q4AC94 2353 aa1.42□□□□□ -2.18
SMARCE1P4-201ENST00000523647 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
SMARCE1P4-201ENST00000523647 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
SMARCE1P4-201ENST00000523647 IAPPP10997 89 aa1.41□□□□□ -2.18
SMARCE1P4-201ENST00000523647 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
SMARCE1P4-201ENST00000523647 RPS27P42677 84 aaKnown RBP1.4□□□□□ -2.19
SMARCE1P4-201ENST00000523647 RPS27LQ71UM5 84 aaKnown RBP1.4□□□□□ -2.19
SMARCE1P4-201ENST00000523647 KIF21BO75037 1637 aa1.4□□□□□ -2.19
SMARCE1P4-201ENST00000523647 KLK9Q2XQG4 91 aa1.39□□□□□ -2.19
SMARCE1P4-201ENST00000523647 SNRPGP62308 76 aaKnown RBP1.38□□□□□ -2.19
SMARCE1P4-201ENST00000523647 TFF3Q07654 80 aa1.38□□□□□ -2.19
SMARCE1P4-201ENST00000523647 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
SMARCE1P4-201ENST00000523647 CACNA1HO95180 2353 aa1.37□□□□□ -2.19
SMARCE1P4-201ENST00000523647 ZNF462Q96JM2 2506 aa1.36□□□□□ -2.19
SMARCE1P4-201ENST00000523647 REV3LO60673 3130 aa1.36□□□□□ -2.19
SMARCE1P4-201ENST00000523647 SPTBN2O15020 2390 aa1.36□□□□□ -2.19
SMARCE1P4-201ENST00000523647 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
SMARCE1P4-201ENST00000523647 ZNF292O60281 2723 aa1.33□□□□□ -2.2
SMARCE1P4-201ENST00000523647 HELZ2Q9BYK8 2649 aaKnown RBP1.32□□□□□ -2.2
SMARCE1P4-201ENST00000523647 NDUFA1O15239 70 aa1.32□□□□□ -2.2
SMARCE1P4-201ENST00000523647 WT1-ASQ06250 92 aa1.32□□□□□ -2.2
SMARCE1P4-201ENST00000523647 CHD9Q3L8U1 2897 aa1.31□□□□□ -2.2
SMARCE1P4-201ENST00000523647 WNK2Q9Y3S1 2297 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms